Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 2.2e-263 911.8 460 100.0
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 6.7e-196 687.6 450 72.4
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 2.2e-183 646.0 458 68.6
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 2.7e-181 639.0 450 68.0
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 3.0e-180 635.6 450 68.2
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 1.7e-178 629.8 451 65.9
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 2.6e-176 622.5 443 68.2
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 1.1e-174 617.1 449 65.7
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 1.1e-174 617.1 449 65.7
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 1.5e-174 616.7 449 65.7
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 3.2e-174 615.5 450 66.0
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 2.7e-173 612.5 450 66.0
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 3.6e-173 612.1 449 65.7
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 3.6e-173 612.1 451 64.7
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.8e-172 609.8 449 64.6
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 5.2e-172 608.2 449 64.8
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 4.4e-171 605.1 450 66.2
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 4.4e-171 605.1 455 64.4
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 3.7e-170 602.1 448 64.1
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 1.4e-169 600.1 452 63.9
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 3.1e-169 599.0 449 63.5
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 2.7e-168 595.9 451 63.4
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 4.5e-168 595.1 454 63.4
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 5.9e-168 594.7 451 63.2
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 1.7e-167 593.2 450 63.1
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 3.8e-167 592.0 447 64.4
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 5.5e-166 588.2 451 64.5
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 7.2e-166 587.8 451 62.1
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 1.2e-165 587.0 465 61.5
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 1.6e-165 586.6 450 63.1
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 2.1e-165 586.3 451 61.9
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 2.7e-165 585.9 448 62.7
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 2.7e-165 585.9 451 62.1
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 1.8e-164 583.2 449 63.9
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 1.2e-163 580.5 448 59.8
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 2.6e-163 579.3 451 61.6
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 4.4e-163 578.6 449 62.1
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 4.4e-163 578.6 449 62.1
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 5.7e-163 578.2 451 61.4
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 2.2e-162 576.2 450 60.4
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 2.8e-162 575.9 450 62.7
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 6.3e-162 574.7 447 62.9
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.8e-161 573.2 518 56.4
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 3.1e-161 572.4 450 62.4
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 3.1e-161 572.4 499 58.3
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 5.4e-161 571.6 450 61.8
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 2.0e-160 569.7 449 62.1
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 2.7e-160 569.3 449 61.7
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 1.3e-159 567.0 447 62.2
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 1.3e-159 567.0 450 61.6
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 1.3e-159 567.0 451 61.0
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 5.5e-158 561.6 449 60.6
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 1.2e-157 560.5 553 52.6
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 6.1e-157 558.1 455 60.0
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 8.8e-156 554.3 449 60.4
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 1.2e-155 553.9 446 60.1
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 6.3e-154 548.1 451 57.2
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 8.3e-154 547.7 451 57.9
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 2.4e-153 546.2 452 57.3
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 7.7e-152 541.2 449 58.6
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 2.9e-151 539.3 425 61.2
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 4.3e-150 535.4 452 56.4
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 5.6e-150 535.0 452 57.1
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 3.6e-149 532.3 452 57.1
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 8.0e-149 531.2 390 65.1
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 8.0e-149 531.2 462 55.6
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 1.4e-148 530.4 425 60.0
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 1.7e-146 523.5 449 55.9
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.7e-146 523.5 449 55.9
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 3.7e-146 522.3 452 55.5
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 4.9e-146 521.9 452 55.3
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 4.9e-146 521.9 451 55.7
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 4.9e-146 521.9 452 55.3
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 6.4e-146 521.5 452 55.3
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 8.3e-146 521.2 452 55.5
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 2.4e-145 519.6 451 55.2
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 2.4e-145 519.6 395 62.5
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 7.0e-145 518.1 449 55.5
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 1.2e-144 517.3 427 60.0
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 2.0e-144 516.5 449 55.7
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 3.5e-144 515.8 450 54.0
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 4.6e-144 515.4 449 55.5
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 7.8e-144 514.6 466 53.9
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 6.6e-143 511.5 388 63.4
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 3.3e-142 509.2 433 59.6
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 1.2e-141 507.3 441 59.6
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 4.1e-137 492.3 457 56.5
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 2.2e-130 469.9 400 58.2
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 2.7e-128 463.0 386 57.5
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 5.1e-127 458.8 457 50.8
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 1.2e-125 454.1 393 57.5
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 9.6e-118 427.9 448 50.0
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 6.9e-116 421.8 458 51.5
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 2.9e-114 416.4 399 50.4
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 5.6e-110 402.1 334 60.5
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 3.6e-109 399.4 308 60.7
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 7.6e-107 391.7 296 64.2
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 1.6e-101 374.0 310 59.4
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 4.5e-99 365.9 248 71.4
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 4.5e-99 365.9 248 71.4
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.4e-89 334.3 310 52.9
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 1.8e-84 317.4 454 39.4
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 5.7e-70 269.2 398 39.4
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 2.4e-60 237.3 206 59.7
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 4.5e-59 233.0 211 54.5
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 4.5e-59 233.0 183 63.9
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 1.7e-34 151.4 108 68.5
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 1.1e-25 122.1 93 63.4
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 3.6e-16 90.5 66 63.6
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 4.0e-15 87.0 66 62.1
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 1.4e-12 78.6 78 50.0


User provided reference genes

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