Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00480 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 1.6e-105 387.9 200 100.0
Aqoxy2G01348 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 2.8e-46 191.0 100 94.0
TAR622G0770 Trochodendron aralioides HOM05D007763 ORTHO05D009537 4.8e-46 190.3 198 53.0
GSVIVG01007974001 Vitis vinifera HOM05D007763 ORTHO05D010304 2.6e-44 184.5 197 51.8
Hma1.2p1_0060F.1_g033520 Hydrangea macrophylla HOM05D007763 ORTHO05D009537 3.2e-42 177.6 151 59.6
Dinv38739 Davidia involucrata HOM05D007763 ORTHO05D001128 5.5e-42 176.8 199 50.3
Nn2g12476 Nelumbo nucifera HOM05D007763 ORTHO05D009537 5.5e-42 176.8 175 52.6
QL10p017571 Quercus lobata HOM05D007763 ORTHO05D009537 3.6e-41 174.1 153 54.2
PSO017G0499 Papaver somniferum HOM05D007763 ORTHO05D009537 1.3e-38 165.6 182 52.2
Actinidia04871 Actinidia chinensis HOM05D007763 ORTHO05D009537 2.2e-38 164.9 200 47.5
Lj9C466T13 Lonicera japonica HOM05D007763 ORTHO05D009537 2.2e-38 164.9 181 49.7
Atru.chr12.1670 Acer truncatum HOM05D007763 ORTHO05D009537 1.1e-37 162.5 149 52.3
Haze_07298 Corylus avellana HOM05D007763 ORTHO05D010304 1.2e-36 159.1 192 46.4
Rhsim08G0152400 Rhododendron simsii HOM05D000001 ORTHO05D010304 3.4e-36 157.5 200 47.0
Ciclev10024595m.g Citrus clementina HOM05D007763 ORTHO05D009537 4.5e-36 157.1 211 44.1
Thecc.03G093400 Theobroma cacao HOM05D007763 ORTHO05D009537 4.5e-36 157.1 168 49.4
COL.COLO4_36930 Corchorus olitorius HOM05D007763 ORTHO05D009537 3.8e-35 154.1 148 51.4
CSS0022156 Camellia sinensis var. sinensis HOM05D007763 ORTHO05D009537 5.0e-35 153.7 197 45.2
Duzib205G0970 Durio zibethinus HOM05D007763 ORTHO05D009537 5.0e-35 153.7 169 45.6
Manes.14G081200 Manihot esculenta HOM05D007763 ORTHO05D009537 5.5e-34 150.2 178 48.9
Cfa018915 Carpinus fangiana HOM05D007763 ORTHO05D009537 1.2e-33 149.1 194 44.8
Migut.I00207 Erythranthe guttata HOM05D007763 ORTHO05D009537 1.6e-33 148.7 175 45.7
CDE04G3021 Ceratophyllum demersum HOM05D007763 ORTHO05D000003 2.7e-33 147.9 190 41.1
AUR62021645 Chenopodium quinoa HOM05D007763 ORTHO05D009537 3.9e-32 144.1 167 47.3
Gohir.A03G067600 Gossypium hirsutum HOM05D007763 ORTHO05D009537 1.1e-31 142.5 171 42.1
FvH4_5g14610 Fragaria vesca HOM05D007763 ORTHO05D009537 1.5e-31 142.1 149 48.3
FAN13G0255 Fragaria x ananassa HOM05D007763 ORTHO05D009537 2.0e-31 141.7 167 45.5
FAN18G1924 Fragaria x ananassa HOM05D007763 ORTHO05D009537 2.6e-31 141.4 167 45.5
RcHm_v2.0_Chr7g0181881 Rosa chinensis HOM05D007763 ORTHO05D009537 2.6e-31 141.4 193 43.5
Gorai.003G098200 Gossypium raimondii HOM05D007763 ORTHO05D009537 4.4e-31 140.6 180 40.0
SGA_v2.0_scaffold25G10931 Striga asiatica HOM05D007763 ORTHO05D009537 4.4e-31 140.6 184 43.5
Gohir.D03G094100 Gossypium hirsutum HOM05D007763 ORTHO05D009537 5.7e-31 140.2 171 40.9
Sc12g0006490 Simmondsia chinensis HOM05D007763 ORTHO05D009537 9.7e-31 139.4 182 45.1
MSTRG.11374 Avicennia marina HOM05D007763 ORTHO05D009537 2.4e-29 134.8 198 38.9
Lsat_1_v5_gn_5_21540 Lactuca sativa HOM05D007763 ORTHO05D009537 2.4e-29 134.8 143 46.2
Prupe.5G197300 Prunus persica HOM05D007763 ORTHO05D009537 2.0e-28 131.7 149 43.6
TWI60G1313 Tripterygium wilfordii HOM05D007763 ORTHO05D009537 3.5e-28 131.0 187 43.3
THA.LOC104801471 Tarenaya hassleriana HOM05D007763 ORTHO05D009537 6.5e-27 126.7 187 39.6
Ah.02g113700 Amaranthus hybridus HOM05D007763 ORTHO05D009537 8.5e-27 126.3 169 43.8
HanXRQChr08g0236691 Helianthus annuus HOM05D007763 ORTHO05D009537 2.5e-26 124.8 152 42.8
Cc04_g15160 Coffea canephora HOM05D007763 ORTHO05D009537 3.2e-26 124.4 179 39.1
ATR1127G168 Amborella trichopoda HOM05D007763 ORTHO05D009537 2.1e-25 121.7 169 40.2
PGR031G2821 Punica granatum HOM05D007763 ORTHO05D009537 3.6e-25 120.9 184 41.3
ClCG09G020450 Citrullus lanatus HOM05D007763 ORTHO05D009537 1.4e-24 119.0 152 41.4
AT5G61400 Arabidopsis thaliana HOM05D007763 ORTHO05D009537 5.2e-24 117.1 190 38.4
Sed0000161 Sechium edule HOM05D007763 ORTHO05D009537 3.3e-23 114.4 185 39.5
Carub.0008s2207 Capsella rubella HOM05D007763 ORTHO05D009537 7.4e-23 113.2 175 39.4
CARHR275160 Cardamine hirsuta HOM05D007763 ORTHO05D009537 9.7e-23 112.8 194 38.7
AL8G38070 Arabidopsis lyrata HOM05D007763 ORTHO05D009537 2.8e-22 111.3 193 36.3
EL10Ac5g11053 Beta vulgaris HOM05D014602 ORTHO05D009537 1.4e-21 109.0 103 52.4
AUR62008445 Chenopodium quinoa HOM05D007763 ORTHO05D009537 1.8e-21 108.6 152 40.1
BcaC04g23450 Brassica carinata HOM05D007763 ORTHO05D009537 2.4e-21 108.2 148 41.9
BcaNung06902 Brassica carinata HOM05D007763 ORTHO05D009537 2.4e-21 108.2 150 41.3
C09p08190 Brassica napus HOM05D007763 ORTHO05D009537 2.4e-21 108.2 148 41.9
BolC9t53731H Brassica oleracea HOM05D007763 ORTHO05D009537 2.4e-21 108.2 148 41.9
CsaV3_5G025970 Cucumis sativus L. HOM05D007763 ORTHO05D009537 1.6e-20 105.5 151 39.1
MELO3C025502.2 Cucumis melo HOM05D007763 ORTHO05D009537 2.0e-20 105.1 151 37.7
DCAR_002300 Daucus carota HOM05D007763 ORTHO05D009537 2.6e-20 104.8 105 45.7
Aa31LG11G2020 Aethionema arabicum HOM05D007763 ORTHO05D009537 1.3e-19 102.4 152 37.5
BraA09t36381Z Brassica rapa HOM05D007763 ORTHO05D009537 1.7e-19 102.1 149 41.6
Thhalv10005336m.g Eutrema salsugineum HOM05D007763 ORTHO05D009537 3.8e-19 100.9 178 33.1
Oeu052450.2 Olea europaea HOM05D007763 ORTHO05D009537 3.8e-19 100.9 105 45.7
Sopen06g027000 Solanum pennellii HOM05D007763 ORTHO05D009537 2.5e-18 98.2 116 45.7
Solyc06g069700.4 Solanum lycopersicum HOM05D007763 ORTHO05D009537 6.1e-17 93.6 151 41.1
MBI02_g14230_MAGBIO Magnolia biondii HOM05D007763 ORTHO05D011706 3.0e-16 91.3 120 42.5
Phvul.009G185566 Phaseolus vulgaris HOM05D007763 ORTHO05D009537 1.2e-15 89.4 116 42.2
LjContig00102g0005353 Lotus japonicus HOM05D000001 ORTHO05D010304 4.4e-15 87.4 92 44.6
BcaC04g23452 Brassica carinata HOM05D007763 ORTHO05D009537 2.4e-13 81.6 92 45.7
SEGI_07640 Sequoiadendron giganteum HOM05D007763 ORTHO05D009537 2.4e-13 81.6 157 31.8
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 2.7e-12 78.2 170 28.8
TPR.G11825 Trifolium pratense HOM05D007763 ORTHO05D009537 1.7e-11 75.5 135 35.6
Hund02629 Selenicereus undatus HOM05D007763 ORTHO05D019789 5.0e-11 73.9 52 59.6
CAN.G587.9 Capsicum annuum HOM05D007763 ORTHO05D009537 8.5e-11 73.2 144 38.2
Peaxi162Scf00013g00410 Petunia axillaris HOM05D007763 ORTHO05D009537 3.2e-10 71.2 95 38.9
AUR62022372 Chenopodium quinoa HOM05D007639 ORTHO05D009509 5.5e-10 70.5 142 31.7
HanXRQChr17g0557061 Helianthus annuus HOM05D007639 ORTHO05D009509 5.5e-10 70.5 138 29.0
Psat1g055280 Pisum sativum HOM05D007358 ORTHO05D009117 5.5e-10 70.5 158 27.2
Ah.04g165440 Amaranthus hybridus HOM05D007639 ORTHO05D009509 7.2e-10 70.1 142 30.3
arahy.Tifrunner.gnm1.ann1.NWYI6Z Arachis hypogaea HOM05D000001 ORTHO05D010304 1.6e-09 68.9 104 42.3
arahy.Tifrunner.gnm1.ann1.PFL66H Arachis hypogaea HOM05D007763 ORTHO05D009537 1.6e-09 68.9 104 41.3
AUR62034326 Chenopodium quinoa HOM05D007639 ORTHO05D009509 1.6e-09 68.9 142 30.3
FvH4_2g40380 Fragaria vesca HOM05D007639 ORTHO05D009509 2.1e-09 68.6 171 29.2
Ca_14664_v3 Cicer arietinum L. HOM05D007763 ORTHO05D009537 3.6e-09 67.8 118 35.6
Oeu009601.2 Olea europaea HOM05D007639 ORTHO05D009509 3.6e-09 67.8 155 26.5
BolC4t26320H Brassica oleracea HOM05D007358 ORTHO05D009117 4.7e-09 67.4 144 29.2
Phvul.004G009341 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 4.7e-09 67.4 202 25.2
Phvul.004G009945 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 4.7e-09 67.4 205 25.9
Phvul.004G009809 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 6.1e-09 67.0 202 25.2
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 8.0e-09 66.6 138 27.5
Gorai.009G205400 Gossypium raimondii HOM05D007639 ORTHO05D009509 8.0e-09 66.6 137 33.6
SEGI_21536 Sequoiadendron giganteum HOM05D007639 ORTHO05D009509 8.0e-09 66.6 159 28.9
Lalb_Chr24g0394951 Lupinus albus HOM05D007358 ORTHO05D009117 1.0e-08 66.2 224 26.3
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 1.4e-08 65.9 141 28.4
Zm00001eb312410 Zea mays HOM05D007763 ORTHO05D009537 1.4e-08 65.9 121 32.2
Gohir.D05G200100 Gossypium hirsutum HOM05D007639 ORTHO05D009509 1.8e-08 65.5 137 32.8
Phvul.004G009900 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 1.8e-08 65.5 202 25.2
Cpa.g.sc207.2 Carica papaya HOM05D007639 ORTHO05D009509 2.3e-08 65.1 122 32.0
Haze_17619 Corylus avellana HOM05D007639 ORTHO05D009509 2.3e-08 65.1 129 29.5
Nitab4.5_0004286g0010 Nicotiana tabacum HOM05D007763 ORTHO05D009537 2.3e-08 65.1 51 49.0
Atru.BG.247.p Acer truncatum HOM05D007639 ORTHO05D009509 3.0e-08 64.7 124 32.3
CiPaw.15G071600 Carya illinoinensis HOM05D007639 ORTHO05D009509 4.0e-08 64.3 130 29.2
SEGI_33147 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 4.0e-08 64.3 144 29.9
A08p29890 Brassica napus HOM05D007639 ORTHO05D009509 5.2e-08 63.9 141 29.1
C04p47210 Brassica napus HOM05D007358 ORTHO05D009117 5.2e-08 63.9 144 28.5
Duzib093G1018 Durio zibethinus HOM05D007639 ORTHO05D009509 5.2e-08 63.9 120 31.7
Phvul.003G017200 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 5.2e-08 63.9 205 25.4
Potri.014G040200 Populus trichocarpa HOM05D007639 ORTHO05D009509 5.2e-08 63.9 124 30.6
TAR625G1528 Trochodendron aralioides HOM05D007639 ORTHO05D009509 5.2e-08 63.9 120 28.3
Aa31LG9G1210 Aethionema arabicum HOM05D007358 ORTHO05D009117 6.8e-08 63.5 145 26.9
Nitab4.5_0003021g0070 Nicotiana tabacum HOM05D007763 ORTHO05D009537 6.8e-08 63.5 46 54.3
RcHm_v2.0_Chr2g0173011 Rosa chinensis HOM05D007358 ORTHO05D009117 6.8e-08 63.5 145 26.2
BraA08t34924Z Brassica rapa HOM05D007639 ORTHO05D009509 8.8e-08 63.2 141 28.4
Aqoxy3G01152 Aquilegia oxysepala HOM05D007358 ORTHO05D009117 1.2e-07 62.8 142 25.4
Cfa018449 Carpinus fangiana HOM05D007639 ORTHO05D009509 1.2e-07 62.8 120 30.8
Prupe.1G585600 Prunus persica HOM05D007639 ORTHO05D009509 1.2e-07 62.8 137 28.5
CAN.G371.124 Capsicum annuum HOM05D007639 ORTHO05D009509 1.5e-07 62.4 139 27.3
COL.COLO4_29095 Corchorus olitorius HOM05D007358 ORTHO05D009117 1.5e-07 62.4 122 32.0
Hma1.2p1_0013F.1_g008830 Hydrangea macrophylla HOM05D007358 ORTHO05D009117 1.5e-07 62.4 143 25.2
Nn4g24966 Nelumbo nucifera HOM05D007639 ORTHO05D009509 1.5e-07 62.4 142 26.8
Psat5g201000 Pisum sativum HOM05D007763 ORTHO05D009537 2.0e-07 62.0 66 37.9
BcaC07g38995 Brassica carinata HOM05D007639 ORTHO05D009509 2.6e-07 61.6 141 27.0
BolC8t49556H Brassica oleracea HOM05D007639 ORTHO05D009509 2.6e-07 61.6 141 27.0
Dinv39377 Davidia involucrata HOM05D007639 ORTHO05D009509 2.6e-07 61.6 120 27.5
Peaxi162Scf00057g00149 Petunia axillaris HOM05D000909 ORTHO05D009509 3.4e-07 61.2 139 30.2
RcHm_v2.0_Chr6g0300361 Rosa chinensis HOM05D007639 ORTHO05D009509 3.4e-07 61.2 150 26.7
THA.LOC104805375 Tarenaya hassleriana HOM05D007358 ORTHO05D009117 3.4e-07 61.2 144 27.8
Ciclev10003562m.g Citrus clementina HOM05D007639 ORTHO05D009509 4.4e-07 60.8 128 26.6
MD15G1444300 Malus domestica HOM05D007639 ORTHO05D009509 4.4e-07 60.8 140 28.6
PGR031G3090 Punica granatum HOM05D007639 ORTHO05D009509 4.4e-07 60.8 143 26.6
QL09p028535 Quercus lobata HOM05D007639 ORTHO05D009509 4.4e-07 60.8 126 27.0
SHI25578 Sapria himalayana HOM05D007639 ORTHO05D009509 4.4e-07 60.8 140 29.3
CSS0026781 Camellia sinensis var. sinensis HOM05D007639 ORTHO05D009509 5.7e-07 60.5 122 27.0
CSS0043455 Camellia sinensis var. sinensis HOM05D007639 ORTHO05D009509 5.7e-07 60.5 122 27.0
Carub.0005s0122 Capsella rubella HOM05D007496 ORTHO05D009479 5.7e-07 60.5 139 29.5
ClCG01G007050 Citrullus lanatus HOM05D007496 ORTHO05D009479 5.7e-07 60.5 147 30.6
Sed0007352 Sechium edule HOM05D007639 ORTHO05D009509 5.7e-07 60.5 118 29.7
vmacro04826 Vaccinium macrocarpon HOM05D007639 ORTHO05D009509 5.7e-07 60.5 144 27.8
vmacro04988 Vaccinium macrocarpon HOM05D007639 ORTHO05D009509 5.7e-07 60.5 144 27.8
GSVIVG01009638001 Vitis vinifera HOM05D007639 ORTHO05D009509 5.7e-07 60.5 121 27.3
BcaB03g12921 Brassica carinata HOM05D007639 ORTHO05D009509 7.5e-07 60.1 157 28.0
C08p19350 Brassica napus HOM05D007639 ORTHO05D009509 7.5e-07 60.1 141 27.0
MD09G1028300 Malus domestica HOM05D007358 ORTHO05D009117 7.5e-07 60.1 132 26.5
Manes.05G164100 Manihot esculenta HOM05D007639 ORTHO05D009509 7.5e-07 60.1 117 30.8
Cc09_g03920 Coffea canephora HOM05D007358 ORTHO05D009117 1.3e-06 59.3 143 27.3
CsaV3_3G044860 Cucumis sativus L. HOM05D007639 ORTHO05D009509 1.3e-06 59.3 138 26.8
SEGI_29272 Sequoiadendron giganteum HOM05D007291 ORTHO05D009038 1.7e-06 58.9 194 25.8
THA.LOC104813851 Tarenaya hassleriana HOM05D007639 ORTHO05D009509 1.7e-06 58.9 141 23.4
MELO3C003888.2 Cucumis melo HOM05D007639 ORTHO05D009509 2.2e-06 58.5 139 27.3
TWI60G0667 Tripterygium wilfordii HOM05D007639 ORTHO05D009509 2.2e-06 58.5 123 27.6
Nn1g01012 Nelumbo nucifera HOM05D007496 ORTHO05D009479 2.8e-06 58.2 168 28.6
SGA_v2.0_scaffold24G10272 Striga asiatica HOM05D007639 ORTHO05D009509 2.8e-06 58.2 138 27.5
VMungo0464G1987 Vigna mungo HOM05D007358 ORTHO05D009117 2.8e-06 58.2 205 23.9
Aqoxy6G01002 Aquilegia oxysepala HOM05D007639 ORTHO05D009509 3.7e-06 57.8 124 33.1
arahy.Tifrunner.gnm1.ann1.UN0AT6 Arachis hypogaea HOM05D007496 ORTHO05D009479 3.7e-06 57.8 141 29.8
MSTRG.1303 Avicennia marina HOM05D007639 ORTHO05D009509 3.7e-06 57.8 137 25.5
FvH4_5g31860 Fragaria vesca HOM05D007358 ORTHO05D009117 3.7e-06 57.8 145 24.8
Manes.15G058900 Manihot esculenta HOM05D007390 ORTHO05D009114 3.7e-06 57.8 124 28.2
Lj4g0018028 Lotus japonicus HOM05D007496 ORTHO05D009479 4.8e-06 57.4 142 28.9
Lalb_Chr08g0235511 Lupinus albus HOM05D007763 ORTHO05D009537 4.8e-06 57.4 53 49.1
MBI16_g10987_MAGBIO Magnolia biondii HOM05D007639 ORTHO05D009509 4.8e-06 57.4 138 30.4
Atru.chr11.1049 Acer truncatum HOM05D007496 ORTHO05D009479 6.3e-06 57.0 136 31.6
BraA04t17002Z Brassica rapa HOM05D007358 ORTHO05D009117 6.3e-06 57.0 186 25.3
AL1G31880 Arabidopsis lyrata HOM05D007639 ORTHO05D009509 8.3e-06 56.6 121 28.9
Migut.L00784 Erythranthe guttata HOM05D007496 ORTHO05D009479 8.3e-06 56.6 144 28.5
Glyma.05G004200 Glycine max HOM05D007358 ORTHO05D009117 8.3e-06 56.6 204 23.0
Oeu037939.3 Olea europaea HOM05D007358 ORTHO05D009117 8.3e-06 56.6 135 28.1
PGR142G1723 Punica granatum HOM05D007358 ORTHO05D009117 8.3e-06 56.6 145 28.3
QL02p007279 Quercus lobata HOM05D007639 ORTHO05D009509 8.3e-06 56.6 148 23.6
Sed0015079 Sechium edule HOM05D007358 ORTHO05D009117 8.3e-06 56.6 204 23.0


User provided reference genes

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