Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 4.8e-101 371.7 271 100.0
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 2.5e-33 146.7 273 42.1
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 2.1e-32 143.7 273 38.5
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.2e-30 137.9 317 37.9
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 4.4e-30 136.0 273 40.7
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 9.9e-30 134.8 273 40.3
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 1.7e-29 134.0 274 39.4
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 3.7e-29 132.9 270 38.5
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 3.7e-29 132.9 126 58.7
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 8.3e-29 131.7 149 58.4
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 8.3e-29 131.7 149 58.4
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 2.4e-28 130.2 149 57.7
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 4.1e-28 129.4 126 69.8
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 1.2e-27 127.9 122 59.8
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 1.2e-27 127.9 273 39.2
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 1.6e-27 127.5 126 58.7
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 2.7e-27 126.7 277 37.2
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 2.7e-27 126.7 274 35.4
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 3.5e-27 126.3 126 66.7
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 4.6e-27 125.9 270 37.4
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 4.6e-27 125.9 133 56.4
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 4.6e-27 125.9 274 39.8
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.0e-26 124.8 134 59.0
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 1.3e-26 124.4 281 36.3
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 1.3e-26 124.4 126 61.1
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 1.3e-26 124.4 277 35.4
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 1.7e-26 124.0 132 56.1
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 1.7e-26 124.0 126 66.7
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 1.7e-26 124.0 273 41.8
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 1.7e-26 124.0 126 67.5
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 3.0e-26 123.2 122 60.7
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 3.0e-26 123.2 132 55.3
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 3.0e-26 123.2 286 38.8
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 6.6e-26 122.1 133 54.9
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 6.6e-26 122.1 270 36.7
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 6.6e-26 122.1 153 50.3
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 6.6e-26 122.1 126 56.3
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 6.6e-26 122.1 124 62.9
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 6.6e-26 122.1 126 56.3
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 1.5e-25 120.9 133 58.6
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 1.5e-25 120.9 283 37.5
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 2.5e-25 120.2 123 59.3
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 3.3e-25 119.8 126 58.7
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 3.3e-25 119.8 265 38.5
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 4.3e-25 119.4 124 58.1
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 4.3e-25 119.4 126 55.6
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 5.6e-25 119.0 127 60.6
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 5.6e-25 119.0 125 62.4
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 7.3e-25 118.6 126 61.1
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 9.5e-25 118.2 126 61.9
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 9.5e-25 118.2 125 60.8
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 1.6e-24 117.5 125 53.6
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.6e-24 117.5 125 53.6
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 2.1e-24 117.1 133 53.4
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 2.1e-24 117.1 123 56.1
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 2.1e-24 117.1 243 37.9
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 2.1e-24 117.1 133 52.6
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 2.8e-24 116.7 126 54.8
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 3.6e-24 116.3 125 60.8
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 3.6e-24 116.3 275 34.5
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 3.6e-24 116.3 124 51.6
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 3.6e-24 116.3 132 58.3
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 6.2e-24 115.5 124 62.9
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 1.1e-23 114.8 125 60.0
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 1.1e-23 114.8 130 56.9
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.8e-23 114.0 124 53.2
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 3.1e-23 113.2 281 37.0
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 4.0e-23 112.8 125 53.6
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 6.8e-23 112.1 124 63.7
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 2.0e-22 110.5 270 32.6
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 5.8e-22 109.0 85 76.5
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 7.6e-22 108.6 137 48.9
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 7.6e-22 108.6 259 35.5
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 8.4e-21 105.1 132 53.8
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 1.1e-20 104.8 126 53.2
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 9.2e-20 101.7 122 54.1
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 1.2e-19 101.3 122 54.1
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 7.8e-19 98.6 132 56.8
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 7.8e-19 98.6 117 62.4
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.0e-18 98.2 125 52.0
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 1.0e-18 98.2 124 64.5
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 3.0e-18 96.7 127 49.6
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 1.1e-17 94.7 107 57.9
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 4.3e-17 92.8 132 47.7
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 1.6e-16 90.9 107 56.1
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 4.7e-16 89.4 212 34.4
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 3.1e-15 86.7 125 48.8
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 5.3e-15 85.9 219 31.5
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 9.0e-15 85.1 85 60.0
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 1.2e-14 84.7 247 41.3
CSS0001849 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 5.8e-14 82.4 109 52.3
CSS0044569 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 5.8e-14 82.4 109 52.3
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 7.6e-14 82.0 109 56.0
Lj2A517G40 Lonicera japonica HOM05D006010 ORTHO05D007381 9.9e-14 81.6 110 50.9
Nitab4.5_0011135g0050 Nicotiana tabacum HOM05D006010 ORTHO05D007381 9.9e-14 81.6 114 50.0
Pp3c12_7630 Physcomitrium patens HOM05D006010 ORTHO05D007381 4.2e-12 76.3 127 43.3
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 7.1e-12 75.5 111 53.2
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 1.6e-11 74.3 230 33.0
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 2.7e-11 73.6 113 52.2
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 3.0e-10 70.1 226 33.2
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 5.1e-10 69.3 130 47.7
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 1.1e-09 68.2 128 39.8
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 1.9e-09 67.4 247 36.4
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 2.5e-09 67.0 45 82.2
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 4.3e-09 66.2 75 49.3
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 4.8e-08 62.8 43 81.4
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 8.1e-08 62.0 130 42.3
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 8.1e-08 62.0 42 83.3
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 8.1e-08 62.0 42 83.3
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 8.1e-08 62.0 42 83.3
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 1.4e-07 61.2 197 33.0
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 2.4e-07 60.5 41 82.9
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 2.4e-07 60.5 41 82.9
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 4.0e-07 59.7 168 30.4
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 4.5e-06 56.2 193 30.6


User provided reference genes

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