Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02800 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 1.3e-85 319.7 157 100.0
Aqoxy2G03005 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 1.5e-38 163.3 79 96.2
TAR633G0108 Trochodendron aralioides HOM05D000246 ORTHO05D007179 8.0e-24 114.4 76 72.4
Dinv40318 Davidia involucrata HOM05D000246 ORTHO05D007179 3.4e-22 109.0 77 70.1
MBI19_g18874_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 2.8e-21 105.9 76 67.1
GSVIVG01031124001 Vitis vinifera HOM05D001472 ORTHO05D002655 8.3e-21 104.4 66 72.7
Rhsim07G0187000 Rhododendron simsii HOM05D000246 ORTHO05D007179 1.1e-20 104.0 76 65.8
Cfa006619 Carpinus fangiana HOM05D000246 ORTHO05D007179 1.4e-20 103.6 63 74.6
Atru.chr2.19 Acer truncatum HOM05D000246 ORTHO05D007179 3.1e-20 102.4 75 66.7
Manes.08G118800 Manihot esculenta HOM05D000246 ORTHO05D007179 3.1e-20 102.4 70 68.6
vmacro04965 Vaccinium macrocarpon HOM05D000246 ORTHO05D007179 4.1e-20 102.1 76 65.8
arahy.Tifrunner.gnm1.ann1.JYY4I0 Arachis hypogaea HOM05D000246 ORTHO05D007179 9.1e-20 100.9 63 71.4
arahy.Tifrunner.gnm1.ann1.K95L4M Arachis hypogaea HOM05D000246 ORTHO05D007179 9.1e-20 100.9 63 71.4
Thecc.05G311900 Theobroma cacao HOM05D000246 ORTHO05D007179 9.1e-20 100.9 72 66.7
Haze_04155 Corylus avellana HOM05D000246 ORTHO05D007179 1.6e-19 100.1 63 71.4
MD04G1201600 Malus domestica HOM05D000246 ORTHO05D007179 2.7e-19 99.4 70 64.3
Gohir.A11G267000 Gossypium hirsutum HOM05D000246 ORTHO05D007179 3.5e-19 99.0 75 62.7
Gorai.007G299200 Gossypium raimondii HOM05D000246 ORTHO05D007179 5.9e-19 98.2 75 62.7
PSO170G0679 Papaver somniferum HOM05D000246 ORTHO05D007179 5.9e-19 98.2 73 65.8
Peaxi162Scf00037g00932 Petunia axillaris HOM05D000246 ORTHO05D007179 5.9e-19 98.2 76 63.2
Oeu012115.1 Olea europaea HOM05D000246 ORTHO05D007179 7.7e-19 97.8 63 69.8
CSS0043712 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 1.0e-18 97.4 69 66.7
CSS0044658 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 1.0e-18 97.4 69 66.7
Ciclev10000234m.g Citrus clementina HOM05D000246 ORTHO05D007179 1.0e-18 97.4 79 62.0
Duzib177G0836 Durio zibethinus HOM05D000246 ORTHO05D007179 1.0e-18 97.4 81 58.0
QL03p021621 Quercus lobata HOM05D000246 ORTHO05D007179 1.0e-18 97.4 63 69.8
QL03p021635 Quercus lobata HOM05D000246 ORTHO05D007179 1.0e-18 97.4 63 69.8
TWI56G0873 Tripterygium wilfordii HOM05D000246 ORTHO05D007179 1.0e-18 97.4 70 62.9
Nn3g21421 Nelumbo nucifera HOM05D000246 ORTHO05D007179 1.3e-18 97.1 74 66.2
RcHm_v2.0_Chr3g0455521 Rosa chinensis HOM05D000246 ORTHO05D007179 1.3e-18 97.1 73 60.3
Lj5A421T62 Lonicera japonica HOM05D000246 ORTHO05D007179 1.7e-18 96.7 72 65.3
Sabra05G0031700 Salix brachista HOM05D000359 ORTHO05D007179 1.7e-18 96.7 76 59.2
Migut.B01029 Erythranthe guttata HOM05D000246 ORTHO05D007179 2.3e-18 96.3 79 60.8
FAN02G0914 Fragaria x ananassa HOM05D000246 ORTHO05D007179 2.3e-18 96.3 71 63.4
FAN05G3600 Fragaria x ananassa HOM05D000246 ORTHO05D007179 2.3e-18 96.3 71 63.4
FAN14G0626 Fragaria x ananassa HOM05D000246 ORTHO05D007179 2.9e-18 95.9 71 63.4
Psat6g150320 Pisum sativum HOM05D000246 ORTHO05D007179 2.9e-18 95.9 122 44.3
PSO210G2254 Papaver somniferum HOM05D000246 ORTHO05D007179 3.8e-18 95.5 73 65.8
Solyc01g099470.3 Solanum lycopersicum HOM05D000246 ORTHO05D007179 3.8e-18 95.5 76 60.5
ClCG02G015470 Citrullus lanatus HOM05D000246 ORTHO05D007179 5.0e-18 95.1 67 65.7
Cc00_g10440 Coffea canephora HOM05D000246 ORTHO05D007179 5.0e-18 95.1 75 62.7
Gohir.D11G277100 Gossypium hirsutum HOM05D000246 ORTHO05D007179 5.0e-18 95.1 75 60.0
Nitab4.5_0002344g0100 Nicotiana tabacum HOM05D000246 ORTHO05D007179 5.0e-18 95.1 96 52.1
Sopen01g043000 Solanum pennellii HOM05D000246 ORTHO05D007179 5.0e-18 95.1 96 52.1
arahy.Tifrunner.gnm1.ann1.G0LK44 Arachis hypogaea HOM05D000246 ORTHO05D007179 6.5e-18 94.7 68 66.2
Lj5A431G15 Lonicera japonica HOM05D000246 ORTHO05D007179 6.5e-18 94.7 72 63.9
Potri.005G026400 Populus trichocarpa HOM05D000246 ORTHO05D007179 8.6e-18 94.4 70 61.4
MELO3C004226.2 Cucumis melo HOM05D000246 ORTHO05D007179 1.1e-17 94.0 67 67.2
Lsat_1_v5_gn_9_123801 Lactuca sativa HOM05D000246 ORTHO05D007179 1.1e-17 94.0 81 61.7
Nitab4.5_0008329g0030 Nicotiana tabacum HOM05D000246 ORTHO05D007179 1.1e-17 94.0 96 51.0
Prupe.6G321800 Prunus persica HOM05D000246 ORTHO05D007179 1.1e-17 94.0 70 60.0
Hund21703 Selenicereus undatus HOM05D000246 ORTHO05D007179 1.1e-17 94.0 80 58.8
TPR.G6096 Trifolium pratense HOM05D000246 ORTHO05D007179 1.5e-17 93.6 77 58.4
CAN.G1652.4 Capsicum annuum HOM05D000246 ORTHO05D007179 1.9e-17 93.2 77 58.4
Ca_10124_v3 Cicer arietinum L. HOM05D000246 ORTHO05D007179 1.9e-17 93.2 81 56.8
ECA240G0991 Erigeron canadensis HOM05D000246 ORTHO05D007179 1.9e-17 93.2 82 53.7
CiPaw.08G162700 Carya illinoinensis HOM05D000246 ORTHO05D007179 2.5e-17 92.8 72 58.3
AUR62000778 Chenopodium quinoa HOM05D000246 ORTHO05D007179 2.5e-17 92.8 84 58.3
FvH4_6g06440 Fragaria vesca HOM05D000246 ORTHO05D007179 2.5e-17 92.8 71 62.0
CDE01G0473 Ceratophyllum demersum HOM05D000246 ORTHO05D007179 3.3e-17 92.4 76 59.2
Eucgr.L01168 Eucalyptus grandis HOM05D000246 ORTHO05D007179 5.5e-17 91.7 77 55.8
Lalb_Chr21g0310621 Lupinus albus HOM05D000246 ORTHO05D007179 5.5e-17 91.7 83 55.4
PGR031G3950 Punica granatum HOM05D000246 ORTHO05D007179 5.5e-17 91.7 75 53.3
CANSAT54G2417 Cannabis sativa HOM05D000246 ORTHO05D007179 7.2e-17 91.3 77 55.8
AUR62005191 Chenopodium quinoa HOM05D000246 ORTHO05D007179 7.2e-17 91.3 84 57.1
Medtr1g083250 Medicago truncatula HOM05D000246 ORTHO05D007179 7.2e-17 91.3 101 48.5
CsaV3_2G006600 Cucumis sativus L. HOM05D000246 ORTHO05D007179 9.5e-17 90.9 67 64.2
Glyma.20G236000 Glycine max HOM05D000246 ORTHO05D007179 1.2e-16 90.5 70 58.6
HanXRQChr03g0072511 Helianthus annuus HOM05D000246 ORTHO05D007179 1.2e-16 90.5 65 66.2
SHI18110 Sapria himalayana HOM05D000246 ORTHO05D007179 2.1e-16 89.7 70 61.4
Sed0014533 Sechium edule HOM05D000246 ORTHO05D007179 4.7e-16 88.6 78 60.3
Actinidia05681 Actinidia chinensis HOM05D000246 ORTHO05D007179 8.0e-16 87.8 57 64.9
Phvul.007G196600 Phaseolus vulgaris HOM05D000246 ORTHO05D007179 8.0e-16 87.8 103 48.5
Cpa.g.sc48.83 Carica papaya HOM05D000246 ORTHO05D007179 1.0e-15 87.4 75 60.0
HPP92_010691 Vanilla planifolia HOM05D000246 ORTHO05D007179 2.3e-15 86.3 82 57.3
COL.COLO4_10505 Corchorus olitorius HOM05D000246 ORTHO05D007179 3.0e-15 85.9 70 58.6
AT5G27680 Arabidopsis thaliana HOM05D000246 ORTHO05D007179 4.0e-15 85.5 82 50.0
AL6G39350 Arabidopsis lyrata HOM05D000246 ORTHO05D007179 5.2e-15 85.1 82 50.0
Thhalv10003644m.g Eutrema salsugineum HOM05D000246 ORTHO05D007179 1.2e-14 84.0 94 45.7
FvH4_6g06441 Fragaria vesca HOM05D000246 ORTHO05D007179 1.2e-14 84.0 79 53.2
EL10Ac4g09931 Beta vulgaris HOM05D000246 ORTHO05D007179 1.5e-14 83.6 82 57.3
A06p37370 Brassica napus HOM05D000246 ORTHO05D007179 1.5e-14 83.6 94 46.8
Sp2g20840 Schrenkiella parvula HOM05D000246 ORTHO05D007179 1.5e-14 83.6 71 59.2
FAN05G4756 Fragaria x ananassa HOM05D000246 ORTHO05D007179 2.6e-14 82.8 74 56.8
C07p41090 Brassica napus HOM05D000246 ORTHO05D007179 3.4e-14 82.4 94 45.7
BolC7t44636H Brassica oleracea HOM05D000246 ORTHO05D007179 3.4e-14 82.4 94 45.7
BraA06t26661Z Brassica rapa HOM05D000246 ORTHO05D007179 3.4e-14 82.4 94 45.7
Carub.0006s2490 Capsella rubella HOM05D000246 ORTHO05D007179 3.4e-14 82.4 82 47.6
Lj5g0018456 Lotus japonicus HOM05D000246 ORTHO05D007179 4.4e-14 82.0 120 39.2
CARHR186200 Cardamine hirsuta HOM05D000246 ORTHO05D007179 7.5e-14 81.3 82 48.8
Aa31LG11G9420 Aethionema arabicum HOM05D000246 ORTHO05D007179 9.8e-14 80.9 74 52.7
Zm00001eb354210 Zea mays HOM05D000246 ORTHO05D007179 9.8e-14 80.9 74 52.7
ATR0210G017 Amborella trichopoda HOM05D000246 ORTHO05D007179 1.1e-12 77.4 69 52.2
VMungo0720G1388 Vigna mungo HOM05D000246 ORTHO05D007179 1.4e-12 77.0 104 45.2
DCAR_003348 Daucus carota HOM05D000246 ORTHO05D007179 2.0e-11 73.2 55 63.6
SEGI_40367 Sequoiadendron giganteum HOM05D000246 ORTHO05D007179 3.8e-10 68.9 88 42.0
Solyc02g088430.1 Solanum lycopersicum HOM05D000246 ORTHO05D007179 9.5e-09 64.3 89 42.7
MBI19_g41249_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 2.8e-08 62.8 45 64.4
BcaNung04538 Brassica carinata HOM05D005214 ORTHO05D005861 8.9e-07 57.8 46 58.7
C07p40980 Brassica napus HOM05D008896 ORTHO05D011108 4.4e-06 55.5 43 60.5


User provided reference genes

Program Settings