Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01968 Aquilegia oxysepala HOM05D001966 ORTHO05D007227 4.4e-55 217.6 103 100.0
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 8.9e-32 140.2 68 95.6
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 3.4e-31 138.3 68 94.1
Potri.011G074201 Populus trichocarpa HOM05D001966 ORTHO05D007227 1.7e-30 136.0 69 94.2
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 2.9e-30 135.2 68 91.2
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 2.9e-30 135.2 68 91.2
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 2.9e-30 135.2 68 91.2
Lsat_1_v5_gn_4_147860 Lactuca sativa HOM05D001966 ORTHO05D007227 2.9e-30 135.2 68 91.2
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 2.9e-30 135.2 68 91.2
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 2.9e-30 135.2 68 91.2
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 6.4e-30 134.0 68 91.2
Sed0014217 Sechium edule HOM05D001966 ORTHO05D007227 6.4e-30 134.0 68 91.2
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 2.4e-29 132.1 68 89.7
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 1.6e-28 129.4 68 88.2
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 3.5e-28 128.3 70 87.1
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 3.5e-28 128.3 70 87.1
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 1.3e-27 126.3 70 87.1
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 1.3e-27 126.3 68 86.8
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 1.3e-27 126.3 68 86.8
HPP92_028385 Vanilla planifolia HOM05D001966 ORTHO05D007227 6.6e-27 124.0 61 91.8
HPP92_028396 Vanilla planifolia HOM05D001966 ORTHO05D007227 6.6e-27 124.0 61 91.8
HPP92_028404 Vanilla planifolia HOM05D001966 ORTHO05D007227 6.6e-27 124.0 61 91.8
HPP92_028413 Vanilla planifolia HOM05D001966 ORTHO05D007227 6.6e-27 124.0 61 91.8
HPP92_028421 Vanilla planifolia HOM05D001966 ORTHO05D007227 6.6e-27 124.0 61 91.8
HPP92_028428 Vanilla planifolia HOM05D001966 ORTHO05D007227 6.6e-27 124.0 61 91.8
HPP92_028434 Vanilla planifolia HOM05D001966 ORTHO05D007227 6.6e-27 124.0 61 91.8
arahy.Tifrunner.gnm1.ann1.ZHN7AL Arachis hypogaea HOM05D001966 ORTHO05D007227 1.1e-26 123.2 102 63.7
Hma1.2p1_0544F.1_g175783 Hydrangea macrophylla HOM05D001966 ORTHO05D007227 1.9e-26 122.5 61 91.8
arahy.Tifrunner.gnm1.ann1.KZKE62 Arachis hypogaea HOM05D001966 ORTHO05D007227 3.3e-26 121.7 66 86.4
Cfa023004 Carpinus fangiana HOM05D001966 ORTHO05D007227 3.3e-26 121.7 61 91.8
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 4.3e-26 121.3 66 84.8
Sed0012652 Sechium edule HOM05D001966 ORTHO05D007227 7.3e-26 120.6 61 90.2
VMungo1127G1224 Vigna mungo HOM05D001966 ORTHO05D007227 9.5e-26 120.2 66 83.3
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-25 119.8 66 84.8
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-25 119.8 75 76.0
BolSC29t60539H Brassica oleracea HOM05D001966 ORTHO05D007227 4.7e-25 117.9 61 88.5
BolSC29t60556H Brassica oleracea HOM05D001966 ORTHO05D007227 4.7e-25 117.9 61 88.5
BolSC35t60713H Brassica oleracea HOM05D001966 ORTHO05D007227 4.7e-25 117.9 61 88.5
BolSC44t60814H Brassica oleracea HOM05D001966 ORTHO05D007227 4.7e-25 117.9 61 88.5
BolSC45t60900H Brassica oleracea HOM05D001966 ORTHO05D007227 4.7e-25 117.9 61 88.5
BolSC45t60918H Brassica oleracea HOM05D001966 ORTHO05D007227 4.7e-25 117.9 61 88.5
BolSC46t60967H Brassica oleracea HOM05D001966 ORTHO05D007227 4.7e-25 117.9 61 88.5
BolSC49t61133H Brassica oleracea HOM05D001966 ORTHO05D007227 4.7e-25 117.9 61 88.5
BraSC103t45419Z Brassica rapa HOM05D001966 ORTHO05D007227 4.7e-25 117.9 61 88.5
BraSC25t45921Z Brassica rapa HOM05D001966 ORTHO05D007227 4.7e-25 117.9 61 88.5
BraSC59t46509Z Brassica rapa HOM05D001966 ORTHO05D007227 4.7e-25 117.9 61 88.5
BraSC59t46540Z Brassica rapa HOM05D001966 ORTHO05D007227 4.7e-25 117.9 61 88.5
Medtr0002s0250 Medicago truncatula HOM05D001966 ORTHO05D007227 8.1e-25 117.1 66 84.8
VMungo0464G1535 Vigna mungo HOM05D001966 ORTHO05D007227 1.8e-24 115.9 66 81.8
arahy.Tifrunner.gnm1.ann1.6ZZ12G Arachis hypogaea HOM05D001966 ORTHO05D007227 6.8e-24 114.0 61 86.9
arahy.Tifrunner.gnm1.ann1.77ZW6W Arachis hypogaea HOM05D001966 ORTHO05D007227 6.8e-24 114.0 61 86.9
arahy.Tifrunner.gnm1.ann1.EGZ6K4 Arachis hypogaea HOM05D001966 ORTHO05D007227 6.8e-24 114.0 61 86.9
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 4.4e-23 111.3 62 85.5
HanXRQChr05g0134861 Helianthus annuus HOM05D001966 ORTHO05D007227 5.8e-23 110.9 58 86.2
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 7.6e-23 110.5 68 83.8
Medtr3g035620 Medicago truncatula HOM05D001966 ORTHO05D007227 9.9e-23 110.2 61 85.2
ClCG11G009300 Citrullus lanatus HOM05D001966 ORTHO05D007227 1.3e-22 109.8 55 89.1
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 2.9e-22 108.6 75 73.3
Phvul.003G067400 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 2.9e-22 108.6 61 80.3
Glyma.08G276350 Glycine max HOM05D001966 ORTHO05D007227 1.4e-21 106.3 61 78.7
arahy.Tifrunner.gnm1.ann1.3I0RGA Arachis hypogaea HOM05D001966 ORTHO05D007227 1.9e-21 105.9 61 80.3
FvH4_c3g00070 Fragaria vesca HOM05D001966 ORTHO05D007227 3.2e-21 105.1 63 85.7
Glyma.05G084525 Glycine max HOM05D001966 ORTHO05D007227 3.2e-21 105.1 66 75.8
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 3.2e-21 105.1 59 84.7
DCAR_001522 Daucus carota HOM05D001966 ORTHO05D007227 5.4e-21 104.4 61 80.3
Sed0001460 Sechium edule HOM05D001966 ORTHO05D007227 5.4e-21 104.4 52 88.5
arahy.Tifrunner.gnm1.ann1.F2PHFK Arachis hypogaea HOM05D000890 ORTHO05D000697 1.6e-20 102.8 55 85.5
arahy.Tifrunner.gnm1.ann1.I9YN8I Arachis hypogaea HOM05D001966 ORTHO05D007227 2.1e-20 102.4 60 76.7
EL10Ac8g19705 Beta vulgaris HOM05D001966 ORTHO05D007227 6.0e-20 100.9 63 79.4
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.8e-20 100.5 70 68.6
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 1.3e-19 99.8 50 90.0
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.3e-19 99.8 50 90.0
BolSC29t60498H Brassica oleracea HOM05D001966 ORTHO05D007227 3.0e-19 98.6 50 88.0
BolSC35t60683H Brassica oleracea HOM05D001966 ORTHO05D007227 3.0e-19 98.6 50 88.0
BolSC44t60831H Brassica oleracea HOM05D001966 ORTHO05D007227 3.0e-19 98.6 50 88.0
Lsat_1_v5_gn_3_13340 Lactuca sativa HOM05D001966 ORTHO05D007227 3.9e-19 98.2 54 81.5
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.9e-18 95.9 50 86.0
Glyma.09G133875 Glycine max HOM05D001966 ORTHO05D007227 4.3e-18 94.7 62 77.4
SHI36539 Sapria himalayana HOM05D001966 ORTHO05D007227 4.8e-17 91.3 68 69.1
Gohir.1Z049882 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.0e-15 85.9 43 90.7
Gohir.A04G039270 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.0e-15 85.9 43 90.7
Gohir.A05G323724 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.0e-15 85.9 43 90.7
SHI36394 Sapria himalayana HOM05D001966 ORTHO05D007227 2.6e-15 85.5 44 84.1
Gorai.006G045900 Gossypium raimondii HOM05D001966 ORTHO05D007227 1.7e-14 82.8 52 75.0
arahy.Tifrunner.gnm1.ann1.Q8ISGW Arachis hypogaea HOM05D001966 ORTHO05D007227 2.2e-14 82.4 52 73.1
Gohir.D02G016950 Gossypium hirsutum HOM05D001966 ORTHO05D007227 5.4e-13 77.8 59 64.4
FAN13G0121 Fragaria x ananassa HOM05D001966 ORTHO05D007227 9.3e-13 77.0 63 69.8
Gorai.005G020800 Gossypium raimondii HOM05D001966 ORTHO05D007227 3.9e-11 71.6 59 61.0
Sed0008904 Sechium edule HOM05D001966 ORTHO05D007227 1.5e-10 69.7 49 63.3
arahy.Tifrunner.gnm1.ann1.N1DH3R Arachis hypogaea HOM05D001966 ORTHO05D007227 3.3e-10 68.6 58 62.1
Hma1.2p1_0544F.1_g175786 Hydrangea macrophylla HOM05D001966 ORTHO05D007227 2.8e-09 65.5 31 90.3
arahy.Tifrunner.gnm1.ann1.FN7561 Arachis hypogaea HOM05D001966 ORTHO05D007227 4.8e-09 64.7 41 70.7
Gohir.A09G039165 Gossypium hirsutum HOM05D001966 ORTHO05D007227 6.2e-09 64.3 50 64.0
Gohir.D09G040060 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.4e-08 62.4 44 70.5
Gohir.D02G151976 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.5e-07 59.7 43 67.4
MELO3C027875.2 Cucumis melo HOM05D001966 ORTHO05D007227 5.8e-07 57.8 33 78.8
Atru.chr9.267 Acer truncatum HOM05D001966 ORTHO05D007227 1.3e-06 56.6 36 72.2
CAN.G1648.17 Capsicum annuum HOM05D001966 ORTHO05D007227 1.7e-06 56.2 49 57.1
CAN.G593.3 Capsicum annuum HOM05D001966 ORTHO05D004271 4.9e-06 54.7 29 86.2
LjContig00489g0013211 Lotus japonicus HOM05D001966 ORTHO05D007227 6.4e-06 54.3 31 67.7
CAN.G386.21 Capsicum annuum HOM05D001966 ORTHO05D010055 8.4e-06 53.9 30 80.0
MELO3C000925.2 Cucumis melo HOM05D001966 ORTHO05D007227 8.4e-06 53.9 33 75.8


User provided reference genes

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