Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00525 Aquilegia oxysepala HOM05D007392 ORTHO05D009181 3.7e-70 268.1 133 100.0
TAR623G1707 Trochodendron aralioides HOM05D007392 ORTHO05D009181 8.0e-41 170.6 135 67.4
PSO384G3152 Papaver somniferum HOM05D007392 ORTHO05D009181 3.1e-37 158.7 139 62.6
PSO339G3225 Papaver somniferum HOM05D007392 ORTHO05D009181 4.5e-36 154.8 140 62.1
GSVIVG01025476001 Vitis vinifera HOM05D007392 ORTHO05D009181 1.0e-35 153.7 133 58.6
Dinv13477 Davidia involucrata HOM05D007392 ORTHO05D009181 1.2e-31 140.2 136 58.1
Nn2g15869 Nelumbo nucifera HOM05D007392 ORTHO05D009181 1.2e-31 140.2 135 56.3
Cfa009557 Carpinus fangiana HOM05D007392 ORTHO05D009181 4.4e-31 138.3 134 56.7
CiPaw.13G177600 Carya illinoinensis HOM05D007392 ORTHO05D009181 4.5e-28 128.3 133 55.6
Potri.001G003300 Populus trichocarpa HOM05D007392 ORTHO05D009181 1.5e-26 123.2 138 55.8
Potri.003G221800 Populus trichocarpa HOM05D007392 ORTHO05D009181 2.5e-26 122.5 138 54.3
TWI34G1824 Tripterygium wilfordii HOM05D007392 ORTHO05D009181 1.2e-25 120.2 142 49.3
MD03G1003200 Malus domestica HOM05D007392 ORTHO05D009181 1.6e-25 119.8 147 47.6
FvH4_3g45780 Fragaria vesca HOM05D007392 ORTHO05D009181 2.1e-25 119.4 140 50.0
Manes.15G109800 Manihot esculenta HOM05D007392 ORTHO05D009181 2.7e-25 119.0 145 51.0
RcHm_v2.0_Chr5g0083851 Rosa chinensis HOM05D007392 ORTHO05D009181 6.1e-25 117.9 140 49.3
QL01p003594 Quercus lobata HOM05D007392 ORTHO05D009181 8.0e-25 117.5 161 44.7
Nn7g35849 Nelumbo nucifera HOM05D007392 ORTHO05D009181 1.8e-24 116.3 113 56.6
Rhsim13G0233100 Rhododendron simsii HOM05D007392 ORTHO05D009181 3.0e-24 115.5 133 53.4
FAN11G3804 Fragaria x ananassa HOM05D007392 ORTHO05D009181 1.2e-23 113.6 139 48.9
FAN16G0802 Fragaria x ananassa HOM05D007392 ORTHO05D009181 1.2e-23 113.6 141 48.2
Ciclev10017000m.g Citrus clementina HOM05D007392 ORTHO05D009181 4.4e-23 111.7 151 45.7
CANSAT11G0973 Cannabis sativa HOM05D007392 ORTHO05D009181 7.5e-23 110.9 136 50.7
Actinidia16241 Actinidia chinensis HOM05D007392 ORTHO05D009181 1.3e-22 110.2 128 53.1
Prupe.6G002800 Prunus persica HOM05D007392 ORTHO05D009181 1.3e-22 110.2 119 52.1
Cc01_g00150 Coffea canephora HOM05D007392 ORTHO05D009181 2.8e-22 109.0 139 51.1
Lsat_1_v5_gn_6_55560 Lactuca sativa HOM05D007392 ORTHO05D009181 4.8e-22 108.2 138 48.6
ECA233G2404 Erigeron canadensis HOM05D007392 ORTHO05D009181 1.1e-21 107.1 143 47.6
Eucgr.J01763 Eucalyptus grandis HOM05D007392 ORTHO05D009181 3.1e-21 105.5 132 47.0
Actinidia00905 Actinidia chinensis HOM05D007392 ORTHO05D009181 1.2e-20 103.6 135 51.1
Sabra03G0165000 Salix brachista HOM05D007392 ORTHO05D009181 5.9e-20 101.3 117 51.3
CsaV3_1G041630 Cucumis sativus L. HOM05D007392 ORTHO05D009181 1.0e-19 100.5 139 47.5
MELO3C015574.2 Cucumis melo HOM05D007392 ORTHO05D009181 3.8e-19 98.6 139 46.8
ClCG03G014560 Citrullus lanatus HOM05D007392 ORTHO05D009181 6.6e-19 97.8 131 47.3
FAN25G2102 Fragaria x ananassa HOM05D007392 ORTHO05D009181 6.6e-19 97.8 123 49.6
BcaC05g29176 Brassica carinata HOM05D007392 ORTHO05D009181 2.5e-18 95.9 164 40.2
Nitab4.5_0006195g0060 Nicotiana tabacum HOM05D007392 ORTHO05D009181 4.2e-18 95.1 114 51.8
A05p36050 Brassica napus HOM05D007392 ORTHO05D009181 5.5e-18 94.7 162 41.4
Nitab4.5_0000551g0100 Nicotiana tabacum HOM05D007392 ORTHO05D009181 7.2e-18 94.4 112 51.8
PGSC0003DMG402032165 Solanum tuberosum HOM05D007392 ORTHO05D009181 7.2e-18 94.4 133 45.9
Thhalv10021633m.g Eutrema salsugineum HOM05D007392 ORTHO05D009181 9.5e-18 94.0 165 41.2
Oeu004754.1 Olea europaea HOM05D007392 ORTHO05D009181 1.2e-17 93.6 115 48.7
Carub.0003s1294 Capsella rubella HOM05D007392 ORTHO05D009181 2.1e-17 92.8 160 42.5
Sopen01g001550 Solanum pennellii HOM05D007392 ORTHO05D009181 2.8e-17 92.4 133 48.1
PGR119G0135 Punica granatum HOM05D007392 ORTHO05D009181 4.7e-17 91.7 130 46.2
THA.LOC104810320 Tarenaya hassleriana HOM05D007392 ORTHO05D009181 4.7e-17 91.7 149 45.0
vmacro04261 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 8.0e-17 90.9 101 55.4
Solyc01g005530.3 Solanum lycopersicum HOM05D007392 ORTHO05D009181 1.0e-16 90.5 133 47.4
AT3G13480 Arabidopsis thaliana HOM05D007392 ORTHO05D009181 1.4e-16 90.1 161 41.6
Peaxi162Scf00705g00062 Petunia axillaris HOM05D007392 ORTHO05D009181 1.4e-16 90.1 128 46.1
C01p51590 Brassica napus HOM05D007392 ORTHO05D009181 3.0e-16 89.0 155 39.4
CAN.G1834.12 Capsicum annuum HOM05D007392 ORTHO05D009181 3.0e-16 89.0 133 41.4
Sed0020032 Sechium edule HOM05D007392 ORTHO05D009181 4.0e-16 88.6 135 41.5
A01p40100 Brassica napus HOM05D007392 ORTHO05D009181 6.8e-16 87.8 157 41.4
BraA01t04052Z Brassica rapa HOM05D007392 ORTHO05D009181 6.8e-16 87.8 157 41.4
CARHR088140 Cardamine hirsuta HOM05D007392 ORTHO05D009181 6.8e-16 87.8 156 38.5
BolC1t05102H Brassica oleracea HOM05D007392 ORTHO05D009181 8.9e-16 87.4 155 39.4
Oeu059652.1 Olea europaea HOM05D007392 ORTHO05D009181 8.9e-16 87.4 112 49.1
Sp3g11690 Schrenkiella parvula HOM05D007392 ORTHO05D009181 8.9e-16 87.4 166 37.3
HPP92_026624 Vanilla planifolia HOM05D007392 ORTHO05D009181 8.9e-16 87.4 134 44.0
HPP92_024836 Vanilla planifolia HOM05D007392 ORTHO05D009181 2.0e-15 86.3 134 44.0
SalBow3G3897 Salvia bowleyana HOM05D007392 ORTHO05D009181 2.6e-15 85.9 138 43.5
Sc09g0000040 Simmondsia chinensis HOM05D007392 ORTHO05D009181 2.6e-15 85.9 160 40.6
MD11G1003000 Malus domestica HOM05D007392 ORTHO05D009181 3.4e-15 85.5 146 41.1
SGA_v2.0_scaffold6G03356 Striga asiatica HOM05D007392 ORTHO05D009181 5.7e-15 84.7 142 43.0
DCAR_032194 Daucus carota HOM05D007392 ORTHO05D009181 9.8e-15 84.0 123 42.3
Sabra01G0002400 Salix brachista HOM05D007392 ORTHO05D009181 3.7e-14 82.0 144 43.1
Migut.D02593 Erythranthe guttata HOM05D007392 ORTHO05D009181 8.3e-14 80.9 131 42.0
MSTRG.20935 Avicennia marina HOM05D000287 ORTHO05D000319 1.8e-13 79.7 114 45.6
BcaB04g18766 Brassica carinata HOM05D007392 ORTHO05D009181 2.4e-13 79.3 152 40.8
EL10Ac4g10390 Beta vulgaris HOM05D007392 ORTHO05D009181 5.4e-13 78.2 131 40.5
vmacro23199 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 5.4e-13 78.2 92 54.3
AL3G25390 Arabidopsis lyrata HOM05D007392 ORTHO05D009181 1.6e-12 76.6 159 36.5
BraA03t12977Z Brassica rapa HOM05D007392 ORTHO05D009181 1.6e-12 76.6 168 36.9
Aa31LG8G680 Aethionema arabicum HOM05D007392 ORTHO05D009181 3.5e-12 75.5 137 38.0
Migut.D02571 Erythranthe guttata HOM05D007392 ORTHO05D009181 5.9e-12 74.7 134 41.8
C05p54400 Brassica napus HOM05D007392 ORTHO05D009181 1.0e-11 73.9 143 37.1
Cpa.g.sc119.37 Carica papaya HOM05D007392 ORTHO05D009181 5.6e-10 68.2 97 46.4
C03p46430 Brassica napus HOM05D007392 ORTHO05D009181 3.1e-08 62.4 128 38.3
PSO170G0396 Papaver somniferum HOM05D003947 ORTHO05D004614 3.1e-08 62.4 128 32.0
HPP92_015638 Vanilla planifolia HOM05D007392 ORTHO05D009181 4.0e-08 62.0 132 38.6
CDE07G1735 Ceratophyllum demersum HOM05D007392 ORTHO05D009181 5.2e-08 61.6 80 43.8
PSO700G0284 Papaver somniferum HOM05D003947 ORTHO05D004614 5.2e-08 61.6 124 34.7
Sed0008617 Sechium edule HOM05D003947 ORTHO05D004614 5.2e-08 61.6 151 39.1
MD05G1032900 Malus domestica HOM05D003947 ORTHO05D004614 6.8e-08 61.2 140 35.7
BcaC01g03991 Brassica carinata HOM05D007392 ORTHO05D009181 8.9e-08 60.8 141 34.8
SGA_v2.0_scaffold6G03313 Striga asiatica HOM05D007392 ORTHO05D009181 1.5e-07 60.1 137 36.5
Lalb_Chr21g0305571 Lupinus albus HOM05D003947 ORTHO05D004614 2.0e-07 59.7 141 36.9
Zm00001eb060590 Zea mays HOM05D029728 ORTHO05D009181 2.0e-07 59.7 85 41.2
Zm00001eb213050 Zea mays HOM05D029728 ORTHO05D009181 2.0e-07 59.7 144 34.0
FAN27G1126 Fragaria x ananassa HOM05D003947 ORTHO05D004614 2.6e-07 59.3 150 33.3
Lj5g0019118 Lotus japonicus HOM05D003947 ORTHO05D004614 2.6e-07 59.3 144 36.8
TWI60G0849 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 2.6e-07 59.3 141 35.5
Manes.18G094500 Manihot esculenta HOM05D003947 ORTHO05D004614 3.4e-07 58.9 140 35.0
CiPaw.16G008700 Carya illinoinensis HOM05D003947 ORTHO05D004614 4.4e-07 58.5 142 35.9
Eucgr.F04191 Eucalyptus grandis HOM05D003947 ORTHO05D004614 4.4e-07 58.5 146 38.4
PGSC0003DMG401025066 Solanum tuberosum HOM05D003947 ORTHO05D004614 4.4e-07 58.5 146 35.6
Nitab4.5_0000099g0180 Nicotiana tabacum HOM05D003947 ORTHO05D004614 5.8e-07 58.2 152 35.5
Os03g0795100 Oryza sativa ssp. japonica HOM05D029728 ORTHO05D009181 7.5e-07 57.8 60 51.7
Actinidia17770 Actinidia chinensis HOM05D003947 ORTHO05D004614 9.8e-07 57.4 142 34.5
Sopen04g027950 Solanum pennellii HOM05D003947 ORTHO05D004614 9.8e-07 57.4 146 34.9
Nitab4.5_0002812g0010 Nicotiana tabacum HOM05D003947 ORTHO05D004614 1.3e-06 57.0 152 34.2
Solyc04g071970.4 Solanum lycopersicum HOM05D003947 ORTHO05D004614 1.3e-06 57.0 146 34.9
Dinv41043 Davidia involucrata HOM05D003947 ORTHO05D004614 1.7e-06 56.6 148 36.5
Potri.002G064900 Populus trichocarpa HOM05D003947 ORTHO05D004614 1.7e-06 56.6 146 38.4
TWI32G0514 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 1.7e-06 56.6 140 32.9
TAR381G0583 Trochodendron aralioides HOM05D000488 ORTHO05D000347 1.7e-06 56.6 63 55.6
GSVIVG01034579001 Vitis vinifera HOM05D003947 ORTHO05D004614 1.7e-06 56.6 141 36.9
CANSAT25G3237 Cannabis sativa HOM05D003947 ORTHO05D004614 2.2e-06 56.2 145 33.8
VMungo0720G0983 Vigna mungo HOM05D003947 ORTHO05D004614 2.2e-06 56.2 149 36.9
C03p46400 Brassica napus HOM05D007392 ORTHO05D009181 2.9e-06 55.8 141 35.5
FvH4_2g13060 Fragaria vesca HOM05D003947 ORTHO05D004614 2.9e-06 55.8 150 33.3
Potri.005G196300 Populus trichocarpa HOM05D003947 ORTHO05D004614 2.9e-06 55.8 149 34.9
Prupe.8G040000 Prunus persica HOM05D003947 ORTHO05D004614 2.9e-06 55.8 148 35.1
ATR1120G111 Amborella trichopoda HOM05D003947 ORTHO05D004614 3.7e-06 55.5 152 34.9
CiPaw.15G012800 Carya illinoinensis HOM05D003947 ORTHO05D004614 3.7e-06 55.5 142 35.9
Cc10_g15190 Coffea canephora HOM05D003947 ORTHO05D004614 3.7e-06 55.5 146 34.9
Duzib116G0212 Durio zibethinus HOM05D003947 ORTHO05D004614 3.7e-06 55.5 142 34.5
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 3.7e-06 55.5 148 33.1
Cfa018286 Carpinus fangiana HOM05D003947 ORTHO05D004614 4.9e-06 55.1 141 34.8
Ca_10666_v3 Cicer arietinum L. HOM05D003947 ORTHO05D004614 4.9e-06 55.1 141 33.3
Glyma.10G221900 Glycine max HOM05D003947 ORTHO05D004614 4.9e-06 55.1 141 36.2
Lalb_Chr02g0141531 Lupinus albus HOM05D003947 ORTHO05D004614 4.9e-06 55.1 148 35.1
Phvul.007G083100 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 4.9e-06 55.1 149 34.9
Hma1.2p1_0678F.1_g202000 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 6.4e-06 54.7 148 35.8
Psat6g190840 Pisum sativum HOM05D003947 ORTHO05D004614 6.4e-06 54.7 149 35.6
RcHm_v2.0_Chr6g0274321 Rosa chinensis HOM05D003947 ORTHO05D004614 6.4e-06 54.7 145 33.8
Sabra05G0149600 Salix brachista HOM05D003947 ORTHO05D004614 6.4e-06 54.7 146 34.2
Atru.chr13.2012 Acer truncatum HOM05D003947 ORTHO05D004614 8.3e-06 54.3 150 32.7
Glyma.20G169600 Glycine max HOM05D003947 ORTHO05D004614 8.3e-06 54.3 142 35.2


User provided reference genes

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