Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.16g106900 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.1e-61 238.8 120 100.0
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 3.2e-57 224.9 120 94.2
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.4e-44 182.2 120 73.3
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-40 167.9 120 66.7
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-39 166.0 120 65.8
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 3.9e-39 164.9 120 65.8
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-38 162.2 120 63.3
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-38 162.2 120 63.3
SHI04169 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-38 161.8 120 65.0
Oeu032225.1 Olea europaea HOM05D000002 ORTHO05D004433 4.4e-38 161.4 119 68.1
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-38 161.4 120 63.3
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 7.4e-38 160.6 120 64.2
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 9.7e-38 160.2 120 64.2
SHI37106 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-37 159.5 120 63.3
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-37 158.3 120 62.5
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-37 158.3 118 64.4
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-37 158.3 118 64.4
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-37 158.3 120 62.5
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-37 157.9 120 61.7
SHI09917 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-37 157.1 120 63.3
SHI32312 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-37 157.1 120 62.5
CSS0018245 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-36 156.0 120 61.7
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-36 156.0 115 65.2
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-36 155.6 117 63.2
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 5.3e-36 154.5 120 63.3
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 9.1e-36 153.7 119 62.2
SHI05550 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-35 152.9 120 60.0
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-34 150.2 120 58.3
PGSC0003DMG400011408 Solanum tuberosum HOM05D000002 ORTHO05D000001 1.1e-33 146.7 103 68.0
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-33 145.2 120 57.5
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.7e-30 134.4 118 60.2
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 2.8e-29 132.1 102 60.8
CSS0010112 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-28 129.4 120 54.2
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-27 126.7 100 59.0
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-26 123.2 118 48.3
CsaV3_6G036770 Cucumis sativus L. HOM05D000097 ORTHO05D000041 2.9e-26 122.1 112 52.7
Hma1.2p1_0446F.1_g154740 Hydrangea macrophylla HOM05D000002 ORTHO05D004433 8.5e-26 120.6 108 57.4
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-25 118.6 106 53.8
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.4e-25 117.1 118 49.2
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-24 115.9 118 47.5
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-24 115.5 118 48.3
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.0e-24 114.0 118 48.3
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-23 113.6 118 46.6
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-23 113.6 118 46.6
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-23 113.6 118 46.6
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-23 112.5 117 51.3
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 5.2e-23 111.3 120 45.0
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.7e-23 110.9 119 47.9
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-22 109.0 88 58.0
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 9.7e-22 107.1 89 56.2
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 9.7e-22 107.1 89 56.2
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 2.8e-21 105.5 84 59.5
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.3e-21 104.4 120 40.8
ECA233G2319 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-20 103.6 118 45.8
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-20 103.2 112 42.9
Oeu011711.1 Olea europaea HOM05D000002 ORTHO05D004433 2.0e-19 99.4 85 60.0
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 2.0e-19 99.4 82 57.3
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-18 96.3 119 41.2
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-18 96.3 82 52.4
CAN.G1829.1 Capsicum annuum HOM05D000583 ORTHO05D004433 8.5e-18 94.0 120 43.3
ECA240G1708 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-17 93.2 110 42.7
PGSC0003DMG400046635 Solanum tuberosum HOM05D000002 ORTHO05D004433 2.5e-17 92.4 103 47.6
Nn1g03238 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.2e-17 92.0 121 41.3
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.2e-17 92.0 115 46.1
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-16 89.7 107 41.1
C06p27510 Brassica napus HOM05D000140 ORTHO05D000087 6.1e-16 87.8 112 43.8
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.1e-16 87.8 100 46.0
SHI12755 Sapria himalayana HOM05D000002 ORTHO05D004433 1.0e-15 87.0 76 53.9
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.3e-15 85.9 42 100.0
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-15 85.9 70 54.3
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 3.0e-15 85.5 119 35.3
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-15 85.5 95 46.3
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.2e-14 83.6 117 41.9
Nn2g15606 Nelumbo nucifera HOM05D000006 ORTHO05D004433 2.0e-14 82.8 95 46.3
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 3.4e-14 82.0 121 36.4
Nn2g15808 Nelumbo nucifera HOM05D000006 ORTHO05D004433 3.4e-14 82.0 95 46.3
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-14 81.3 120 40.0
CAN.G295.8 Capsicum annuum HOM05D000002 ORTHO05D000001 3.7e-13 78.6 124 39.5
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.7e-13 78.6 120 40.0
Nn1g02074 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.7e-13 78.6 83 50.6
RcHm_v2.0_Chr5g0017901 Rosa chinensis HOM05D000002 ORTHO05D000001 4.8e-13 78.2 112 36.6
CAN.G1473.7 Capsicum annuum HOM05D000002 ORTHO05D004433 6.3e-13 77.8 112 40.2
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.3e-13 77.4 93 46.2
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 8.3e-13 77.4 112 36.6
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 1.4e-12 76.6 96 40.6
CAN.G492.33 Capsicum annuum HOM05D000002 ORTHO05D004433 1.2e-11 73.6 60 58.3
GSVIVG01017482001 Vitis vinifera HOM05D000002 ORTHO05D004433 2.0e-11 72.8 61 55.7
Oeu064284.1 Olea europaea HOM05D000002 ORTHO05D004433 2.7e-11 72.4 54 61.1
SHI18394 Sapria himalayana HOM05D000002 ORTHO05D004433 2.7e-11 72.4 54 63.0
ECA247G1586 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-11 72.0 77 48.1
CSS0046023 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.3e-10 70.1 103 39.8
Nn3g20326 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-10 69.7 83 45.8
Oeu006707.1 Olea europaea HOM05D000002 ORTHO05D004433 3.8e-10 68.6 78 46.2
CANSAT80G0509 Cannabis sativa HOM05D000054 ORTHO05D000286 6.6e-10 67.8 97 40.2
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 6.6e-10 67.8 53 60.4
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 1.1e-09 67.0 93 38.7
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-08 62.0 120 31.7
Nn6g35291 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.6e-08 62.0 52 59.6
CSS0044983 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.7e-08 61.6 35 71.4
SHI05544 Sapria himalayana HOM05D000002 ORTHO05D004433 4.7e-08 61.6 70 44.3
SHI07223 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-07 59.3 57 50.9
Rhsim06G0133100 Rhododendron simsii HOM05D004563 ORTHO05D002944 5.2e-07 58.2 107 37.4
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-06 55.1 94 35.1
ECA246G0113 Erigeron canadensis HOM05D000082 ORTHO05D000038 4.4e-06 55.1 53 45.3
CAN.G1029.1 Capsicum annuum HOM05D000002 ORTHO05D004433 5.7e-06 54.7 75 42.7
TPR.G28647 Trifolium pratense HOM05D000002 ORTHO05D000001 9.8e-06 53.9 111 31.5


User provided reference genes

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