Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.16g101690 Amaranthus hybridus HOM05D004795 ORTHO05D005518 8.6e-120 433.7 227 100.0
Ah.06g188560 Amaranthus hybridus HOM05D004795 ORTHO05D005518 3.3e-79 298.9 160 96.9
AUR62023290 Chenopodium quinoa HOM05D004795 ORTHO05D005518 1.0e-56 224.2 324 46.6
AUR62043981 Chenopodium quinoa HOM05D004795 ORTHO05D005518 6.9e-53 211.5 267 50.6
AUR62009011 Chenopodium quinoa HOM05D004795 ORTHO05D005518 1.9e-50 203.4 305 45.2
Dinv33956 Davidia involucrata HOM05D001490 ORTHO05D001450 2.2e-35 153.3 194 53.1
Nitab4.5_0000912g0060 Nicotiana tabacum HOM05D004795 ORTHO05D005518 1.1e-34 151.0 222 44.6
Sopen02g030830 Solanum pennellii HOM05D004795 ORTHO05D005518 1.1e-34 151.0 227 46.7
PGSC0003DMG402026390 Solanum tuberosum HOM05D004795 ORTHO05D005518 1.1e-34 151.0 227 44.9
CAN.G625.30 Capsicum annuum HOM05D004795 ORTHO05D005518 7.2e-34 148.3 213 47.9
MSTRG.3555 Avicennia marina HOM05D004795 ORTHO05D005518 1.4e-32 144.1 221 45.2
Rhsim10G0068600 Rhododendron simsii HOM05D004795 ORTHO05D005518 3.0e-32 142.9 227 44.5
Sc11g0008370 Simmondsia chinensis HOM05D004795 ORTHO05D005518 5.2e-32 142.1 197 50.8
DCAR_025909 Daucus carota HOM05D004795 ORTHO05D005518 1.2e-31 141.0 213 50.7
MD17G1245500 Malus domestica HOM05D004795 ORTHO05D005518 5.7e-31 138.7 225 45.8
Cc07_g08730 Coffea canephora HOM05D004795 ORTHO05D005518 7.5e-31 138.3 234 44.4
Thecc.04G132300 Theobroma cacao HOM05D004795 ORTHO05D005518 2.2e-30 136.7 238 42.4
QL02p051034 Quercus lobata HOM05D004795 ORTHO05D005518 3.7e-30 136.0 205 46.8
QL12p016552 Quercus lobata HOM05D004795 ORTHO05D005518 3.7e-30 136.0 205 46.8
MD09G1253700 Malus domestica HOM05D004795 ORTHO05D005518 1.1e-29 134.4 225 43.6
CANSAT78G0274 Cannabis sativa HOM05D004795 ORTHO05D005518 1.8e-29 133.7 222 44.6
Duzib138G0938 Durio zibethinus HOM05D004795 ORTHO05D005518 1.8e-29 133.7 221 43.9
Prupe.3G143600 Prunus persica HOM05D004795 ORTHO05D005518 2.4e-29 133.3 217 44.2
Oeu016627.1 Olea europaea HOM05D004795 ORTHO05D005518 3.1e-29 132.9 211 45.0
Lsat_1_v5_gn_4_154580 Lactuca sativa HOM05D004795 ORTHO05D005518 1.6e-28 130.6 206 45.6
COL.COLO4_09348 Corchorus olitorius HOM05D004795 ORTHO05D005518 2.7e-28 129.8 223 44.4
Duzib211G0180 Durio zibethinus HOM05D004795 ORTHO05D005518 4.5e-28 129.0 207 45.4
Peaxi162Scf00394g00712 Petunia axillaris HOM05D004795 ORTHO05D005518 5.9e-28 128.6 175 48.6
ClCG05G012330 Citrullus lanatus HOM05D004795 ORTHO05D005518 7.7e-28 128.3 211 46.4
Sabra04G0081300 Salix brachista HOM05D004795 ORTHO05D005518 1.3e-27 127.5 212 44.3
Ciclev10012794m.g Citrus clementina HOM05D004795 ORTHO05D005518 1.7e-27 127.1 229 42.8
Glyma.08G366700 Glycine max HOM05D004795 ORTHO05D005518 1.7e-27 127.1 183 50.8
TWI77G0518 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 1.7e-27 127.1 220 41.8
CsaV3_3G020240 Cucumis sativus L. HOM05D004795 ORTHO05D005518 2.2e-27 126.7 188 47.3
Cfa007915 Carpinus fangiana HOM05D004795 ORTHO05D005518 3.8e-27 125.9 218 43.1
Eucgr.J01506 Eucalyptus grandis HOM05D004795 ORTHO05D005518 3.8e-27 125.9 210 47.6
Oeu050378.1 Olea europaea HOM05D004795 ORTHO05D005518 5.0e-27 125.6 211 44.5
Manes.02G069600 Manihot esculenta HOM05D004795 ORTHO05D005518 6.5e-27 125.2 213 44.6
TWI53G1522 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 8.5e-27 124.8 205 43.9
Gohir.D11G325700 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.5e-26 124.0 209 42.1
Gohir.D11G325800 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.5e-26 123.2 209 42.1
Gohir.D11G326300 Gossypium hirsutum HOM05D004795 ORTHO05D005518 4.2e-26 122.5 230 40.4
Duzib133G0847 Durio zibethinus HOM05D004795 ORTHO05D005518 9.4e-26 121.3 206 43.2
Phvul.008G007200 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 1.6e-25 120.6 187 42.8
PGR004G2449 Punica granatum HOM05D004795 ORTHO05D005518 2.1e-25 120.2 206 44.7
Oeu039734.1 Olea europaea HOM05D004795 ORTHO05D005518 4.7e-25 119.0 206 44.7
TAR629G1480 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.8e-24 117.1 224 42.4
SGA_v2.0_scaffold115G32104 Striga asiatica HOM05D004795 ORTHO05D005518 2.3e-24 116.7 172 44.2
CiPaw.03G062800 Carya illinoinensis HOM05D004795 ORTHO05D005518 3.0e-24 116.3 222 40.5
CiPaw.04G043000 Carya illinoinensis HOM05D004795 ORTHO05D005518 5.2e-24 115.5 237 39.2
Sed0015257 Sechium edule HOM05D004795 ORTHO05D005518 5.2e-24 115.5 206 41.3
HanXRQChr11g0330661 Helianthus annuus HOM05D004795 ORTHO05D005518 6.8e-24 115.2 182 47.8
Nn3g17899 Nelumbo nucifera HOM05D004795 ORTHO05D005518 6.8e-24 115.2 223 42.2
Atru.chr1.1662 Acer truncatum HOM05D004795 ORTHO05D005518 1.2e-23 114.4 208 43.8
Manes.01G111300 Manihot esculenta HOM05D004795 ORTHO05D005518 1.2e-23 114.4 210 43.8
RcHm_v2.0_Chr2g0148201 Rosa chinensis HOM05D004795 ORTHO05D005518 2.0e-23 113.6 194 42.8
TAR622G0902 Trochodendron aralioides HOM05D004795 ORTHO05D005518 2.0e-23 113.6 222 43.7
Glyma.13G045200 Glycine max HOM05D004795 ORTHO05D005518 2.6e-23 113.2 184 45.1
Potri.017G116100 Populus trichocarpa HOM05D004795 ORTHO05D005518 2.6e-23 113.2 245 39.2
MELO3C023735.2 Cucumis melo HOM05D004795 ORTHO05D005518 3.4e-23 112.8 176 44.9
PGR042G3836 Punica granatum HOM05D004795 ORTHO05D005518 3.4e-23 112.8 202 44.6
Aa31LG9G17140 Aethionema arabicum HOM05D004795 ORTHO05D005518 4.4e-23 112.5 245 41.2
Sabra17G0096100 Salix brachista HOM05D004795 ORTHO05D005518 4.4e-23 112.5 245 39.2
HanXRQChr11g0325401 Helianthus annuus HOM05D004795 ORTHO05D005518 5.7e-23 112.1 188 43.1
Haze_14167 Corylus avellana HOM05D004795 ORTHO05D005518 7.5e-23 111.7 203 44.8
FAN14G2363 Fragaria x ananassa HOM05D004795 ORTHO05D005518 7.5e-23 111.7 191 46.1
FAN14G5069 Fragaria x ananassa HOM05D004795 ORTHO05D005518 7.5e-23 111.7 191 46.1
VMungo0464G1679 Vigna mungo HOM05D004795 ORTHO05D005518 9.8e-23 111.3 213 41.3
BcaB06g27183 Brassica carinata HOM05D004795 ORTHO05D005518 1.3e-22 110.9 227 39.6
Cpa.g.sc170.57 Carica papaya HOM05D004795 ORTHO05D005518 1.7e-22 110.5 213 42.7
VMungo1383G1737 Vigna mungo HOM05D004795 ORTHO05D005518 1.7e-22 110.5 184 44.6
FAN09G4185 Fragaria x ananassa HOM05D004795 ORTHO05D005518 2.2e-22 110.2 175 48.0
FAN05G2248 Fragaria x ananassa HOM05D004795 ORTHO05D005518 2.8e-22 109.8 191 45.5
Hma1.2p1_1109F.1_g258120 Hydrangea macrophylla HOM05D004795 ORTHO05D005518 2.8e-22 109.8 223 39.5
Ca_08078_v3 Cicer arietinum L. HOM05D004795 ORTHO05D005518 4.9e-22 109.0 184 42.4
TPR.G31528 Trifolium pratense HOM05D004795 ORTHO05D005518 1.4e-21 107.5 197 38.6
Migut.L00330 Erythranthe guttata HOM05D004795 ORTHO05D005518 2.4e-21 106.7 238 37.0
FAN02G3195 Fragaria x ananassa HOM05D004795 ORTHO05D005518 2.4e-21 106.7 189 45.0
THA.LOC104805574 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 2.4e-21 106.7 230 38.7
FvH4_6g36230 Fragaria vesca HOM05D004795 ORTHO05D005518 5.4e-21 105.5 190 44.7
Sp5g21970 Schrenkiella parvula HOM05D004795 ORTHO05D005518 9.1e-21 104.8 190 39.5
arahy.Tifrunner.gnm1.ann1.HZ9SBP Arachis hypogaea HOM05D001490 ORTHO05D005518 1.2e-20 104.4 224 39.7
Carub.0002s1332 Capsella rubella HOM05D004795 ORTHO05D005518 1.2e-20 104.4 199 42.2
Glyma.18G295700 Glycine max HOM05D004795 ORTHO05D005518 1.2e-20 104.4 218 39.4
A04p11270 Brassica napus HOM05D004795 ORTHO05D005518 2.0e-20 103.6 226 38.5
BraA04t16787Z Brassica rapa HOM05D004795 ORTHO05D005518 2.0e-20 103.6 226 38.5
Sp7g03720 Schrenkiella parvula HOM05D004795 ORTHO05D005518 2.0e-20 103.6 226 39.4
BcaC02g09641 Brassica carinata HOM05D004795 ORTHO05D005518 3.5e-20 102.8 226 38.5
BolC4t26077H Brassica oleracea HOM05D004795 ORTHO05D005518 3.5e-20 102.8 226 38.5
THA.LOC104822635 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 3.5e-20 102.8 227 41.4
TAR371G0696 Trochodendron aralioides HOM05D004795 ORTHO05D005518 7.7e-20 101.7 202 43.1
Nitab4.5_0004416g0090 Nicotiana tabacum HOM05D004795 ORTHO05D005518 1.0e-19 101.3 195 40.0
Solyc02g086140.2 Solanum lycopersicum HOM05D004795 ORTHO05D005518 1.3e-19 100.9 128 53.1
CARHR214290 Cardamine hirsuta HOM05D004795 ORTHO05D005518 2.3e-19 100.1 218 39.4
Lj2g0010000 Lotus japonicus HOM05D004795 ORTHO05D005518 2.3e-19 100.1 215 36.7
Thhalv10019032m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 2.9e-19 99.8 199 36.7
Gorai.007G182000 Gossypium raimondii HOM05D004795 ORTHO05D005518 2.9e-19 99.8 215 40.5
Thhalv10027906m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 3.8e-19 99.4 219 40.2
Phvul.004G066100 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 3.8e-19 99.4 211 42.7
C04p44990 Brassica napus HOM05D004795 ORTHO05D005518 5.0e-19 99.0 227 37.9
Gohir.A11G163900 Gossypium hirsutum HOM05D004795 ORTHO05D005518 5.0e-19 99.0 215 40.0
Lj1g0003158 Lotus japonicus HOM05D004795 ORTHO05D005518 5.0e-19 99.0 193 40.9
BraA02t06447Z Brassica rapa HOM05D004795 ORTHO05D005518 1.5e-18 97.4 183 42.6
BcaC03g14785 Brassica carinata HOM05D004795 ORTHO05D005518 4.3e-18 95.9 183 39.3
C02p22330 Brassica napus HOM05D004795 ORTHO05D005518 4.3e-18 95.9 177 40.1
Aa31LG2G3430 Aethionema arabicum HOM05D004795 ORTHO05D005518 9.5e-18 94.7 204 38.2
AT5G38300 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 9.5e-18 94.7 236 37.3
BolC2t08386H Brassica oleracea HOM05D004795 ORTHO05D005518 9.5e-18 94.7 180 40.0
AT1G67035 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 1.6e-17 94.0 201 39.8
ECA232G0641 Erigeron canadensis HOM05D000072 ORTHO05D000026 2.1e-17 93.6 162 45.7
A07p33770 Brassica napus HOM05D004795 ORTHO05D005518 2.8e-17 93.2 179 40.2
Medtr7g082230 Medicago truncatula HOM05D004795 ORTHO05D005518 6.1e-17 92.0 176 38.1
AL2G25370 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 8.0e-17 91.7 189 40.7
Glyma.19G049900 Glycine max HOM05D004795 ORTHO05D005518 8.0e-17 91.7 215 36.7
BraA07t31003Z Brassica rapa HOM05D004795 ORTHO05D005518 1.0e-16 91.3 180 41.7
Psat3g098240 Pisum sativum HOM05D004795 ORTHO05D005518 1.0e-16 91.3 180 40.0
Carub.0005s1274 Capsella rubella HOM05D004795 ORTHO05D005518 2.3e-16 90.1 222 36.0
BcaB05g24226 Brassica carinata HOM05D004795 ORTHO05D005518 3.0e-16 89.7 186 37.6
Lalb_Chr10g0091311 Lupinus albus HOM05D004795 ORTHO05D005518 3.0e-16 89.7 196 40.8
AL7G52500 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 1.2e-15 87.8 238 37.0
Aqoxy3G00247 Aquilegia oxysepala HOM05D004795 ORTHO05D005518 1.5e-15 87.4 201 38.8
Lalb_Chr02g0158191 Lupinus albus HOM05D004795 ORTHO05D005518 3.4e-15 86.3 176 35.8
CARHR059450 Cardamine hirsuta HOM05D004795 ORTHO05D005518 7.5e-15 85.1 186 35.5
unitig_32.g11886 Utricularia gibba HOM05D004795 ORTHO05D005518 2.2e-14 83.6 165 38.8
Gohir.D11G170200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 7.0e-13 78.6 282 32.6
Gorai.008G056400 Gossypium raimondii HOM05D004795 ORTHO05D005518 7.0e-13 78.6 194 36.6
Gohir.D12G053200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.2e-12 77.8 194 35.6
BolC6t39123H Brassica oleracea HOM05D004795 ORTHO05D005518 1.6e-12 77.4 210 33.8
BcaNung06250 Brassica carinata HOM05D004795 ORTHO05D005518 2.7e-12 76.6 216 35.2
Medtr6g018780 Medicago truncatula HOM05D004795 ORTHO05D005518 2.7e-12 76.6 119 46.2
PSO532G0010 Papaver somniferum HOM05D004795 ORTHO05D005518 3.5e-12 76.3 151 36.4
C06p43160 Brassica napus HOM05D004795 ORTHO05D005518 7.8e-12 75.1 215 33.5
TPR.G32442 Trifolium pratense HOM05D004795 ORTHO05D005518 1.0e-11 74.7 118 46.6
SalBow5G0757 Salvia bowleyana HOM05D004795 ORTHO05D005518 2.3e-11 73.6 91 57.1
PSO541G1476 Papaver somniferum HOM05D004795 ORTHO05D005518 3.0e-11 73.2 165 33.9
Gorai.007G356700 Gossypium raimondii HOM05D004795 ORTHO05D005518 3.9e-11 72.8 183 35.0
Gohir.A12G054400 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.1e-10 71.2 174 36.2
PSO541G4271 Papaver somniferum HOM05D004795 ORTHO05D005518 1.5e-10 70.9 161 33.5
MBI09_g36997_MAGBIO Magnolia biondii HOM05D004795 ORTHO05D005518 3.6e-09 66.2 172 36.6
Potri.004G098200 Populus trichocarpa HOM05D004795 ORTHO05D005518 6.2e-09 65.5 121 38.8
CAN.G1425.14 Capsicum annuum HOM05D004795 ORTHO05D005518 1.8e-08 63.9 69 55.1
CAN.G358.61 Capsicum annuum HOM05D004795 ORTHO05D005518 2.3e-08 63.5 74 55.4
SalBow7G1622 Salvia bowleyana HOM05D004795 ORTHO05D005518 5.2e-08 62.4 124 46.0
SalBow7G4115 Salvia bowleyana HOM05D004795 ORTHO05D005518 5.2e-08 62.4 124 46.0
Psat1g081000 Pisum sativum HOM05D004795 ORTHO05D005518 6.8e-08 62.0 261 29.9
ATR0752G028 Amborella trichopoda HOM05D004795 ORTHO05D005518 1.5e-07 60.8 183 33.9
Gorai.001G202200 Gossypium raimondii HOM05D004795 ORTHO05D005518 2.0e-07 60.5 151 33.8
Thecc.07G096700 Theobroma cacao HOM05D004795 ORTHO05D002259 4.4e-07 59.3 99 41.4
unitig_748.g8746 Utricularia gibba HOM05D004795 ORTHO05D005518 8.3e-06 55.1 129 36.4


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