Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 1.3e-88 329.7 173 100.0
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 1.4e-53 213.4 174 69.5
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 2.5e-50 202.6 173 68.8
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 1.7e-35 153.3 145 62.8
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 3.3e-31 139.0 162 53.7
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 7.4e-31 137.9 161 52.2
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 2.8e-30 136.0 163 52.8
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 6.3e-30 134.8 109 67.0
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 1.4e-29 133.7 128 60.9
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 5.3e-29 131.7 130 59.2
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 5.3e-29 131.7 184 50.5
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 5.3e-29 131.7 114 64.9
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 1.2e-28 130.6 128 59.4
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 2.6e-28 129.4 134 57.5
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 4.5e-28 128.6 171 51.5
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 1.0e-27 127.5 174 47.1
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 1.7e-27 126.7 128 58.6
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 2.2e-27 126.3 163 52.8
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 2.2e-27 126.3 117 62.4
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 2.2e-27 126.3 117 62.4
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 2.9e-27 125.9 173 49.7
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 2.9e-27 125.9 96 71.9
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 3.8e-27 125.6 90 75.6
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 5.0e-27 125.2 134 56.0
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 5.0e-27 125.2 180 49.4
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 5.0e-27 125.2 180 49.4
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 5.0e-27 125.2 180 49.4
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 6.5e-27 124.8 109 64.2
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 6.5e-27 124.8 173 49.1
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 6.5e-27 124.8 176 49.4
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 8.5e-27 124.4 134 53.0
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.1e-26 124.0 109 61.5
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 1.5e-26 123.6 178 49.4
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.5e-26 123.6 134 53.0
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 1.5e-26 123.6 128 57.8
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 1.5e-26 123.6 128 57.8
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 1.5e-26 123.6 168 48.8
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 1.5e-26 123.6 164 53.0
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 1.9e-26 123.2 173 47.4
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 1.9e-26 123.2 90 72.2
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 3.2e-26 122.5 183 46.4
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 5.5e-26 121.7 129 56.6
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 5.5e-26 121.7 129 56.6
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 5.5e-26 121.7 129 56.6
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 7.2e-26 121.3 92 71.7
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 9.4e-26 120.9 145 51.7
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 1.2e-25 120.6 177 43.5
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 1.2e-25 120.6 155 52.3
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 1.2e-25 120.6 92 71.7
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 1.2e-25 120.6 173 49.1
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 1.6e-25 120.2 159 50.3
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 1.6e-25 120.2 126 55.6
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 1.6e-25 120.2 98 67.3
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 2.1e-25 119.8 140 52.9
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 2.7e-25 119.4 98 67.3
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 8.0e-25 117.9 85 72.9
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 8.0e-25 117.9 176 47.7
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 8.0e-25 117.9 162 48.8
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 1.8e-24 116.7 100 67.0
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 1.8e-24 116.7 144 51.4
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 3.0e-24 115.9 133 52.6
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 3.0e-24 115.9 168 48.8
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 4.0e-24 115.5 133 54.1
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 6.7e-24 114.8 180 43.3
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 6.7e-24 114.8 109 62.4
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 8.8e-24 114.4 133 52.6
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 1.1e-23 114.0 87 73.6
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 2.0e-23 113.2 168 44.0
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 2.0e-23 113.2 168 48.2
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 3.3e-23 112.5 174 42.5
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 3.3e-23 112.5 124 53.2
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 4.4e-23 112.1 124 54.0
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 5.7e-23 111.7 158 48.1
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 5.7e-23 111.7 158 48.1
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 5.7e-23 111.7 130 53.8
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 7.5e-23 111.3 160 50.0
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 9.7e-23 110.9 144 50.0
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.7e-22 110.2 169 46.2
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 2.2e-22 109.8 78 76.9
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 4.8e-22 108.6 163 44.8
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 4.8e-22 108.6 159 47.2
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 6.3e-22 108.2 151 47.0
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 8.2e-22 107.8 88 65.9
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 2.4e-21 106.3 77 74.0
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 2.4e-21 106.3 175 42.3
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 3.5e-20 102.4 117 53.0
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 4.5e-20 102.1 73 75.3
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 5.9e-20 101.7 171 45.0
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 1.3e-19 100.5 168 43.5
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 1.3e-19 100.5 82 67.1
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 2.9e-19 99.4 173 45.1
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 3.8e-19 99.0 85 67.1
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 1.1e-18 97.4 186 38.7
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 1.5e-18 97.1 104 55.8
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 5.5e-18 95.1 65 72.3
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 1.2e-17 94.0 106 52.8
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 1.2e-17 94.0 176 40.3
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 2.7e-17 92.8 161 44.1
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 5.2e-16 88.6 60 71.7
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 4.4e-15 85.5 73 63.0
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 5.4e-13 78.6 102 47.1
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 1.0e-11 74.3 100 46.0
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 2.9e-11 72.8 77 54.5
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 4.2e-10 68.9 104 44.2
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 2.8e-06 56.2 101 34.7


User provided reference genes

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