Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 1.7e-88 329.3 169 100.0
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.0e-48 197.2 183 62.3
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.6e-46 189.9 176 63.1
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 8.8e-45 184.1 116 78.4
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 3.6e-38 162.2 102 79.4
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 6.1e-38 161.4 108 74.1
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 8.0e-38 161.0 102 77.5
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.8e-37 159.8 126 64.3
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 6.8e-37 157.9 126 63.5
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.2e-36 157.1 124 66.1
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 1.5e-36 156.8 97 79.4
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 3.4e-36 155.6 103 74.8
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 4.4e-36 155.2 100 75.0
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 5.7e-36 154.8 97 77.3
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 5.7e-36 154.8 130 60.8
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 5.7e-36 154.8 100 74.0
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 1.3e-35 153.7 97 77.3
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 1.3e-35 153.7 121 65.3
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.7e-35 153.3 103 73.8
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 2.2e-35 152.9 124 66.9
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 2.2e-35 152.9 93 78.5
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 2.2e-35 152.9 94 78.7
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 2.8e-35 152.5 103 72.8
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 2.8e-35 152.5 98 76.5
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 2.8e-35 152.5 82 87.8
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 4.9e-35 151.8 103 71.8
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 4.9e-35 151.8 103 71.8
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 4.9e-35 151.8 103 71.8
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 4.9e-35 151.8 103 71.8
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 4.9e-35 151.8 86 82.6
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 4.9e-35 151.8 119 65.5
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 4.9e-35 151.8 86 82.6
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 6.3e-35 151.4 107 70.1
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 6.3e-35 151.4 104 70.2
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 6.3e-35 151.4 85 82.4
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 6.3e-35 151.4 88 81.8
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 8.3e-35 151.0 87 81.6
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 1.1e-34 150.6 104 73.1
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 1.1e-34 150.6 104 73.1
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.1e-34 150.6 95 76.8
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.1e-34 150.6 95 76.8
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 1.1e-34 150.6 82 85.4
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 1.4e-34 150.2 151 55.6
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 1.4e-34 150.2 98 75.5
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 1.4e-34 150.2 131 61.8
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 1.4e-34 150.2 82 85.4
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 1.4e-34 150.2 131 59.5
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 1.4e-34 150.2 94 76.6
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 1.8e-34 149.8 104 70.2
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 1.8e-34 149.8 104 69.2
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.8e-34 149.8 109 67.9
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 2.4e-34 149.4 86 82.6
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 2.4e-34 149.4 82 84.1
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 3.1e-34 149.1 151 55.0
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 3.1e-34 149.1 106 67.9
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 3.1e-34 149.1 106 67.9
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 3.1e-34 149.1 82 85.4
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 4.1e-34 148.7 115 65.2
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 5.4e-34 148.3 110 67.3
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 5.4e-34 148.3 84 82.1
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 7.0e-34 147.9 83 81.9
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 9.2e-34 147.5 86 80.2
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 1.2e-33 147.1 89 79.8
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 1.2e-33 147.1 88 77.3
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 1.6e-33 146.7 81 82.7
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 1.6e-33 146.7 83 80.7
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.6e-33 146.7 131 58.0
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 1.6e-33 146.7 104 71.2
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 2.0e-33 146.4 90 75.6
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 2.0e-33 146.4 80 86.2
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 2.0e-33 146.4 81 84.0
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 3.5e-33 145.6 109 65.1
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 3.5e-33 145.6 79 86.1
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 7.8e-33 144.4 102 72.5
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 1.0e-32 144.1 99 71.7
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 1.7e-32 143.3 90 76.7
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 2.9e-32 142.5 80 82.5
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 3.9e-32 142.1 99 68.7
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 5.0e-32 141.7 93 72.0
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 5.0e-32 141.7 86 77.9
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 6.6e-32 141.4 114 63.2
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 6.6e-32 141.4 90 74.4
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 1.1e-31 140.6 100 70.0
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 1.5e-31 140.2 91 73.6
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 1.5e-31 140.2 99 70.7
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 1.9e-31 139.8 102 68.6
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 3.3e-31 139.0 151 51.7
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 4.3e-31 138.7 112 62.5
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 1.2e-30 137.1 91 71.4
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.6e-30 136.7 80 78.8
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 1.0e-29 134.0 91 70.3
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 1.7e-27 126.7 70 84.3
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 4.9e-27 125.2 79 70.9
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 1.4e-26 123.6 76 73.7
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 4.1e-26 122.1 78 69.2
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 5.4e-26 121.7 67 85.1
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 1.9e-23 113.2 128 52.3
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 3.3e-23 112.5 76 67.1
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 2.1e-22 109.8 76 69.7
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 1.8e-21 106.7 194 39.2
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 4.0e-21 105.5 80 62.5
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.5e-20 103.6 54 85.2
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 3.7e-19 99.0 122 50.0
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 1.1e-13 80.9 58 70.7
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 1.4e-13 80.5 74 60.8
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 1.2e-06 57.4 50 52.0


User provided reference genes

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