Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.12g062920 Amaranthus hybridus HOM05D004414 ORTHO05D001824 4.2e-159 564.7 292 100.0
EL10Ac2g02826 Beta vulgaris HOM05D004414 ORTHO05D001824 2.1e-78 296.6 276 59.4
AUR62026844 Chenopodium quinoa HOM05D004414 ORTHO05D001824 8.6e-72 274.6 286 56.6
AUR62037207 Chenopodium quinoa HOM05D004414 ORTHO05D001824 7.3e-71 271.6 286 56.6
Ah.10g030650 Amaranthus hybridus HOM05D004414 ORTHO05D001824 1.2e-68 264.2 249 60.6
Sc10g0004350 Simmondsia chinensis HOM05D004414 ORTHO05D001824 8.7e-40 168.3 224 44.2
Hund13341 Selenicereus undatus HOM05D004414 ORTHO05D001824 6.9e-37 158.7 244 43.0
Dinv32037 Davidia involucrata HOM05D004414 ORTHO05D001824 1.3e-24 117.9 293 30.7
GSVIVG01000669001 Vitis vinifera HOM05D004414 ORTHO05D001824 2.8e-22 110.2 282 33.3
Actinidia19458 Actinidia chinensis HOM05D004414 ORTHO05D001824 2.6e-20 103.6 295 30.5
Prupe.2G032000 Prunus persica HOM05D004414 ORTHO05D001824 3.4e-20 103.2 268 33.2
MD07G1036600 Malus domestica HOM05D004414 ORTHO05D001824 4.5e-20 102.8 286 31.1
Dinv09256 Davidia involucrata HOM05D004414 ORTHO05D001824 1.7e-19 100.9 282 30.9
Thecc.10G167000 Theobroma cacao HOM05D004414 ORTHO05D001824 2.2e-19 100.5 288 30.9
Hma1.2p1_1251F.1_g270410 Hydrangea macrophylla HOM05D004414 ORTHO05D001824 2.9e-19 100.1 279 30.8
COL.COLO4_09982 Corchorus olitorius HOM05D004414 ORTHO05D001824 4.9e-19 99.4 282 31.9
QL04p014278 Quercus lobata HOM05D004414 ORTHO05D001824 8.4e-19 98.6 291 32.0
Duzib128G0092 Durio zibethinus HOM05D004414 ORTHO05D001824 1.1e-18 98.2 265 32.1
CAN.G179.18 Capsicum annuum HOM05D004414 ORTHO05D001824 1.4e-18 97.8 233 34.8
MD02G1290900 Malus domestica HOM05D004414 ORTHO05D001824 1.4e-18 97.8 252 32.1
TWI63G0867 Tripterygium wilfordii HOM05D004414 ORTHO05D001824 1.4e-18 97.8 225 34.2
Duzib114G0298 Durio zibethinus HOM05D004414 ORTHO05D001824 3.2e-18 96.7 277 31.4
Cc00_g03090 Coffea canephora HOM05D004414 ORTHO05D001824 4.2e-18 96.3 221 35.3
Potri.T127206 Populus trichocarpa HOM05D004414 ORTHO05D001824 4.2e-18 96.3 228 33.8
Duzib106G1605 Durio zibethinus HOM05D004414 ORTHO05D001824 2.7e-17 93.6 281 30.2
Eucgr.J01191 Eucalyptus grandis HOM05D004414 ORTHO05D001824 4.6e-17 92.8 270 33.0
Actinidia06255 Actinidia chinensis HOM05D004414 ORTHO05D001824 6.0e-17 92.4 299 29.4
Haze_03067 Corylus avellana HOM05D004414 ORTHO05D001824 7.9e-17 92.0 293 32.4
Migut.B01215 Erythranthe guttata HOM05D004414 ORTHO05D001824 1.0e-16 91.7 266 29.7
Sopen01g030520 Solanum pennellii HOM05D004414 ORTHO05D001824 1.0e-16 91.7 230 31.7
Gohir.A05G280800 Gossypium hirsutum HOM05D004414 ORTHO05D001824 1.8e-16 90.9 288 32.3
Peaxi162Scf00309g00418 Petunia axillaris HOM05D004414 ORTHO05D001824 1.8e-16 90.9 224 33.5
Atru.chr12.1399 Acer truncatum HOM05D004414 ORTHO05D001824 3.0e-16 90.1 280 34.3
CiPaw.14G006500 Carya illinoinensis HOM05D004414 ORTHO05D001824 3.9e-16 89.7 271 31.0
Sabra03G0148200 Salix brachista HOM05D004414 ORTHO05D001824 5.1e-16 89.4 284 27.8
RcHm_v2.0_Chr1g0321761 Rosa chinensis HOM05D004414 ORTHO05D001824 1.1e-15 88.2 276 32.2
Glyma.04G141400 Glycine max HOM05D004414 ORTHO05D001824 2.5e-15 87.0 246 32.9
Gorai.009G296300 Gossypium raimondii HOM05D004414 ORTHO05D001824 2.5e-15 87.0 289 31.5
FAN01G0485 Fragaria x ananassa HOM05D004414 ORTHO05D001824 3.3e-15 86.7 287 31.4
SGA_v2.0_scaffold124G33637 Striga asiatica HOM05D004414 ORTHO05D001824 3.3e-15 86.7 184 34.8
FAN10G4033 Fragaria x ananassa HOM05D004414 ORTHO05D001824 4.3e-15 86.3 212 33.0
Nitab4.5_0002103g0040 Nicotiana tabacum HOM05D004414 ORTHO05D001824 4.3e-15 86.3 245 31.4
AL5G35550 Arabidopsis lyrata HOM05D004414 ORTHO05D001824 5.7e-15 85.9 192 37.0
Eucgr.G03246 Eucalyptus grandis HOM05D004414 ORTHO05D001824 7.4e-15 85.5 261 31.0
FvH4_7g02700 Fragaria vesca HOM05D004414 ORTHO05D001824 9.7e-15 85.1 252 29.8
FAN03G1361 Fragaria x ananassa HOM05D004414 ORTHO05D001824 9.7e-15 85.1 212 33.0
FAN06G1884 Fragaria x ananassa HOM05D004414 ORTHO05D001824 9.7e-15 85.1 252 29.8
Manes.04G165400 Manihot esculenta HOM05D004414 ORTHO05D001824 9.7e-15 85.1 279 29.0
Cpa.g.sc223.17 Carica papaya HOM05D004414 ORTHO05D001824 1.3e-14 84.7 80 58.8
arahy.Tifrunner.gnm1.ann1.19HB3K Arachis hypogaea HOM05D004414 ORTHO05D001824 1.6e-14 84.3 181 36.5
CiPaw.13G012100 Carya illinoinensis HOM05D004414 ORTHO05D001824 1.6e-14 84.3 164 39.0
ClCG05G026710 Citrullus lanatus HOM05D004414 ORTHO05D001824 1.6e-14 84.3 183 36.1
THA.LOC104801739 Tarenaya hassleriana HOM05D004414 ORTHO05D001824 1.6e-14 84.3 232 33.2
vmacro22979 Vaccinium macrocarpon HOM05D004414 ORTHO05D001824 2.1e-14 84.0 263 30.4
Ciclev10004446m.g Citrus clementina HOM05D004414 ORTHO05D001824 2.8e-14 83.6 285 31.6
Glyma.13G199300 Glycine max HOM05D004414 ORTHO05D001824 2.8e-14 83.6 169 39.6
Gohir.D05G282800 Gossypium hirsutum HOM05D004414 ORTHO05D001824 2.8e-14 83.6 288 30.9
Potri.001G025100 Populus trichocarpa HOM05D004414 ORTHO05D001824 2.8e-14 83.6 266 30.8
TWI15G1156 Tripterygium wilfordii HOM05D004414 ORTHO05D001824 4.8e-14 82.8 244 31.6
CANSAT56G3557 Cannabis sativa HOM05D004414 ORTHO05D001824 6.3e-14 82.4 184 38.6
THA.LOC104824187 Tarenaya hassleriana HOM05D004414 ORTHO05D001824 6.3e-14 82.4 229 32.3
Nn7g36611 Nelumbo nucifera HOM05D004414 ORTHO05D001824 8.2e-14 82.0 238 31.9
Rhsim07G0065500 Rhododendron simsii HOM05D004414 ORTHO05D001824 8.2e-14 82.0 264 31.4
TAR369G0352 Trochodendron aralioides HOM05D004414 ORTHO05D001824 8.2e-14 82.0 277 29.2
arahy.Tifrunner.gnm1.ann1.XZ22FX Arachis hypogaea HOM05D004414 ORTHO05D001824 1.4e-13 81.3 181 35.9
MELO3C012461.2 Cucumis melo HOM05D004414 ORTHO05D001824 3.1e-13 80.1 182 36.8
Phvul.005G029800 Phaseolus vulgaris HOM05D004414 ORTHO05D001824 3.1e-13 80.1 217 33.6
MSTRG.20525 Avicennia marina HOM05D004414 ORTHO05D001824 5.3e-13 79.3 280 29.6
CsaV3_5G036640 Cucumis sativus L. HOM05D004414 ORTHO05D001824 6.9e-13 79.0 292 30.1
Sp5g07920 Schrenkiella parvula HOM05D004414 ORTHO05D001824 6.9e-13 79.0 203 34.0
VMungo1080G0433 Vigna mungo HOM05D004414 ORTHO05D001824 6.9e-13 79.0 216 34.3
Aqoxy1G00343 Aquilegia oxysepala HOM05D004414 ORTHO05D001824 9.0e-13 78.6 203 32.5
Glyma.11G154700 Glycine max HOM05D004414 ORTHO05D001824 9.0e-13 78.6 298 29.5
vmacro22867 Vaccinium macrocarpon HOM05D004414 ORTHO05D001824 1.5e-12 77.8 135 37.8
Thhalv10010203m.g Eutrema salsugineum HOM05D004414 ORTHO05D001824 2.0e-12 77.4 204 33.8
Glyma.15G237600 Glycine max HOM05D004414 ORTHO05D001824 2.0e-12 77.4 168 33.3
SalBow5G0980 Salvia bowleyana HOM05D004414 ORTHO05D001824 2.0e-12 77.4 288 28.1
A07p22140 Brassica napus HOM05D004414 ORTHO05D001824 3.4e-12 76.6 167 37.1
Psat5g217560 Pisum sativum HOM05D004414 ORTHO05D001824 3.4e-12 76.6 223 34.1
TPR.G9876 Trifolium pratense HOM05D004414 ORTHO05D001824 1.3e-11 74.7 194 33.0
TAR633G1473 Trochodendron aralioides HOM05D004414 ORTHO05D001824 1.3e-11 74.7 260 30.0
Carub.0005s2112 Capsella rubella HOM05D004414 ORTHO05D001824 1.7e-11 74.3 222 32.9
Sed0007735 Sechium edule HOM05D004414 ORTHO05D001824 1.7e-11 74.3 186 33.9
MBI13_g36284_MAGBIO Magnolia biondii HOM05D004414 ORTHO05D001824 2.9e-11 73.6 207 30.9
Lj9A655T40 Lonicera japonica HOM05D004414 ORTHO05D001824 3.8e-11 73.2 212 29.2
Potri.003G200600 Populus trichocarpa HOM05D004414 ORTHO05D001824 5.0e-11 72.8 155 37.4
BcaC08g44684 Brassica carinata HOM05D004414 ORTHO05D001824 6.5e-11 72.4 176 34.1
C06p22190 Brassica napus HOM05D004414 ORTHO05D001824 6.5e-11 72.4 176 34.1
CSS0028207 Camellia sinensis var. sinensis HOM05D004414 ORTHO05D001824 8.5e-11 72.0 146 32.2
BolC6t37405H Brassica oleracea HOM05D004414 ORTHO05D001824 1.1e-10 71.6 176 33.5
PSO384G4230 Papaver somniferum HOM05D004414 ORTHO05D001824 1.1e-10 71.6 218 28.9
BcaB01g00189 Brassica carinata HOM05D004414 ORTHO05D001824 1.4e-10 71.2 190 33.2
BcaB02g07735 Brassica carinata HOM05D004414 ORTHO05D001824 3.2e-10 70.1 203 33.0
PSO339G3079 Papaver somniferum HOM05D004414 ORTHO05D001824 3.2e-10 70.1 275 25.8
VMungo1127G0555 Vigna mungo HOM05D004414 ORTHO05D001824 3.2e-10 70.1 164 34.8
BcaC07g39817 Brassica carinata HOM05D004414 ORTHO05D001824 9.3e-10 68.6 188 33.5
BraA07t29897Z Brassica rapa HOM05D004414 ORTHO05D001824 1.6e-09 67.8 197 33.0
CARHR164400 Cardamine hirsuta HOM05D004414 ORTHO05D001824 1.6e-09 67.8 196 35.7
Lj3g0012335 Lotus japonicus HOM05D004414 ORTHO05D001824 1.6e-09 67.8 174 34.5
Phvul.011G209100 Phaseolus vulgaris HOM05D004414 ORTHO05D001824 2.7e-09 67.0 228 31.1
SalBow5G2656 Salvia bowleyana HOM05D004414 ORTHO05D001824 3.6e-09 66.6 316 25.6
Cc11_g01940 Coffea canephora HOM05D004414 ORTHO05D001824 8.7e-08 62.0 146 30.8
Aa31sc434G10 Aethionema arabicum HOM05D004414 ORTHO05D001824 1.1e-07 61.6 203 30.0
vmacro13744 Vaccinium macrocarpon HOM05D004414 ORTHO05D001824 1.9e-07 60.8 139 33.1
HanXRQChr04g0095061 Helianthus annuus HOM05D004414 ORTHO05D001824 3.3e-07 60.1 163 30.1
Lalb_Chr01g0007921 Lupinus albus HOM05D004414 ORTHO05D001824 3.3e-07 60.1 296 28.0
BcaC07g39819 Brassica carinata HOM05D004414 ORTHO05D001824 4.3e-07 59.7 199 31.2


User provided reference genes

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