Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g233420 Amaranthus hybridus HOM05D004030 ORTHO05D004952 9.3e-198 693.3 352 100.0
EL10Ac8g20580 Beta vulgaris HOM05D004030 ORTHO05D004952 5.2e-132 474.9 347 72.0
Ah.16g107150 Amaranthus hybridus HOM05D004030 ORTHO05D004952 2.0e-123 446.4 236 93.6
AUR62027698 Chenopodium quinoa HOM05D004030 ORTHO05D004952 6.0e-120 434.9 356 66.6
AUR62031227 Chenopodium quinoa HOM05D004030 ORTHO05D004952 1.6e-117 426.8 332 69.0
Hund21166 Selenicereus undatus HOM05D004030 ORTHO05D004952 3.3e-110 402.5 351 62.7
Dinv16793 Davidia involucrata HOM05D004030 ORTHO05D004952 1.1e-94 350.9 356 56.5
TAR627G0229 Trochodendron aralioides HOM05D004030 ORTHO05D004952 1.6e-88 330.5 352 57.4
GSVIVG01021235001 Vitis vinifera HOM05D004030 ORTHO05D004952 1.6e-88 330.5 350 56.9
Glyma.04G063400 Glycine max HOM05D004030 ORTHO05D004952 5.1e-87 325.5 336 55.7
Phvul.009G089700 Phaseolus vulgaris HOM05D004030 ORTHO05D004952 3.3e-86 322.8 336 56.5
CANSAT80G0365 Cannabis sativa HOM05D004030 ORTHO05D004952 3.7e-85 319.3 355 54.6
Lj6g0006857 Lotus japonicus HOM05D004030 ORTHO05D004952 3.7e-85 319.3 344 54.1
VMungo1309G1983 Vigna mungo HOM05D004030 ORTHO05D004952 3.7e-85 319.3 343 55.1
arahy.Tifrunner.gnm1.ann1.6TT57W Arachis hypogaea HOM05D004030 ORTHO05D004952 6.3e-85 318.5 347 55.0
CSS0010331 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 1.2e-83 314.3 316 57.6
Ca_10308_v3 Cicer arietinum L. HOM05D004030 ORTHO05D004952 1.2e-83 314.3 347 53.9
MELO3C002663.2 Cucumis melo HOM05D004030 ORTHO05D004952 2.0e-83 313.5 347 54.2
Ah.16g108300 Amaranthus hybridus HOM05D004030 ORTHO05D004952 3.4e-83 312.8 169 92.3
Ah.16g108330 Amaranthus hybridus HOM05D004030 ORTHO05D004952 3.4e-83 312.8 169 92.3
Ah.16g108870 Amaranthus hybridus HOM05D004030 ORTHO05D004952 4.5e-83 312.4 169 91.7
CiPaw.09G071100 Carya illinoinensis HOM05D004030 ORTHO05D004952 4.5e-83 312.4 350 52.9
CsaV3_1G033240 Cucumis sativus L. HOM05D004030 ORTHO05D004952 7.6e-83 311.6 347 53.6
ClCG03G007580 Citrullus lanatus HOM05D004030 ORTHO05D004952 1.7e-82 310.5 348 54.0
QL05p048142 Quercus lobata HOM05D004030 ORTHO05D004952 6.5e-82 308.5 349 55.0
Eucgr.E02762 Eucalyptus grandis HOM05D004030 ORTHO05D004952 3.2e-81 306.2 341 52.8
Prupe.4G063800 Prunus persica HOM05D004030 ORTHO05D004952 9.3e-81 304.7 324 53.7
Medtr1g087790 Medicago truncatula HOM05D004030 ORTHO05D004952 6.1e-80 302.0 331 54.1
Sed0004310 Sechium edule HOM05D004030 ORTHO05D004952 6.1e-80 302.0 348 53.7
arahy.Tifrunner.gnm1.ann1.HYDG6Q Arachis hypogaea HOM05D004030 ORTHO05D004952 7.9e-80 301.6 382 49.0
Ah.16g108890 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.3e-79 300.8 185 83.8
ECA248G1387 Erigeron canadensis HOM05D004030 ORTHO05D004952 1.8e-79 300.4 318 54.1
Thecc.06G168200 Theobroma cacao HOM05D004030 ORTHO05D004952 2.3e-79 300.1 345 53.9
Actinidia16784 Actinidia chinensis HOM05D004030 ORTHO05D004952 3.0e-79 299.7 358 52.8
Nn3g19533 Nelumbo nucifera HOM05D004030 ORTHO05D004952 3.0e-79 299.7 379 50.4
MD05G1298600 Malus domestica HOM05D004030 ORTHO05D004952 6.7e-79 298.5 325 54.8
Cfa000628 Carpinus fangiana HOM05D004030 ORTHO05D004952 8.7e-79 298.1 345 53.9
MD10G1277900 Malus domestica HOM05D004030 ORTHO05D004952 8.7e-79 298.1 310 56.5
Cfa013812 Carpinus fangiana HOM05D004030 ORTHO05D004952 1.1e-78 297.7 346 50.9
Manes.16G041300 Manihot esculenta HOM05D004030 ORTHO05D004952 1.1e-78 297.7 360 52.5
MBI07_g09555_MAGBIO Magnolia biondii HOM05D004030 ORTHO05D004952 2.5e-78 296.6 331 53.8
Haze_06204 Corylus avellana HOM05D004030 ORTHO05D004952 3.3e-78 296.2 342 54.7
arahy.Tifrunner.gnm1.ann1.M207AG Arachis hypogaea HOM05D004030 ORTHO05D004952 5.7e-78 295.4 293 58.4
Haze_22485 Corylus avellana HOM05D004030 ORTHO05D004952 9.7e-78 294.7 347 51.0
PGSC0003DMG400028477 Solanum tuberosum HOM05D004030 ORTHO05D004952 1.6e-77 293.9 315 55.2
Migut.M01023 Erythranthe guttata HOM05D004030 ORTHO05D004952 2.8e-77 293.1 364 50.5
Peaxi162Scf00302g00311 Petunia axillaris HOM05D004030 ORTHO05D004952 6.3e-77 292.0 312 54.5
Sc07g0007700 Simmondsia chinensis HOM05D004030 ORTHO05D004952 1.4e-76 290.8 287 57.1
Lalb_Chr18g0054631 Lupinus albus HOM05D004030 ORTHO05D004952 3.1e-76 289.7 325 53.8
Solyc02g072510.3 Solanum lycopersicum HOM05D004030 ORTHO05D004952 4.1e-76 289.3 315 54.9
Sopen02g021480 Solanum pennellii HOM05D004030 ORTHO05D004952 6.9e-76 288.5 315 54.6
CAN.G411.88 Capsicum annuum HOM05D004030 ORTHO05D004952 2.6e-75 286.6 314 54.1
Rhsim13G0189000 Rhododendron simsii HOM05D004030 ORTHO05D004952 5.9e-75 285.4 338 51.8
Ciclev10015509m.g Citrus clementina HOM05D004030 ORTHO05D004952 7.7e-75 285.0 324 52.8
Glyma.06G064600 Glycine max HOM05D004030 ORTHO05D004952 2.9e-74 283.1 299 54.5
Duzib235G1256 Durio zibethinus HOM05D004030 ORTHO05D004952 3.8e-74 282.7 322 54.3
Potri.011G068100 Populus trichocarpa HOM05D004030 ORTHO05D004952 1.1e-73 281.2 360 49.4
CDE10G0195 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 5.5e-73 278.9 311 52.1
Gohir.A10G036100 Gossypium hirsutum HOM05D004030 ORTHO05D004952 5.5e-73 278.9 302 55.3
Gohir.D10G036800 Gossypium hirsutum HOM05D004030 ORTHO05D004952 5.5e-73 278.9 348 50.9
Gorai.011G038700 Gossypium raimondii HOM05D004030 ORTHO05D004952 5.5e-73 278.9 348 50.9
Aqoxy1G02017 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 2.1e-72 276.9 310 54.2
SGA_v2.0_scaffold1G00064 Striga asiatica HOM05D004030 ORTHO05D004952 2.1e-72 276.9 371 49.3
Dinv40699 Davidia involucrata HOM05D004030 ORTHO05D004952 3.6e-72 276.2 272 57.7
Nitab4.5_0005171g0040 Nicotiana tabacum HOM05D004030 ORTHO05D004952 6.1e-72 275.4 355 48.7
Psat6g163160 Pisum sativum HOM05D004030 ORTHO05D004952 7.9e-72 275.0 304 53.0
Oeu043115.1 Olea europaea HOM05D004030 ORTHO05D004952 1.4e-71 274.2 308 53.6
DCAR_020881 Daucus carota HOM05D004030 ORTHO05D004952 6.7e-71 271.9 371 47.7
DCAR_005202 Daucus carota HOM05D004030 ORTHO05D004952 8.8e-71 271.6 346 49.4
Nitab4.5_0007465g0050 Nicotiana tabacum HOM05D004030 ORTHO05D004952 1.1e-70 271.2 377 46.2
ATR0824G134 Amborella trichopoda HOM05D004030 ORTHO05D004952 4.3e-70 269.2 354 47.7
Cc02_g15190 Coffea canephora HOM05D004030 ORTHO05D004952 4.3e-70 269.2 330 50.6
COL.COLO4_31267 Corchorus olitorius HOM05D004030 ORTHO05D004952 2.8e-69 266.5 344 47.4
Duzib160G0274 Durio zibethinus HOM05D004030 ORTHO05D004952 2.4e-68 263.5 344 49.7
TWI39G0053 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 5.3e-68 262.3 354 48.3
HanXRQChr11g0350521 Helianthus annuus HOM05D004030 ORTHO05D004952 9.1e-68 261.5 349 49.3
Potri.004G058700 Populus trichocarpa HOM05D004030 ORTHO05D004952 2.2e-66 256.9 357 47.3
Sabra11G0049100 Salix brachista HOM05D004030 ORTHO05D004952 3.8e-66 256.1 364 46.7
Os01g0759700 Oryza sativa ssp. japonica HOM05D004030 ORTHO05D004952 5.0e-66 255.8 331 47.7
arahy.Tifrunner.gnm1.ann1.JIP48Q Arachis hypogaea HOM05D004030 ORTHO05D004952 7.2e-65 251.9 286 52.8
Zm00001eb370530 Zea mays HOM05D004030 ORTHO05D004952 9.4e-65 251.5 318 47.8
arahy.Tifrunner.gnm1.ann1.G7P63M Arachis hypogaea HOM05D004030 ORTHO05D004952 1.4e-63 247.7 344 47.1
Lsat_1_v5_gn_1_111240 Lactuca sativa HOM05D004030 ORTHO05D004952 3.0e-63 246.5 315 48.6
RcHm_v2.0_Chr5g0011231 Rosa chinensis HOM05D004030 ORTHO05D004952 3.0e-63 246.5 299 50.2
vmacro03922 Vaccinium macrocarpon HOM05D004030 ORTHO05D004952 6.7e-63 245.4 492 37.4
SEGI_23147 Sequoiadendron giganteum HOM05D004030 ORTHO05D004952 2.0e-62 243.8 370 43.2
PSO063G1415 Papaver somniferum HOM05D004030 ORTHO05D004952 3.3e-62 243.0 295 49.2
SalBow8G0896 Salvia bowleyana HOM05D004030 ORTHO05D004952 3.3e-62 243.0 393 42.7
PGR031G0618 Punica granatum HOM05D004030 ORTHO05D004952 1.3e-61 241.1 249 55.0
AL1G42980 Arabidopsis lyrata HOM05D004030 ORTHO05D004952 3.7e-61 239.6 220 58.2
Manes.17G057500 Manihot esculenta HOM05D004030 ORTHO05D004952 8.2e-61 238.4 233 57.9
TPR.G40724 Trifolium pratense HOM05D004030 ORTHO05D004952 8.2e-61 238.4 189 67.7
FvH4_3g07540 Fragaria vesca HOM05D004030 ORTHO05D004952 1.1e-60 238.0 305 47.2
FAN11G3556 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.1e-60 238.0 305 47.2
THA.LOC104820602 Tarenaya hassleriana HOM05D004030 ORTHO05D004952 1.4e-60 237.7 223 60.1
PSO782G4674 Papaver somniferum HOM05D004030 ORTHO05D004952 7.0e-60 235.3 314 46.5
FAN21G1198 Fragaria x ananassa HOM05D004030 ORTHO05D004952 2.0e-59 233.8 305 46.2
FAN25G0294 Fragaria x ananassa HOM05D004030 ORTHO05D004952 2.6e-59 233.4 305 46.6
Sp1g25170 Schrenkiella parvula HOM05D004030 ORTHO05D004952 4.5e-59 232.6 289 49.1
HPP92_021480 Vanilla planifolia HOM05D004030 ORTHO05D004952 5.9e-59 232.3 314 47.5
FvH4_3g37800 Fragaria vesca HOM05D004030 ORTHO05D004952 1.7e-58 230.7 298 47.3
FAN11G0126 Fragaria x ananassa HOM05D004030 ORTHO05D004952 2.9e-58 229.9 298 47.3
AT1G29220 Arabidopsis thaliana HOM05D004030 ORTHO05D004952 1.1e-57 228.0 294 48.3
Aa31LG6G6290 Aethionema arabicum HOM05D004030 ORTHO05D004952 1.9e-57 227.3 223 56.5
Carub.0001s2743 Capsella rubella HOM05D004030 ORTHO05D004952 9.4e-57 224.9 221 57.0
Nn1g02598 Nelumbo nucifera HOM05D004030 ORTHO05D004952 9.4e-57 224.9 251 53.0
CARHR028550 Cardamine hirsuta HOM05D004030 ORTHO05D004952 1.6e-56 224.2 262 53.1
A09p37120 Brassica napus HOM05D004030 ORTHO05D004952 2.1e-56 223.8 226 55.3
BcaB07g32509 Brassica carinata HOM05D004030 ORTHO05D004952 3.6e-56 223.0 238 52.5
Thhalv10008084m.g Eutrema salsugineum HOM05D004030 ORTHO05D004952 6.1e-56 222.2 286 47.9
BcaC05g26946 Brassica carinata HOM05D004030 ORTHO05D004952 8.0e-56 221.9 226 55.8
C05p27930 Brassica napus HOM05D004030 ORTHO05D004952 8.0e-56 221.9 226 55.8
BraA09t39228Z Brassica rapa HOM05D004030 ORTHO05D004952 3.3e-54 216.5 232 53.9
BolC5t31519H Brassica oleracea HOM05D004030 ORTHO05D004952 2.8e-53 213.4 242 52.5
Atru.chr10.1642 Acer truncatum HOM05D004030 ORTHO05D004952 3.5e-51 206.5 262 48.5
FAN16G1462 Fragaria x ananassa HOM05D004030 ORTHO05D004952 3.8e-50 203.0 274 46.4
TWI63G1163 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 7.2e-49 198.7 249 46.6
arahy.Tifrunner.gnm1.ann1.LWKQ47 Arachis hypogaea HOM05D004030 ORTHO05D004952 2.7e-48 196.8 193 56.0
Actinidia35586 Actinidia chinensis HOM05D004030 ORTHO05D004952 1.3e-45 188.0 329 42.6
HPP92_010042 Vanilla planifolia HOM05D004030 ORTHO05D004952 1.8e-44 184.1 272 42.3
Sabra04G0038000 Salix brachista HOM05D004030 ORTHO05D004952 7.0e-44 182.2 173 59.0
Zm00001eb152490 Zea mays HOM05D004030 ORTHO05D004952 1.7e-42 177.6 223 46.6
AagrBONN_evm.TU.Sc2ySwM_362.2754 Anthoceros agrestis HOM05D004030 ORTHO05D004952 3.8e-42 176.4 306 39.2
Mapoly0022s0014 Marchantia polymorpha HOM05D004030 ORTHO05D004952 2.5e-41 173.7 315 40.3
SalBow5G1441 Salvia bowleyana HOM05D004030 ORTHO05D004952 3.2e-41 173.3 239 46.9
Lalb_Chr15g0086161 Lupinus albus HOM05D004030 ORTHO05D004952 5.5e-41 172.6 245 47.8
Lj1A1189T62 Lonicera japonica HOM05D004030 ORTHO05D004952 9.5e-41 171.8 190 54.7
SHI28530 Sapria himalayana HOM05D004030 ORTHO05D004952 1.8e-39 167.5 189 50.3
SMO266G0004 Selaginella moellendorffii HOM05D004030 ORTHO05D004952 7.5e-38 162.2 296 37.2
AagrBONN_evm.TU.Sc2ySwM_344.2041 Anthoceros agrestis HOM05D004030 ORTHO05D004952 9.8e-38 161.8 365 36.4
COL.COLO4_06310 Corchorus olitorius HOM05D004030 ORTHO05D004952 1.6e-35 154.5 234 42.3
Lj9A197T43 Lonicera japonica HOM05D004030 ORTHO05D004952 2.8e-32 143.7 118 69.5
Ah.16g108320 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.0e-31 141.7 69 95.7
Cpa.g.sc7.87 Carica papaya HOM05D004030 ORTHO05D004952 2.6e-30 137.1 117 65.8
Peaxi162Scf00912g00019 Petunia axillaris HOM05D004030 ORTHO05D004952 7.5e-30 135.6 94 70.2
Aqoxy2G00428 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 4.9e-29 132.9 164 48.2
Lsat_1_v5_gn_6_74880 Lactuca sativa HOM05D004030 ORTHO05D004952 6.4e-29 132.5 270 37.4
BcaB03g13895 Brassica carinata HOM05D004030 ORTHO05D004952 8.3e-29 132.1 159 49.7
CAN.G566.51 Capsicum annuum HOM05D004030 ORTHO05D004952 1.5e-25 121.3 197 41.1
CSS0023477 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 1.2e-24 118.2 71 74.6
CSS0003365 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 4.7e-24 116.3 71 73.2
unitig_899.g15398 Utricularia gibba HOM05D004030 ORTHO05D004952 6.2e-24 115.9 313 33.9
Nitab4.5_0000271g0330 Nicotiana tabacum HOM05D004030 ORTHO05D004952 1.4e-23 114.8 123 49.6
SalBow5G5223 Salvia bowleyana HOM05D004030 ORTHO05D004952 3.1e-23 113.6 70 75.7
Nitab4.5_0004602g0020 Nicotiana tabacum HOM05D004030 ORTHO05D004952 8.9e-23 112.1 94 60.6
Actinidia37045 Actinidia chinensis HOM05D004030 ORTHO05D004952 2.0e-22 110.9 256 37.1
CBR_g31948 Chara braunii HOM05D004030 ORTHO05D004952 1.1e-20 105.1 96 49.0
CDE10G0435 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 5.4e-20 102.8 118 52.5
Pp3c22_6900 Physcomitrium patens HOM05D004030 ORTHO05D004952 3.5e-19 100.1 115 42.6
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 5.6e-17 92.8 99 48.5
FAN23G1607 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.4e-12 78.2 98 45.9
MCO08G144 Micromonas commoda HOM05D004030 ORTHO05D004952 7.1e-12 75.9 99 37.4
Pp3c21_660 Physcomitrium patens HOM05D004030 ORTHO05D004952 7.1e-12 75.9 185 29.7
SalBow5G1832 Salvia bowleyana HOM05D004030 ORTHO05D002854 3.0e-10 70.5 173 34.7
Lalb_Chr15g0086171 Lupinus albus HOM05D004030 ORTHO05D004952 7.3e-09 65.9 78 53.8
SalBow5G5317 Salvia bowleyana HOM05D004030 ORTHO05D004952 2.1e-08 64.3 184 32.6
Ah.16g108860 Amaranthus hybridus HOM05D004030 ORTHO05D004952 2.6e-06 57.4 28 92.9
SalBow5G1360 Salvia bowleyana HOM05D004030 ORTHO05D004952 5.8e-06 56.2 64 57.8
SalBow5G5526 Salvia bowleyana HOM05D004030 ORTHO05D004952 5.8e-06 56.2 159 34.0


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