Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 3.3e-267 924.5 463 100.0
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 3.9e-228 794.7 463 86.8
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 1.2e-216 756.5 434 87.3
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 6.7e-212 740.7 436 83.3
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 2.5e-211 738.8 422 86.3
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 4.3e-211 738.0 410 88.8
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 1.3e-210 736.5 442 83.3
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 1.3e-210 736.5 449 82.0
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 3.7e-210 734.9 429 84.4
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 4.8e-210 734.6 441 83.7
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 8.2e-210 733.8 428 83.9
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 8.2e-210 733.8 422 86.5
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 1.1e-209 733.4 410 87.6
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 1.1e-209 733.4 410 87.6
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 1.8e-209 732.6 410 87.6
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 1.8e-209 732.6 410 87.6
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 2.4e-209 732.3 453 81.0
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 2.4e-209 732.3 410 87.6
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 9.1e-209 730.3 453 80.6
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 2.0e-208 729.2 442 81.9
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 2.6e-208 728.8 419 85.4
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 2.6e-208 728.8 427 83.4
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 7.7e-208 727.2 451 80.5
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 1.0e-207 726.9 410 86.8
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 1.0e-207 726.9 475 78.3
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 1.3e-207 726.5 410 86.3
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 2.9e-207 725.3 440 82.5
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 2.9e-207 725.3 432 82.9
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 6.5e-207 724.2 410 87.1
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 6.5e-207 724.2 426 82.6
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 6.5e-207 724.2 422 84.4
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 8.5e-207 723.8 441 83.0
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 8.5e-207 723.8 441 83.0
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 1.1e-206 723.4 441 83.0
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 1.9e-206 722.6 432 84.3
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 1.9e-206 722.6 431 83.5
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 3.2e-206 721.8 420 84.5
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 4.2e-206 721.5 386 92.5
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 4.2e-206 721.5 462 79.4
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 7.2e-206 720.7 435 82.1
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 1.2e-205 719.9 410 86.1
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 2.7e-205 718.8 410 84.9
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 3.6e-205 718.4 410 85.9
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 4.7e-205 718.0 436 81.9
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 1.4e-204 716.5 421 83.4
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 3.0e-204 715.3 386 91.5
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 3.9e-204 714.9 459 78.4
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 5.1e-204 714.5 410 84.6
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 6.7e-204 714.1 409 86.6
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 1.1e-203 713.4 448 79.7
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 1.1e-203 713.4 422 84.1
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 1.1e-203 713.4 410 84.9
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 1.1e-203 713.4 410 84.4
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 1.5e-203 713.0 409 85.3
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 3.3e-203 711.8 409 85.3
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 4.4e-203 711.4 410 84.6
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 7.4e-203 710.7 410 84.9
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 7.4e-203 710.7 411 84.7
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 7.4e-203 710.7 410 84.9
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 1.3e-202 709.9 410 84.9
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 1.3e-202 709.9 409 85.1
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 1.7e-202 709.5 409 85.3
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 1.7e-202 709.5 431 81.7
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 2.2e-202 709.1 427 82.4
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 3.7e-202 708.4 427 82.2
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 8.2e-202 707.2 410 84.9
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 1.1e-201 706.8 463 77.3
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 1.4e-201 706.4 427 82.2
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 1.4e-201 706.4 411 84.4
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 3.1e-201 705.3 410 84.4
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 5.3e-201 704.5 448 78.3
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 7.0e-201 704.1 427 80.8
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 7.0e-201 704.1 427 80.8
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 9.1e-201 703.7 410 84.1
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 1.5e-200 703.0 448 77.9
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 2.0e-200 702.6 410 83.9
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 2.0e-200 702.6 409 83.1
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 3.5e-200 701.8 409 83.1
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 4.5e-200 701.4 410 82.9
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 5.9e-200 701.0 448 77.9
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 7.7e-200 700.7 421 81.2
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 7.7e-200 700.7 448 78.1
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 1.0e-199 700.3 427 80.6
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 1.0e-199 700.3 427 80.6
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 2.9e-199 698.7 421 81.0
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 2.9e-199 698.7 434 82.0
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 6.5e-199 697.6 421 81.0
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 1.9e-198 696.0 389 87.1
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 3.2e-198 695.3 436 80.0
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 4.2e-198 694.9 423 82.0
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 4.2e-198 694.9 423 82.0
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 4.2e-198 694.9 409 82.4
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 2.1e-197 692.6 409 82.4
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 2.1e-197 692.6 409 82.4
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 2.7e-197 692.2 437 79.6
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 6.1e-197 691.0 409 81.9
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 1.0e-196 690.3 413 83.3
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 8.8e-196 687.2 470 74.7
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 3.3e-195 685.3 409 80.7
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 4.4e-195 684.9 419 79.7
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 3.2e-190 668.7 430 78.8
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 3.0e-188 662.1 463 73.7
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 1.0e-183 647.1 384 83.6
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 4.7e-181 638.3 432 75.0
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 6.8e-180 634.4 426 74.9
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 1.5e-179 633.3 489 67.9
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 4.9e-178 628.2 409 78.0
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 5.4e-177 624.8 409 76.5
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 5.4e-177 624.8 410 77.8
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 2.0e-176 622.9 408 75.5
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 4.5e-176 621.7 451 69.0
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 1.3e-175 620.2 410 74.9
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 2.9e-175 619.0 352 86.6
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 2.5e-174 615.9 448 70.5
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 1.0e-172 610.5 449 70.8
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 4.9e-170 601.7 442 72.2
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 8.3e-170 600.9 407 71.5
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 5.8e-163 578.2 421 71.7
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 4.0e-156 555.4 358 77.9
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 2.9e-146 522.7 425 59.5
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 3.7e-146 522.3 548 54.9
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 3.8e-138 495.7 330 75.8
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 4.2e-137 492.3 286 85.0
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 9.3e-129 464.5 421 55.3
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 3.2e-121 439.5 369 61.0
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 2.1e-112 410.2 353 59.8
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 1.1e-108 397.9 276 72.5
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 1.1e-108 397.9 410 51.5
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 1.1e-102 377.9 441 48.8
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 7.7e-99 365.2 228 80.3
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 2.0e-78 297.4 387 43.7
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 1.3e-77 294.7 173 85.0
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 4.1e-76 289.7 185 79.5
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 1.2e-72 278.1 274 55.1
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 1.4e-60 238.0 163 71.8
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 9.2e-60 235.3 358 40.5
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 2.9e-45 187.2 359 36.8
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 8.3e-45 185.7 114 80.7
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 8.9e-31 139.0 152 52.0
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 4.9e-29 133.3 70 88.6
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 8.4e-29 132.5 69 87.0
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 3.5e-27 127.1 81 82.7
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 4.9e-21 106.7 81 65.4
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 1.4e-20 105.1 73 69.9
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 1.6e-19 101.7 66 80.3
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 3.4e-14 84.0 59 72.9
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 2.2e-13 81.3 296 26.0
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea HOM05D004870 ORTHO05D000194 4.9e-13 80.1 61 67.2
RcHm_v2.0_Chr5g0050041 Rosa chinensis HOM05D004870 ORTHO05D347201 1.0e-10 72.4 46 71.7
C02p39510 Brassica napus HOM05D000461 ORTHO05D016800 1.8e-07 61.6 48 60.4
BolC2t09964H Brassica oleracea HOM05D000461 ORTHO05D016800 1.8e-07 61.6 48 60.4
AUR62002710 Chenopodium quinoa HOM05D004870 ORTHO05D138226 5.8e-06 56.6 78 46.2


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