Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 6.9e-116 420.6 209 100.0
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 7.7e-83 310.8 222 73.4
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 3.3e-65 252.3 129 93.0
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 7.3e-65 251.1 135 90.4
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 1.2e-64 250.4 207 65.2
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 1.2e-64 250.4 187 69.5
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 8.0e-64 247.7 196 68.9
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 1.1e-63 247.3 199 66.3
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 2.3e-63 246.1 190 66.8
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 4.0e-63 245.4 170 72.4
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 4.0e-63 245.4 201 63.2
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 6.8e-63 244.6 190 66.3
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 8.9e-63 244.2 216 64.8
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 1.2e-62 243.8 188 66.5
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 1.5e-62 243.4 188 67.0
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 1.5e-62 243.4 214 62.1
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 2.6e-62 242.7 128 90.6
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 2.6e-62 242.7 180 70.6
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 3.4e-62 242.3 212 62.7
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 4.4e-62 241.9 169 72.2
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 4.4e-62 241.9 209 63.2
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 4.4e-62 241.9 219 60.7
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 4.4e-62 241.9 179 70.4
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 7.5e-62 241.1 158 77.8
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 9.8e-62 240.7 128 89.1
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 9.8e-62 240.7 219 60.3
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 9.8e-62 240.7 128 89.8
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 1.3e-61 240.4 196 64.8
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 1.3e-61 240.4 219 60.7
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 1.7e-61 240.0 190 66.3
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 1.7e-61 240.0 206 65.0
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 1.7e-61 240.0 206 64.1
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 1.7e-61 240.0 218 61.5
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 2.9e-61 239.2 198 64.6
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 2.9e-61 239.2 213 63.4
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 2.9e-61 239.2 153 79.1
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 2.9e-61 239.2 176 70.5
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 6.4e-61 238.0 128 89.8
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 6.4e-61 238.0 128 89.1
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 6.4e-61 238.0 178 70.8
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 8.3e-61 237.7 170 70.6
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 8.3e-61 237.7 223 59.6
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 1.4e-60 236.9 175 69.1
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 1.9e-60 236.5 194 64.9
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 2.4e-60 236.1 151 75.5
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 2.4e-60 236.1 151 75.5
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 2.4e-60 236.1 151 75.5
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 2.4e-60 236.1 169 71.0
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 4.1e-60 235.3 128 85.9
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 4.1e-60 235.3 128 88.3
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 4.1e-60 235.3 128 88.3
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 4.1e-60 235.3 218 60.1
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 7.0e-60 234.6 133 83.5
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 7.0e-60 234.6 128 86.7
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 7.0e-60 234.6 128 88.3
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 9.2e-60 234.2 187 66.3
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 9.2e-60 234.2 181 68.0
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 1.2e-59 233.8 191 66.5
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 1.6e-59 233.4 214 60.3
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 1.6e-59 233.4 164 71.3
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 2.7e-59 232.6 177 67.8
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 2.7e-59 232.6 128 86.7
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 2.7e-59 232.6 208 61.1
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 3.5e-59 232.3 128 87.5
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 3.5e-59 232.3 206 62.1
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 3.5e-59 232.3 128 87.5
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 3.5e-59 232.3 159 74.2
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 4.6e-59 231.9 205 61.0
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 6.0e-59 231.5 128 87.5
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 6.0e-59 231.5 217 59.4
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 6.0e-59 231.5 169 69.8
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 7.8e-59 231.1 128 85.2
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 1.0e-58 230.7 201 62.7
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 1.0e-58 230.7 201 62.7
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 3.0e-58 229.2 214 60.7
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 5.1e-58 228.4 128 85.2
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 6.6e-58 228.0 162 70.4
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 1.1e-57 227.3 128 82.8
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 1.1e-57 227.3 128 84.4
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 1.5e-57 226.9 128 85.2
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 1.9e-57 226.5 162 69.8
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 2.5e-57 226.1 128 85.2
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 5.6e-57 224.9 189 62.4
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 9.5e-57 224.2 128 82.8
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 2.1e-56 223.0 121 87.6
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 2.1e-56 223.0 164 70.1
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 2.1e-56 223.0 164 70.1
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 2.8e-56 222.6 167 70.1
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 6.2e-56 221.5 128 83.6
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 6.2e-56 221.5 189 63.5
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 1.4e-55 220.3 128 78.9
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 2.6e-54 216.1 128 78.1
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 6.4e-53 211.5 166 62.7
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 1.2e-51 207.2 128 74.2
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 3.1e-47 192.6 189 54.0
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 6.0e-43 178.3 89 94.4
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 5.1e-42 175.3 89 89.9
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 1.5e-38 163.7 121 62.0
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 8.4e-37 157.9 129 55.0
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 1.0e-34 151.0 125 61.6
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 1.7e-34 150.2 206 46.1
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 7.3e-33 144.8 173 50.9
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 1.1e-31 141.0 127 59.8
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 6.9e-31 138.3 163 49.7
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 2.0e-30 136.7 72 90.3
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 8.4e-29 131.3 77 83.1
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 4.2e-28 129.0 66 89.4
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 5.4e-28 128.6 72 81.9
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 9.3e-28 127.9 151 51.7
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 4.6e-27 125.6 71 78.9
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 3.3e-25 119.4 71 83.1
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 2.9e-21 106.3 56 89.3
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 2.5e-20 103.2 59 81.4


User provided reference genes

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