Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 4.4e-116 421.4 227 100.0
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 3.8e-99 365.2 227 81.5
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 4.9e-99 364.8 224 86.2
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.6e-97 359.8 227 80.6
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.6e-97 359.8 227 80.6
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 2.5e-95 352.4 227 81.5
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 2.6e-92 342.4 227 75.8
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 9.9e-92 340.5 227 76.7
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 1.3e-91 340.1 227 75.8
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 2.2e-91 339.3 227 76.2
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 3.8e-91 338.6 225 76.0
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 6.4e-91 337.8 227 75.8
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 5.4e-90 334.7 227 77.1
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 7.1e-90 334.3 227 74.4
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 9.3e-90 334.0 227 76.2
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 9.3e-90 334.0 227 74.4
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 9.3e-90 334.0 227 75.8
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 1.6e-89 333.2 227 74.4
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 3.5e-89 332.0 227 75.3
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 7.8e-89 330.9 227 74.0
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 1.0e-88 330.5 225 74.2
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 1.0e-88 330.5 227 73.6
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 3.0e-88 328.9 227 73.6
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 3.9e-88 328.6 227 73.6
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 4.3e-87 325.1 227 72.2
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 5.6e-87 324.7 227 73.1
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 5.6e-87 324.7 227 74.4
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 5.6e-87 324.7 227 73.1
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 7.3e-87 324.3 224 73.7
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 1.3e-86 323.6 227 72.7
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 1.3e-86 323.6 227 73.6
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 2.1e-86 322.8 217 77.0
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 2.8e-86 322.4 226 73.0
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 2.8e-86 322.4 227 74.9
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 2.8e-86 322.4 227 73.6
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 2.8e-86 322.4 237 70.0
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 3.6e-86 322.0 227 72.7
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 3.6e-86 322.0 227 72.2
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 3.6e-86 322.0 227 72.7
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 6.2e-86 321.2 227 74.4
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 6.2e-86 321.2 227 74.9
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 6.2e-86 321.2 227 74.0
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 1.1e-85 320.5 227 71.8
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 1.1e-85 320.5 227 71.8
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 1.4e-85 320.1 227 73.1
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.4e-85 320.1 220 74.1
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 1.8e-85 319.7 227 73.1
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 2.4e-85 319.3 225 73.3
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 2.4e-85 319.3 225 73.3
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 3.1e-85 318.9 227 74.0
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 3.1e-85 318.9 227 74.0
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.1e-85 318.9 242 69.8
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 4.0e-85 318.5 225 72.9
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 6.9e-85 317.8 227 74.0
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.2e-84 317.0 227 76.7
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 1.2e-84 317.0 267 64.0
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 1.5e-84 316.6 227 73.6
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 1.5e-84 316.6 227 73.6
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 1.5e-84 316.6 227 73.6
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 2.6e-84 315.8 227 74.0
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 5.8e-84 314.7 227 70.5
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 7.6e-84 314.3 225 73.3
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 9.9e-84 313.9 210 76.7
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 1.3e-83 313.5 224 71.4
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 1.7e-83 313.2 225 70.2
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 8.4e-83 310.8 220 74.1
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 1.4e-82 310.1 228 71.1
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 4.2e-82 308.5 250 63.6
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 5.4e-82 308.1 224 71.4
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 9.3e-82 307.4 227 70.9
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 1.6e-81 306.6 225 69.8
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 2.7e-81 305.8 224 69.6
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.5e-81 305.4 235 70.2
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 3.5e-81 305.4 224 69.2
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 3.5e-81 305.4 225 70.7
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 4.6e-81 305.1 210 74.3
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 7.9e-81 304.3 225 72.4
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 1.8e-80 303.1 224 71.4
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 3.9e-80 302.0 227 70.5
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 5.1e-80 301.6 227 71.8
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 5.1e-80 301.6 227 67.8
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 1.5e-79 300.1 224 71.9
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 2.8e-78 295.8 224 71.9
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 3.7e-78 295.4 260 61.9
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 6.2e-78 294.7 227 66.5
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 9.0e-77 290.8 227 68.3
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 2.0e-76 289.7 227 68.7
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 2.0e-76 289.7 207 72.0
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 3.4e-76 288.9 225 64.9
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 1.3e-75 287.0 227 69.6
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 4.2e-74 282.0 242 63.2
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 1.3e-72 276.9 203 68.5
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 3.9e-72 275.4 194 72.2
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 2.8e-70 269.2 195 75.4
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 4.5e-68 261.9 207 63.8
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 4.2e-66 255.4 222 64.0
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 5.5e-66 255.0 205 62.4
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 2.5e-63 246.1 222 62.2
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 2.5e-63 246.1 222 62.2
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 9.7e-63 244.2 222 62.2
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 9.7e-63 244.2 198 62.1
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 3.1e-61 239.2 193 63.7
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 6.9e-61 238.0 221 53.8
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 9.0e-61 237.7 222 56.3
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 4.2e-58 228.8 208 54.3
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 7.9e-49 198.0 213 49.3
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 3.8e-43 179.1 180 56.1
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 4.2e-42 175.6 139 63.3
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 2.7e-41 172.9 196 43.9
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 5.9e-36 155.2 210 46.7
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.4e-29 134.0 99 70.7
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 7.0e-29 131.7 84 70.2
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 2.2e-27 126.7 163 47.9
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 1.2e-17 94.4 218 32.1
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 3.6e-17 92.8 194 30.9
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 1.9e-10 70.5 220 26.4
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 9.5e-10 68.2 106 47.2
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 2.6e-07 60.1 95 43.2
C05p10030 Brassica napus HOM05D006955 ORTHO05D008701 9.8e-07 58.2 35 77.1


User provided reference genes

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