Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 5.1e-48 195.3 225 100.0
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 4.2e-26 122.5 110 61.8
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 8.8e-24 114.8 106 59.4
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 2.0e-23 113.6 104 60.6
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 2.0e-23 113.6 117 54.7
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 8.2e-22 108.2 112 56.2
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 3.1e-21 106.3 141 46.8
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 3.1e-21 106.3 102 56.9
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 4.1e-21 105.9 112 54.5
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 5.3e-21 105.5 115 52.2
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 2.6e-20 103.2 115 52.2
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 2.6e-20 103.2 115 52.2
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 2.6e-20 103.2 115 52.2
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 2.6e-20 103.2 114 50.9
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 3.4e-20 102.8 112 52.7
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.5e-20 102.4 119 51.3
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 7.7e-20 101.7 112 53.6
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 1.0e-19 101.3 116 51.7
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 1.3e-19 100.9 114 50.0
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.7e-19 100.5 119 50.4
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 1.7e-19 100.5 115 49.6
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 2.2e-19 100.1 114 50.9
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 6.5e-19 98.6 115 51.3
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 8.5e-19 98.2 115 50.4
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 1.9e-18 97.1 114 50.9
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 2.5e-18 96.7 108 50.9
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.7e-17 93.2 108 50.0
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 7.9e-17 91.7 110 50.0
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 5.1e-16 89.0 112 47.3
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 5.1e-16 89.0 84 56.0
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.1e-15 87.8 111 49.5
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.0e-15 87.0 111 49.5
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 2.6e-15 86.7 116 46.6
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 7.4e-15 85.1 111 48.6
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 7.4e-15 85.1 111 48.6
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 9.7e-15 84.7 108 48.1
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 9.7e-15 84.7 101 47.5
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.3e-14 84.3 105 50.5
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 3.7e-14 82.8 112 47.3
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 8.2e-14 81.6 115 47.0
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 1.4e-13 80.9 115 44.3
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 1.8e-13 80.5 100 48.0
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 2.4e-13 80.1 115 46.1
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.1e-13 79.7 111 45.9
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 3.1e-13 79.7 118 45.8
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 9.1e-13 78.2 116 43.1
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 9.1e-13 78.2 104 45.2
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 2.0e-12 77.0 114 44.7
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 3.5e-12 76.3 103 45.6
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 3.5e-12 76.3 113 43.4
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 4.5e-12 75.9 121 43.8
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 4.5e-12 75.9 112 45.5
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 5.9e-12 75.5 112 45.5
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 1.3e-11 74.3 114 42.1
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 1.3e-11 74.3 118 40.7
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.2e-11 73.6 108 39.8
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 2.2e-11 73.6 102 39.2
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 3.8e-11 72.8 113 43.4
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 5.0e-11 72.4 95 38.9
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 6.5e-11 72.0 117 43.6
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 8.5e-11 71.6 116 43.1
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 1.9e-10 70.5 116 41.4
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 1.9e-10 70.5 115 41.7
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 1.9e-10 70.5 96 43.8
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 5.5e-10 68.9 114 41.2
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 5.5e-10 68.9 110 35.5
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 7.2e-10 68.6 116 42.2
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 9.4e-10 68.2 113 38.9
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 1.2e-09 67.8 111 38.7
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 1.2e-09 67.8 116 40.5
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 2.1e-09 67.0 61 59.0
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 2.7e-09 66.6 116 39.7
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 2.7e-09 66.6 61 62.3
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 3.6e-09 66.2 115 40.0
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 3.6e-09 66.2 110 41.8
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 4.7e-09 65.9 63 54.0
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 6.1e-09 65.5 64 56.2
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 6.1e-09 65.5 109 38.5
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 8.0e-09 65.1 115 37.4
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 8.0e-09 65.1 115 41.7
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 8.0e-09 65.1 90 47.8
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.0e-08 64.7 116 40.5
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 1.0e-08 64.7 118 43.2
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 1.4e-08 64.3 114 42.1
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 1.8e-08 63.9 64 57.8
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 1.8e-08 63.9 84 47.6
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 1.8e-08 63.9 61 55.7
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 2.3e-08 63.5 114 39.5
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 2.3e-08 63.5 113 38.1
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 3.0e-08 63.2 64 56.2
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 4.0e-08 62.8 68 50.0
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 4.0e-08 62.8 111 37.8
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 6.7e-08 62.0 82 46.3
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 6.7e-08 62.0 111 39.6
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 8.8e-08 61.6 63 57.1
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 1.1e-07 61.2 103 37.9
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 1.1e-07 61.2 114 36.8
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 1.5e-07 60.8 62 54.8
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 2.0e-07 60.5 63 54.0
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 2.0e-07 60.5 118 35.6
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 4.4e-07 59.3 61 55.7
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 4.4e-07 59.3 61 55.7
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 2.2e-06 57.0 61 54.1
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.2e-06 57.0 61 54.1
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.8e-06 56.6 111 38.7
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.7e-06 56.2 54 53.7
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 4.8e-06 55.8 61 52.5
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 6.3e-06 55.5 90 34.4
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 6.3e-06 55.5 116 38.8


User provided reference genes

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