Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g124320 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.2e-35 151.8 77 100.0
Ah.01g009770 Amaranthus hybridus HOM05D000002 ORTHO05D000047 6.2e-30 133.7 76 82.9
Ah.08g217270 Amaranthus hybridus HOM05D000002 ORTHO05D000047 3.8e-27 124.4 76 78.9
Ah.16g108640 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.8e-24 115.5 76 76.3
Ah.08g217210 Amaranthus hybridus HOM05D000002 ORTHO05D000001 3.0e-24 114.8 75 73.3
Ah.08g216690 Amaranthus hybridus HOM05D000002 ORTHO05D000047 7.4e-23 110.2 75 72.0
Ah.09g230280 Amaranthus hybridus HOM05D000002 ORTHO05D000047 7.4e-23 110.2 76 71.1
Ah.02g115850 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.3e-22 109.4 76 68.4
Ah.03g140660 Amaranthus hybridus HOM05D000002 ORTHO05D000047 6.3e-22 107.1 76 67.1
Ah.11g043810 Amaranthus hybridus HOM05D000002 ORTHO05D000047 6.3e-22 107.1 76 67.1
Ah.03g138700 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.1e-21 106.3 76 67.1
Ah.08g221390 Amaranthus hybridus HOM05D000002 ORTHO05D000047 4.1e-21 104.4 76 64.5
AUR62037749 Chenopodium quinoa HOM05D000002 ORTHO05D000047 4.1e-21 104.4 76 63.2
Ah.09g226530 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.2e-20 102.8 75 68.0
Ah.03g145780 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.7e-19 99.0 76 60.5
Ah.11g041190 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.2e-19 98.6 75 64.0
AUR62041521 Chenopodium quinoa HOM05D000002 ORTHO05D000047 3.8e-19 97.8 76 59.2
AUR62043299 Chenopodium quinoa HOM05D000002 ORTHO05D000047 3.8e-19 97.8 76 59.2
Ah.07g196710 Amaranthus hybridus HOM05D000002 ORTHO05D000047 8.5e-19 96.7 76 61.8
AUR62016548 Chenopodium quinoa HOM05D000002 ORTHO05D000047 8.5e-19 96.7 76 59.2
AUR62020303 Chenopodium quinoa HOM05D000002 ORTHO05D000047 8.5e-19 96.7 76 59.2
Ah.03g140010 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.4e-18 95.9 72 66.7
AUR62012255 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.4e-18 95.9 76 61.8
AUR62030372 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.4e-18 95.9 77 59.7
AUR62019736 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.9e-18 95.5 76 60.5
AUR62027904 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.9e-18 95.5 76 57.9
AUR62035711 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.9e-18 95.5 76 59.2
AUR62027612 Chenopodium quinoa HOM05D000002 ORTHO05D000047 5.5e-18 94.0 76 59.2
Ah.14g082800 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.1e-17 92.0 76 56.6
Ah.02g118140 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.7e-17 91.7 60 78.3
AUR62028809 Chenopodium quinoa HOM05D000002 ORTHO05D000001 4.6e-17 90.9 76 59.2
ECA234G1548 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-17 90.9 76 60.5
AUR62035497 Chenopodium quinoa HOM05D000002 ORTHO05D000047 6.1e-17 90.5 76 55.3
Ah.15g093520 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.3e-16 89.4 76 55.3
AUR62017687 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.3e-16 88.6 77 59.7
AUR62036366 Chenopodium quinoa HOM05D000002 ORTHO05D000047 6.7e-16 87.0 76 52.6
Ah.04g154970 Amaranthus hybridus HOM05D000002 ORTHO05D000001 8.7e-16 86.7 76 57.9
AUR62016303 Chenopodium quinoa HOM05D000002 ORTHO05D000001 8.7e-16 86.7 76 51.3
AUR62040558 Chenopodium quinoa HOM05D000002 ORTHO05D000047 8.7e-16 86.7 76 53.9
AUR62002676 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.5e-15 85.9 75 57.3
Ah.02g120440 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.9e-15 85.5 76 55.3
Ah.07g199380 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.9e-15 85.5 76 56.6
Ah.13g070650 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.9e-15 85.5 76 55.3
AUR62038768 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.9e-15 85.5 76 55.3
Ah.16g105390 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.5e-15 85.1 75 56.0
AUR62016451 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.5e-15 85.1 77 54.5
AUR62033917 Chenopodium quinoa HOM05D000002 ORTHO05D000047 4.3e-15 84.3 76 47.4
Ah.10g035860 Amaranthus hybridus HOM05D000002 ORTHO05D000047 9.7e-15 83.2 76 50.0
AUR62031594 Chenopodium quinoa HOM05D003659 ORTHO05D004298 1.3e-14 82.8 76 53.9
AUR62009741 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.6e-14 82.4 76 51.3
AUR62013402 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.6e-14 82.4 67 56.7
AUR62040344 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.6e-14 82.4 76 53.9
Ah.06g190070 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.2e-14 82.0 76 55.3
AUR62040110 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.2e-14 82.0 71 52.1
AUR62008360 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.8e-14 81.6 76 53.9
AUR62014608 Chenopodium quinoa HOM05D000022 ORTHO05D000047 3.7e-14 81.3 73 52.1
Ah.01g008330 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.1e-13 79.7 76 51.3
Ah.09g228960 Amaranthus hybridus HOM05D000002 ORTHO05D000047 5.3e-13 77.4 72 52.8
AUR62002721 Chenopodium quinoa HOM05D000945 ORTHO05D000919 6.9e-13 77.0 76 53.9
AUR62019977 Chenopodium quinoa HOM05D000002 ORTHO05D000047 6.9e-13 77.0 76 51.3
AUR62036112 Chenopodium quinoa HOM05D000002 ORTHO05D000047 9.1e-13 76.6 65 50.8
Ah.10g033980 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.2e-12 76.3 53 64.2
Ah.04g159430 Amaranthus hybridus HOM05D000002 ORTHO05D000047 3.4e-12 74.7 69 52.2
Ah.04g154620 Amaranthus hybridus HOM05D000002 ORTHO05D000047 4.5e-12 74.3 73 52.1
AUR62023719 Chenopodium quinoa HOM05D000002 ORTHO05D000047 3.8e-11 71.2 48 68.8
AUR62039356 Chenopodium quinoa HOM05D000002 ORTHO05D000047 3.8e-11 71.2 76 48.7
AUR62042390 Chenopodium quinoa HOM05D000002 ORTHO05D000047 3.8e-11 71.2 76 48.7
Ah.03g140180 Amaranthus hybridus HOM05D000002 ORTHO05D000047 6.5e-11 70.5 48 66.7
AUR62017512 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.4e-10 69.3 76 46.1
Ah.11g043090 Amaranthus hybridus HOM05D000002 ORTHO05D000047 1.9e-10 68.9 56 53.6
AUR62002827 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.9e-10 68.9 61 57.4
Ah.13g069800 Amaranthus hybridus HOM05D000002 ORTHO05D000001 4.2e-10 67.8 48 66.7
AUR62004885 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.6e-09 65.9 48 66.7
Ah.11g041540 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.1e-09 65.5 49 61.2
AUR62017382 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.8e-08 62.4 44 65.9
Ah.08g223040 Amaranthus hybridus HOM05D000002 ORTHO05D014350 3.0e-08 61.6 56 50.0
TPR.G33357 Trifolium pratense HOM05D000002 ORTHO05D000047 1.1e-07 59.7 76 42.1
Hma1.2p1_1936F.1_g308230 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-07 58.2 75 41.3
AUR62033430 Chenopodium quinoa HOM05D000002 ORTHO05D000047 5.7e-07 57.4 37 67.6
Ah.09g230030 Amaranthus hybridus HOM05D000002 ORTHO05D000047 9.7e-07 56.6 76 42.1
AUR62009943 Chenopodium quinoa HOM05D000002 ORTHO05D000047 9.7e-07 56.6 76 39.5
AUR62024540 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.3e-06 56.2 37 70.3
Ah.05g179170 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.2e-06 55.5 50 48.0
CAN.G1278.1 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-06 55.1 76 39.5
Hma1.2p1_2308F.1_g319490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.7e-06 54.7 75 37.3
SHI00431 Sapria himalayana HOM05D000002 ORTHO05D000047 3.7e-06 54.7 75 40.0
Ah.08g219750 Amaranthus hybridus HOM05D000002 ORTHO05D000047 4.8e-06 54.3 38 65.8
Hma1.2p1_2420F.1_g321840 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.8e-06 54.3 76 44.7
Thecc.06G106100 Theobroma cacao HOM05D000002 ORTHO05D000047 4.8e-06 54.3 76 36.8
Psat0s1953g0440 Pisum sativum HOM05D000002 ORTHO05D000047 6.3e-06 53.9 76 40.8
SHI23543 Sapria himalayana HOM05D000002 ORTHO05D000047 6.3e-06 53.9 74 36.5
Hma1.2p1_0222F.1_g093830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.2e-06 53.5 74 41.9
Psat4g075880 Pisum sativum HOM05D000002 ORTHO05D000047 8.2e-06 53.5 76 40.8
Sopen07g018350 Solanum pennellii HOM05D000002 ORTHO05D000001 8.2e-06 53.5 75 40.0
Sopen11g020720 Solanum pennellii HOM05D000002 ORTHO05D000001 8.2e-06 53.5 75 40.0


User provided reference genes

Program Settings