Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia10913 Actinidia chinensis HOM05D004820 ORTHO05D005946 6.6e-60 234.2 149 100.0
Actinidia00769 Actinidia chinensis HOM05D004820 ORTHO05D005946 1.6e-10 70.1 38 94.7
CSS0006431 Camellia sinensis var. sinensis HOM05D004820 ORTHO05D005946 3.7e-10 68.9 38 92.1
Dinv32923 Davidia involucrata HOM05D004820 ORTHO05D005946 1.8e-09 66.6 38 86.8
SGA_v2.0_scaffold81G26015 Striga asiatica HOM05D004820 ORTHO05D005946 3.1e-09 65.9 38 84.2
Cc03_g10020 Coffea canephora HOM05D004820 ORTHO05D005946 5.3e-09 65.1 91 74.7
Oeu028072.3 Olea europaea HOM05D004820 ORTHO05D005946 9.0e-09 64.3 37 83.8
Oeu041704.1 Olea europaea HOM05D004820 ORTHO05D005946 1.2e-08 63.9 38 81.6
MSTRG.17449 Avicennia marina HOM05D004820 ORTHO05D005946 1.5e-08 63.5 38 81.6
TAR362G1079 Trochodendron aralioides HOM05D004820 ORTHO05D005946 2.0e-08 63.2 93 53.8
Sopen09g027030 Solanum pennellii HOM05D004820 ORTHO05D005946 4.5e-08 62.0 94 70.2
PGSC0003DMG400019362 Solanum tuberosum HOM05D004820 ORTHO05D005946 4.5e-08 62.0 94 66.0
Migut.N02046 Erythranthe guttata HOM05D004820 ORTHO05D005946 9.9e-08 60.8 38 76.3
Glyma.03G155000 Glycine max HOM05D004820 ORTHO05D005946 9.9e-08 60.8 38 76.3
Lsat_1_v5_gn_5_187781 Lactuca sativa HOM05D004820 ORTHO05D005946 9.9e-08 60.8 96 67.7
Solyc09g065280.4 Solanum lycopersicum HOM05D004820 ORTHO05D005946 9.9e-08 60.8 94 47.9
vmacro14915 Vaccinium macrocarpon HOM05D004820 ORTHO05D005946 1.3e-07 60.5 38 81.6
PSO210G1690 Papaver somniferum HOM05D004820 ORTHO05D005946 1.7e-07 60.1 38 73.7
Sc05g0005630 Simmondsia chinensis HOM05D004820 ORTHO05D005946 1.7e-07 60.1 38 73.7
Glyma.19G157200 Glycine max HOM05D004820 ORTHO05D005946 2.2e-07 59.7 38 73.7
Potri.005G210600 Populus trichocarpa HOM05D004820 ORTHO05D005946 2.2e-07 59.7 38 73.7
PGR044G0684 Punica granatum HOM05D004820 ORTHO05D005946 2.2e-07 59.7 37 75.7
Sabra05G0160800 Salix brachista HOM05D004820 ORTHO05D005946 2.2e-07 59.7 38 73.7
VMungo1383G2933 Vigna mungo HOM05D004820 ORTHO05D005946 2.2e-07 59.7 38 73.7
Cpa.g.sc52.45 Carica papaya HOM05D004820 ORTHO05D005946 3.8e-07 58.9 38 78.9
TWI14G0518 Tripterygium wilfordii HOM05D004820 ORTHO05D005946 3.8e-07 58.9 38 71.1
Manes.01G206900 Manihot esculenta HOM05D004820 ORTHO05D005946 6.4e-07 58.2 38 73.7
Nn4g26288 Nelumbo nucifera HOM05D004820 ORTHO05D005946 6.4e-07 58.2 38 71.1
THA.LOC104801242 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 6.4e-07 58.2 37 75.7
Aa31LG1G9390 Aethionema arabicum HOM05D004820 ORTHO05D005946 1.1e-06 57.4 38 68.4
CAN.G590.6 Capsicum annuum HOM05D004820 ORTHO05D005946 1.1e-06 57.4 96 40.6
CiPaw.08G106000 Carya illinoinensis HOM05D004820 ORTHO05D005946 1.4e-06 57.0 38 73.7
Gohir.A08G186300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 1.4e-06 57.0 38 71.1
Gohir.D08G204400 Gossypium hirsutum HOM05D004820 ORTHO05D005946 1.4e-06 57.0 38 71.1
Gorai.004G216400 Gossypium raimondii HOM05D004820 ORTHO05D005946 1.4e-06 57.0 38 71.1
Thecc.01G277300 Theobroma cacao HOM05D004820 ORTHO05D005946 1.4e-06 57.0 38 71.1
QL03p020183 Quercus lobata HOM05D004820 ORTHO05D005946 1.9e-06 56.6 38 65.8
QL12p021397 Quercus lobata HOM05D004820 ORTHO05D005946 1.9e-06 56.6 38 65.8
Lj4g0024215 Lotus japonicus HOM05D004820 ORTHO05D005946 2.4e-06 56.2 36 72.2
Lalb_Chr06g0162971 Lupinus albus HOM05D004820 ORTHO05D005946 2.4e-06 56.2 38 68.4
PSO761G0350 Papaver somniferum HOM05D004820 ORTHO05D005946 2.4e-06 56.2 38 71.1
Phvul.005G035400 Phaseolus vulgaris HOM05D004820 ORTHO05D005946 2.4e-06 56.2 38 71.1
THA.LOC104815940 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 2.4e-06 56.2 36 75.0
AL1G12610 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 3.2e-06 55.8 38 65.8
Duzib138G0452 Durio zibethinus HOM05D004820 ORTHO05D005946 3.2e-06 55.8 38 68.4
TPR.G9917 Trifolium pratense HOM05D004820 ORTHO05D005946 3.2e-06 55.8 38 68.4
Ciclev10020348m.g Citrus clementina HOM05D004820 ORTHO05D005946 4.2e-06 55.5 38 68.4
COL.COLO4_09079 Corchorus olitorius HOM05D004820 ORTHO05D005946 4.2e-06 55.5 38 65.8
Gorai.004G079300 Gossypium raimondii HOM05D004820 ORTHO05D005946 4.2e-06 55.5 92 39.1
BcaC07g42265 Brassica carinata HOM05D004820 ORTHO05D005946 5.5e-06 55.1 38 60.5
CANSAT25G3765 Cannabis sativa HOM05D004820 ORTHO05D005946 7.1e-06 54.7 38 68.4
Duzib211G0468 Durio zibethinus HOM05D004820 ORTHO05D005946 7.1e-06 54.7 36 72.2
Medtr7g095000 Medicago truncatula HOM05D004820 ORTHO05D005946 7.1e-06 54.7 35 71.4
Ah.01g024010 Amaranthus hybridus HOM05D004820 ORTHO05D005946 9.3e-06 54.3 36 66.7
Ca_08606_v3 Cicer arietinum L. HOM05D004820 ORTHO05D005946 9.3e-06 54.3 37 67.6
Eucgr.K03365 Eucalyptus grandis HOM05D004820 ORTHO05D005946 9.3e-06 54.3 37 67.6


User provided reference genes

Program Settings