Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G9690 Aethionema arabicum HOM05D000425 ORTHO05D000373 3.7e-45 184.5 93 100.0
Aa31LG2G4210 Aethionema arabicum HOM05D000425 ORTHO05D000373 3.9e-10 68.2 53 75.5
AL5G18810 Arabidopsis lyrata HOM05D000425 ORTHO05D000373 6.6e-10 67.4 53 71.7
AT3G28960 Arabidopsis thaliana HOM05D000425 ORTHO05D000373 6.6e-10 67.4 53 71.7
BolC7t44310H Brassica oleracea HOM05D000425 ORTHO05D000373 1.5e-09 66.2 53 71.7
Sp2g17610 Schrenkiella parvula HOM05D000425 ORTHO05D000373 1.5e-09 66.2 53 73.6
BcaC06g33660 Brassica carinata HOM05D000425 ORTHO05D000373 1.9e-09 65.9 53 71.7
A06p40220 Brassica napus HOM05D000425 ORTHO05D000373 1.9e-09 65.9 53 71.7
C07p37890 Brassica napus HOM05D000425 ORTHO05D000373 1.9e-09 65.9 53 71.7
BraA06t26937Z Brassica rapa HOM05D000425 ORTHO05D000373 1.9e-09 65.9 53 71.7
Thhalv10004328m.g Eutrema salsugineum HOM05D000425 ORTHO05D000373 1.9e-09 65.9 53 71.7
CARHR152040 Cardamine hirsuta HOM05D000425 ORTHO05D000373 2.5e-09 65.5 53 69.8
BcaB07g30103 Brassica carinata HOM05D000425 ORTHO05D000373 7.3e-09 63.9 53 69.8
BcaC03g17541 Brassica carinata HOM05D000425 ORTHO05D000373 7.3e-09 63.9 53 69.8
A02p36230 Brassica napus HOM05D000425 ORTHO05D000373 7.3e-09 63.9 53 69.8
C02p55210 Brassica napus HOM05D000425 ORTHO05D000373 7.3e-09 63.9 53 69.8
BolC2t11569H Brassica oleracea HOM05D000425 ORTHO05D000373 7.3e-09 63.9 53 69.8
BraA02t08623Z Brassica rapa HOM05D000425 ORTHO05D000373 7.3e-09 63.9 53 69.8
Carub.0005s0754 Capsella rubella HOM05D000425 ORTHO05D000373 9.6e-09 63.5 53 67.9
GSVIVG01011401001 Vitis vinifera HOM05D000425 ORTHO05D000373 1.8e-07 59.3 51 66.7
GSVIVG01011406001 Vitis vinifera HOM05D000425 ORTHO05D000373 1.8e-07 59.3 51 66.7
TAR629G1716 Trochodendron aralioides HOM05D000425 ORTHO05D000373 2.4e-07 58.9 51 62.7
GSVIVG01011400001 Vitis vinifera HOM05D000425 ORTHO05D000373 4.0e-07 58.2 70 52.9
AUR62039807 Chenopodium quinoa HOM05D000425 ORTHO05D000373 5.3e-07 57.8 51 62.7
TWI34G1777 Tripterygium wilfordii HOM05D000425 ORTHO05D000373 5.3e-07 57.8 51 60.8
Glyma.09G238000 Glycine max HOM05D000425 ORTHO05D000373 6.9e-07 57.4 49 63.3
AL6G26100 Arabidopsis lyrata HOM05D000425 ORTHO05D000373 9.0e-07 57.0 63 57.1
Prupe.3G157700 Prunus persica HOM05D000425 ORTHO05D000373 9.0e-07 57.0 51 58.8
SalBow2G2309 Salvia bowleyana HOM05D000425 ORTHO05D000373 9.0e-07 57.0 49 61.2
Carub.0006s1342 Capsella rubella HOM05D000425 ORTHO05D000373 1.2e-06 56.6 63 55.6
FAN07G2775 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.2e-06 56.6 49 61.2
Gohir.D04G048800 Gossypium hirsutum HOM05D000425 ORTHO05D000373 1.2e-06 56.6 62 53.2
THA.LOC104822358 Tarenaya hassleriana HOM05D000425 ORTHO05D000373 1.2e-06 56.6 51 60.8
TAR622G0213 Trochodendron aralioides HOM05D000425 ORTHO05D000373 1.2e-06 56.6 49 63.3
GSVIVG01011405001 Vitis vinifera HOM05D000425 ORTHO05D000373 1.2e-06 56.6 51 60.8
Duzib264G0577 Durio zibethinus HOM05D000425 ORTHO05D000373 1.5e-06 56.2 51 62.7
FvH4_4g31320 Fragaria vesca HOM05D000425 ORTHO05D000373 1.5e-06 56.2 49 59.2
FAN12G1136 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.5e-06 56.2 49 59.2
FAN22G1628 Fragaria x ananassa HOM05D000425 ORTHO05D000373 1.5e-06 56.2 49 59.2
Gohir.D09G014700 Gossypium hirsutum HOM05D000425 ORTHO05D000373 1.5e-06 56.2 51 62.7
Gorai.006G016700 Gossypium raimondii HOM05D000425 ORTHO05D000373 1.5e-06 56.2 51 62.7
Aqoxy3G00638 Aquilegia oxysepala HOM05D000425 ORTHO05D000373 2.0e-06 55.8 51 60.8
CiPaw.03G026300 Carya illinoinensis HOM05D000425 ORTHO05D000373 2.0e-06 55.8 51 60.8
Migut.H00926 Erythranthe guttata HOM05D000425 ORTHO05D000373 2.0e-06 55.8 51 60.8
CARHR198070 Cardamine hirsuta HOM05D000425 ORTHO05D000373 2.6e-06 55.5 63 57.1
Ciclev10031712m.g Citrus clementina HOM05D000425 ORTHO05D000373 2.6e-06 55.5 49 61.2
DCAR_021660 Daucus carota HOM05D000425 ORTHO05D000373 2.6e-06 55.5 53 62.3
MD09G1051600 Malus domestica HOM05D000425 ORTHO05D000373 2.6e-06 55.5 51 60.8
Psat3g198200 Pisum sativum HOM05D000425 ORTHO05D000373 2.6e-06 55.5 49 63.3
QL02p082293 Quercus lobata HOM05D000425 ORTHO05D000373 2.6e-06 55.5 51 60.8
TWI79G0964 Tripterygium wilfordii HOM05D000425 ORTHO05D000373 2.6e-06 55.5 49 61.2
Thhalv10013613m.g Eutrema salsugineum HOM05D000425 ORTHO05D000373 3.4e-06 55.1 63 57.1
Sp6g28830 Schrenkiella parvula HOM05D000425 ORTHO05D000373 3.4e-06 55.1 51 60.8
Atru.chr8.167 Acer truncatum HOM05D000425 ORTHO05D000373 4.4e-06 54.7 51 60.8
Actinidia33199 Actinidia chinensis HOM05D000425 ORTHO05D000373 4.4e-06 54.7 49 59.2
ATR0564G256 Amborella trichopoda HOM05D000425 ORTHO05D000373 4.4e-06 54.7 49 59.2
AT5G15240 Arabidopsis thaliana HOM05D000425 ORTHO05D000373 4.4e-06 54.7 51 58.8
MSTRG.23934 Avicennia marina HOM05D000425 ORTHO05D000373 4.4e-06 54.7 51 58.8
BolC2t06695H Brassica oleracea HOM05D000425 ORTHO05D000373 4.4e-06 54.7 51 62.7
CSS0024606 Camellia sinensis var. sinensis HOM05D000425 ORTHO05D000373 4.4e-06 54.7 51 60.8
CSS0025226 Camellia sinensis var. sinensis HOM05D000425 ORTHO05D000373 4.4e-06 54.7 51 60.8
Haze_14525 Corylus avellana HOM05D000425 ORTHO05D000373 4.4e-06 54.7 51 58.8
Duzib147G0721 Durio zibethinus HOM05D000425 ORTHO05D000373 4.4e-06 54.7 51 60.8
Gorai.012G054100 Gossypium raimondii HOM05D000425 ORTHO05D000373 4.4e-06 54.7 62 51.6
MBI02_g08828_MAGBIO Magnolia biondii HOM05D000425 ORTHO05D000373 4.4e-06 54.7 49 61.2
MBI02_g08829_MAGBIO Magnolia biondii HOM05D000425 ORTHO05D000373 4.4e-06 54.7 49 61.2
MD00G1130600 Malus domestica HOM05D000425 ORTHO05D000373 4.4e-06 54.7 51 58.8
MD13G1071800 Malus domestica HOM05D000425 ORTHO05D000373 4.4e-06 54.7 49 55.1
MD16G1072500 Malus domestica HOM05D000425 ORTHO05D000373 4.4e-06 54.7 49 57.1
Manes.05G102800 Manihot esculenta HOM05D000425 ORTHO05D000373 4.4e-06 54.7 49 61.2
Medtr3g465440 Medicago truncatula HOM05D000425 ORTHO05D000373 4.4e-06 54.7 50 58.0
Prupe.1G275100 Prunus persica HOM05D000425 ORTHO05D000373 4.4e-06 54.7 49 57.1
Thecc.04G082500 Theobroma cacao HOM05D000425 ORTHO05D000373 4.4e-06 54.7 51 60.8
TAR629G1258 Trochodendron aralioides HOM05D000425 ORTHO05D000373 4.4e-06 54.7 51 58.8
BcaB08g36914 Brassica carinata HOM05D000425 ORTHO05D000373 5.8e-06 54.3 63 55.6
Ca_06767_v3 Cicer arietinum L. HOM05D000425 ORTHO05D000373 5.8e-06 54.3 49 63.3
Ciclev10011765m.g Citrus clementina HOM05D000425 ORTHO05D000373 5.8e-06 54.3 51 60.8
ECA232G1188 Erigeron canadensis HOM05D000425 ORTHO05D000373 5.8e-06 54.3 70 50.0
FvH4_6g48490 Fragaria vesca HOM05D000425 ORTHO05D000373 5.8e-06 54.3 52 57.7
FvH4_6g48530 Fragaria vesca HOM05D000425 ORTHO05D000373 5.8e-06 54.3 52 57.7
FAN05G2023 Fragaria x ananassa HOM05D000425 ORTHO05D000373 5.8e-06 54.3 52 57.7
FAN09G1027 Fragaria x ananassa HOM05D000425 ORTHO05D000373 5.8e-06 54.3 52 57.7
FAN14G0444 Fragaria x ananassa HOM05D000425 ORTHO05D000373 5.8e-06 54.3 52 57.7
FAN14G3477 Fragaria x ananassa HOM05D000425 ORTHO05D000373 5.8e-06 54.3 52 57.7
Glyma.18G259600 Glycine max HOM05D000425 ORTHO05D000373 5.8e-06 54.3 49 61.2
Oeu035696.1 Olea europaea HOM05D000425 ORTHO05D000373 5.8e-06 54.3 49 63.3
RcHm_v2.0_Chr4g0439811 Rosa chinensis HOM05D000425 ORTHO05D000373 5.8e-06 54.3 49 55.1
EL10Ac9g21282 Beta vulgaris HOM05D000425 ORTHO05D000373 7.6e-06 53.9 53 56.6
BcaC03g13418 Brassica carinata HOM05D000425 ORTHO05D000373 7.6e-06 53.9 51 62.7
C02p07630 Brassica napus HOM05D000425 ORTHO05D000373 7.6e-06 53.9 51 62.7
Ciclev10011828m.g Citrus clementina HOM05D000425 ORTHO05D000373 7.6e-06 53.9 53 56.6
Gohir.A05G366200 Gossypium hirsutum HOM05D000425 ORTHO05D000373 7.6e-06 53.9 51 58.8
Gohir.A09G016000 Gossypium hirsutum HOM05D000425 ORTHO05D000373 7.6e-06 53.9 51 60.8
Hma1.2p1_0409F.1_g146940 Hydrangea macrophylla HOM05D000425 ORTHO05D000373 7.6e-06 53.9 51 56.9
Medtr3g033730 Medicago truncatula HOM05D000425 ORTHO05D000373 7.6e-06 53.9 49 61.2
Medtr7g010750 Medicago truncatula HOM05D000425 ORTHO05D000373 7.6e-06 53.9 49 63.3
Medtr7g010790 Medicago truncatula HOM05D000425 ORTHO05D000373 7.6e-06 53.9 49 63.3
Oeu011857.1 Olea europaea HOM05D000425 ORTHO05D000373 7.6e-06 53.9 51 58.8
Prupe.3G267100 Prunus persica HOM05D000425 ORTHO05D000373 7.6e-06 53.9 51 58.8
QL03p063860 Quercus lobata HOM05D000425 ORTHO05D000373 7.6e-06 53.9 49 61.2
Rhsim10G0038900 Rhododendron simsii HOM05D000425 ORTHO05D000373 7.6e-06 53.9 51 56.9
RcHm_v2.0_Chr2g0168381 Rosa chinensis HOM05D000425 ORTHO05D000373 7.6e-06 53.9 49 61.2
RcHm_v2.0_Chr3g0466871 Rosa chinensis HOM05D002440 ORTHO05D002576 7.6e-06 53.9 49 61.2
SalBow1G0385 Salvia bowleyana HOM05D000425 ORTHO05D000373 7.6e-06 53.9 51 56.9
SalBow1G7723 Salvia bowleyana HOM05D000425 ORTHO05D000373 7.6e-06 53.9 51 56.9
TPR.G33564 Trifolium pratense HOM05D000425 ORTHO05D000373 7.6e-06 53.9 49 61.2
Actinidia06096 Actinidia chinensis HOM05D000425 ORTHO05D000373 9.9e-06 53.5 51 58.8
BcaNung03318 Brassica carinata HOM05D000425 ORTHO05D000373 9.9e-06 53.5 51 60.8
Cc05_g04760 Coffea canephora HOM05D000425 ORTHO05D000373 9.9e-06 53.5 51 60.8
COL.COLO4_04924 Corchorus olitorius HOM05D000425 ORTHO05D000373 9.9e-06 53.5 51 58.8
Dinv16651 Davidia involucrata HOM05D000425 ORTHO05D000373 9.9e-06 53.5 69 50.7
Dinv33762 Davidia involucrata HOM05D000425 ORTHO05D000373 9.9e-06 53.5 51 58.8
Eucgr.J01346 Eucalyptus grandis HOM05D000425 ORTHO05D000373 9.9e-06 53.5 51 56.9
Gohir.A11G069500 Gossypium hirsutum HOM05D000425 ORTHO05D000373 9.9e-06 53.5 51 58.8
Gohir.D11G073500 Gossypium hirsutum HOM05D000425 ORTHO05D000373 9.9e-06 53.5 51 58.8
Gorai.007G078900 Gossypium raimondii HOM05D000425 ORTHO05D000373 9.9e-06 53.5 51 58.8
Lju41A16T45 Lonicera japonica HOM05D000425 ORTHO05D000373 9.9e-06 53.5 53 60.4
Phvul.008G040700 Phaseolus vulgaris HOM05D000425 ORTHO05D000373 9.9e-06 53.5 49 59.2
Prupe.3G152900 Prunus persica HOM05D000425 ORTHO05D000373 9.9e-06 53.5 68 47.1
SGA_v2.0_scaffold499G52484 Striga asiatica HOM05D000425 ORTHO05D000373 9.9e-06 53.5 51 58.8


User provided reference genes

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