Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G4620 Aethionema arabicum HOM05D000901 ORTHO05D004766 1.7e-134 482.6 242 100.0
AL1G33070 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 1.2e-98 363.6 242 72.3
AT1G20225 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 9.9e-98 360.5 242 71.9
CARHR020720 Cardamine hirsuta HOM05D000901 ORTHO05D004766 9.9e-98 360.5 242 71.9
Carub.0001s1975 Capsella rubella HOM05D000901 ORTHO05D004766 2.2e-97 359.4 242 72.7
C05p18770 Brassica napus HOM05D000901 ORTHO05D004766 2.9e-97 359.0 242 71.5
BolC5t30582H Brassica oleracea HOM05D000901 ORTHO05D004766 3.2e-96 355.5 242 70.7
BraA06t24738Z Brassica rapa HOM05D000901 ORTHO05D004766 3.5e-95 352.1 242 70.2
A06p16340 Brassica napus HOM05D000901 ORTHO05D004766 6.0e-95 351.3 243 70.8
Sp1g17990 Schrenkiella parvula HOM05D000901 ORTHO05D004766 1.7e-94 349.7 242 70.2
BcaB07g32030 Brassica carinata HOM05D000901 ORTHO05D004766 4.0e-91 338.6 230 70.9
THA.LOC104813773 Tarenaya hassleriana HOM05D000901 ORTHO05D004766 1.3e-89 333.6 239 70.3
BcaC05g25925 Brassica carinata HOM05D000901 ORTHO05D004766 4.2e-88 328.6 221 71.5
Sp5g31130 Schrenkiella parvula HOM05D000901 ORTHO05D004766 8.7e-86 320.9 236 66.1
Thhalv10019591m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 4.3e-85 318.5 222 69.8
BcaC03g15640 Brassica carinata HOM05D000901 ORTHO05D004766 3.6e-84 315.5 235 66.4
BolC2t09354H Brassica oleracea HOM05D000901 ORTHO05D004766 7.6e-82 307.8 230 66.5
AT1G76020 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 1.3e-81 307.0 236 64.0
C02p33510 Brassica napus HOM05D000901 ORTHO05D004766 8.4e-81 304.3 230 65.7
BraA02t07071Z Brassica rapa HOM05D000901 ORTHO05D004766 1.4e-80 303.5 222 67.6
A02p20390 Brassica napus HOM05D000901 ORTHO05D004766 1.9e-80 303.1 222 67.6
Aa31LG4G6150 Aethionema arabicum HOM05D000901 ORTHO05D004766 2.7e-79 299.3 227 65.6
BolC6t40030H Brassica oleracea HOM05D000901 ORTHO05D004766 7.3e-77 291.2 237 61.6
A07p41510 Brassica napus HOM05D000901 ORTHO05D004766 1.3e-76 290.4 228 64.0
Carub.0002s2290 Capsella rubella HOM05D000901 ORTHO05D004766 1.3e-76 290.4 231 62.8
BcaC08g47306 Brassica carinata HOM05D000901 ORTHO05D004766 2.8e-76 289.3 228 63.2
BcaC08g47307 Brassica carinata HOM05D000901 ORTHO05D004766 2.8e-76 289.3 228 63.2
C06p49920 Brassica napus HOM05D000901 ORTHO05D004766 3.6e-76 288.9 228 63.2
BcaC08g47093 Brassica carinata HOM05D000901 ORTHO05D004766 4.0e-75 285.4 227 62.1
BraA07t31683Z Brassica rapa HOM05D000901 ORTHO05D004766 1.7e-73 280.0 238 59.2
AL2G36040 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 2.2e-73 279.6 267 55.4
CARHR069550 Cardamine hirsuta HOM05D000901 ORTHO05D004766 1.6e-71 273.5 223 62.8
Thhalv10010046m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 1.3e-68 263.8 172 72.7
Thecc.08G049900 Theobroma cacao HOM05D000901 ORTHO05D004766 2.5e-61 239.6 226 53.5
FAN20G3106 Fragaria x ananassa HOM05D000901 ORTHO05D004766 2.8e-60 236.1 221 54.8
Gorai.010G001700 Gossypium raimondii HOM05D000901 ORTHO05D004766 4.8e-60 235.3 216 54.2
Manes.05G143600 Manihot esculenta HOM05D000901 ORTHO05D004766 1.4e-59 233.8 227 51.5
Potri.005G244400 Populus trichocarpa HOM05D000901 ORTHO05D004766 1.4e-59 233.8 210 54.3
COL.COLO4_26098 Corchorus olitorius HOM05D000901 ORTHO05D004766 1.8e-59 233.4 210 54.3
Sabra05G0189000 Salix brachista HOM05D000901 ORTHO05D004766 5.3e-59 231.9 222 53.6
Prupe.1G360400 Prunus persica HOM05D000901 ORTHO05D004766 1.5e-58 230.3 236 51.3
FvH4_2g38030 Fragaria vesca HOM05D000901 ORTHO05D004766 2.6e-58 229.6 234 51.7
Glyma.04G021300 Glycine max HOM05D000901 ORTHO05D004766 3.4e-58 229.2 231 49.8
Medtr0332s0020 Medicago truncatula HOM05D000901 ORTHO05D004766 3.4e-58 229.2 231 48.1
RcHm_v2.0_Chr6g0303571 Rosa chinensis HOM05D000901 ORTHO05D004766 3.4e-58 229.2 234 51.3
Thecc.08G050000 Theobroma cacao HOM05D000901 ORTHO05D004766 3.4e-58 229.2 217 54.4
Cpa.g.sc26.277 Carica papaya HOM05D000901 ORTHO05D004766 1.0e-57 227.6 231 49.8
Eucgr.F03719 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.3e-57 227.3 219 52.5
Cfa013996 Carpinus fangiana HOM05D000901 ORTHO05D004766 1.7e-57 226.9 228 51.3
arahy.Tifrunner.gnm1.ann1.774XMB Arachis hypogaea HOM05D000901 ORTHO05D004766 2.2e-57 226.5 236 47.9
arahy.Tifrunner.gnm1.ann1.K685T3 Arachis hypogaea HOM05D000901 ORTHO05D004766 2.9e-57 226.1 236 47.9
Phvul.009G019200 Phaseolus vulgaris HOM05D000901 ORTHO05D004766 5.0e-57 225.3 235 48.5
PGR031G2145 Punica granatum HOM05D000901 ORTHO05D004766 5.0e-57 225.3 223 52.5
Duzib041G0373 Durio zibethinus HOM05D000901 ORTHO05D004766 1.1e-56 224.2 231 50.2
MD08G1008700 Malus domestica HOM05D000901 ORTHO05D004766 1.9e-56 223.4 220 53.2
Lj1g0003310 Lotus japonicus HOM05D000901 ORTHO05D004766 2.5e-56 223.0 221 48.9
VMungo1309G2869 Vigna mungo HOM05D002716 ORTHO05D003324 2.5e-56 223.0 237 48.9
CiPaw.07G144500 Carya illinoinensis HOM05D000901 ORTHO05D004766 3.2e-56 222.6 225 52.0
MD15G1007500 Malus domestica HOM05D000901 ORTHO05D004766 5.5e-56 221.9 215 52.1
Hund05158 Selenicereus undatus HOM05D000901 ORTHO05D004766 5.5e-56 221.9 203 54.7
Hund05161 Selenicereus undatus HOM05D000901 ORTHO05D004766 5.5e-56 221.9 203 54.7
AUR62036698 Chenopodium quinoa HOM05D000901 ORTHO05D004766 7.2e-56 221.5 210 52.4
Ciclev10002332m.g Citrus clementina HOM05D000901 ORTHO05D004766 9.3e-56 221.1 221 51.1
CANSAT25G0446 Cannabis sativa HOM05D000901 ORTHO05D004766 1.2e-55 220.7 231 51.9
Hund05157 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.2e-55 220.7 203 53.7
Hund05162 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.2e-55 220.7 203 53.7
ClCG08G014120 Citrullus lanatus HOM05D000901 ORTHO05D004766 1.6e-55 220.3 206 53.4
Glyma.04G021400 Glycine max HOM05D000901 ORTHO05D004766 1.6e-55 220.3 225 49.3
TWI56G0802 Tripterygium wilfordii HOM05D000901 ORTHO05D004766 1.6e-55 220.3 217 52.1
TAR381G0201 Trochodendron aralioides HOM05D000901 ORTHO05D004766 2.1e-55 219.9 232 48.3
EL10Ac1g02116 Beta vulgaris HOM05D000901 ORTHO05D004766 3.5e-55 219.2 210 50.0
TPR.G9568 Trifolium pratense HOM05D000901 ORTHO05D004766 7.9e-55 218.0 219 49.8
PSO063G0231 Papaver somniferum HOM05D000901 ORTHO05D004766 1.0e-54 217.6 220 50.9
Oeu048721.1 Olea europaea HOM05D000901 ORTHO05D004766 2.3e-54 216.5 224 48.7
Nitab4.5_0001936g0050 Nicotiana tabacum HOM05D000901 ORTHO05D004766 3.0e-54 216.1 227 47.6
PGSC0003DMG400029329 Solanum tuberosum HOM05D000901 ORTHO05D004766 3.0e-54 216.1 208 48.6
Ca_11598_v3 Cicer arietinum L. HOM05D000901 ORTHO05D004766 5.1e-54 215.3 216 49.5
Potri.002G017500 Populus trichocarpa HOM05D000901 ORTHO05D004766 8.7e-54 214.5 202 54.5
Aqoxy5G01833 Aquilegia oxysepala HOM05D000901 ORTHO05D004766 1.5e-53 213.8 223 50.2
SGA_v2.0_scaffold145G36086 Striga asiatica HOM05D000901 ORTHO05D004766 1.5e-53 213.8 215 51.2
Eucgr.F01691 Eucalyptus grandis HOM05D000901 ORTHO05D004766 2.5e-53 213.0 220 50.5
MELO3C011351.2 Cucumis melo HOM05D000901 ORTHO05D004766 3.3e-53 212.6 215 50.7
Gohir.A06G001500 Gossypium hirsutum HOM05D000901 ORTHO05D004766 4.3e-53 212.2 181 56.9
Lalb_Chr11g0061781 Lupinus albus HOM05D000901 ORTHO05D004766 4.3e-53 212.2 237 45.6
CSS0047191 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 7.4e-53 211.5 220 50.5
CSS0049889 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 7.4e-53 211.5 224 49.6
HanXRQChr06g0184521 Helianthus annuus HOM05D000901 ORTHO05D004766 7.4e-53 211.5 223 49.3
Nitab4.5_0002730g0020 Nicotiana tabacum HOM05D000901 ORTHO05D004766 7.4e-53 211.5 236 45.8
PSO782G4846 Papaver somniferum HOM05D000901 ORTHO05D004766 7.4e-53 211.5 205 52.2
Lj4A800T39 Lonicera japonica HOM05D000901 ORTHO05D004766 9.7e-53 211.1 232 48.7
Nitab4.5_0000498g0060 Nicotiana tabacum HOM05D000901 ORTHO05D004766 9.7e-53 211.1 218 48.6
Sopen12g031260 Solanum pennellii HOM05D000901 ORTHO05D004766 1.3e-52 210.7 222 47.3
CsaV3_2G024310 Cucumis sativus L. HOM05D000901 ORTHO05D004766 2.2e-52 209.9 224 49.1
Sed0006708 Sechium edule HOM05D000901 ORTHO05D004766 2.2e-52 209.9 224 48.7
Peaxi162Scf00064g00828 Petunia axillaris HOM05D000901 ORTHO05D004766 3.7e-52 209.1 216 48.1
Solyc12g094380.2 Solanum lycopersicum HOM05D000901 ORTHO05D004766 4.8e-52 208.8 222 46.8
QL02p012636 Quercus lobata HOM05D000901 ORTHO05D004766 6.3e-52 208.4 239 46.0
vmacro21856 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 2.4e-51 206.5 220 48.6
CAN.G1517.1 Capsicum annuum HOM05D000901 ORTHO05D004766 4.1e-51 205.7 218 47.2
Hund01706 Selenicereus undatus HOM05D000901 ORTHO05D004766 4.1e-51 205.7 228 48.2
Sc15g0004710 Simmondsia chinensis HOM05D000901 ORTHO05D004766 1.5e-50 203.8 209 48.8
vmacro04376 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 3.4e-50 202.6 222 46.8
AUR62013896 Chenopodium quinoa HOM05D000901 ORTHO05D004766 5.9e-50 201.8 210 48.1
MBI05_g36763_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 5.9e-50 201.8 209 48.3
Migut.C00891 Erythranthe guttata HOM05D000901 ORTHO05D004766 7.7e-50 201.4 220 46.8
MSTRG.1155 Avicennia marina HOM05D000901 ORTHO05D004766 1.0e-49 201.1 202 50.5
DCAR_013891 Daucus carota HOM05D000901 ORTHO05D004766 1.0e-49 201.1 220 49.1
Actinidia37946 Actinidia chinensis HOM05D000901 ORTHO05D004766 1.7e-49 200.3 236 44.1
CSS0010771 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 1.7e-49 200.3 212 47.2
Psat7g082200 Pisum sativum HOM05D000901 ORTHO05D004766 1.7e-49 200.3 200 49.5
Sopen12g031250 Solanum pennellii HOM05D000901 ORTHO05D004766 2.2e-49 199.9 211 46.0
Ah.00g000720 Amaranthus hybridus HOM05D000901 ORTHO05D004766 2.9e-49 199.5 223 47.1
MSTRG.1154 Avicennia marina HOM05D000901 ORTHO05D004766 2.9e-49 199.5 202 51.0
HanXRQChr14g0429411 Helianthus annuus HOM05D000901 ORTHO05D004766 5.0e-49 198.7 222 47.3
ECA238G3494 Erigeron canadensis HOM05D000901 ORTHO05D004766 8.5e-49 198.0 233 45.5
Lsat_1_v5_gn_2_7381 Lactuca sativa HOM05D000901 ORTHO05D004766 1.9e-48 196.8 220 46.8
Nn6g31933 Nelumbo nucifera HOM05D000901 ORTHO05D004766 1.9e-48 196.8 224 46.0
GSVIVG01008758001 Vitis vinifera HOM05D000901 ORTHO05D004766 4.2e-48 195.7 221 48.4
Peaxi162Scf00289g00084 Petunia axillaris HOM05D000901 ORTHO05D004766 2.1e-47 193.4 205 46.8
SalBow7G4280 Salvia bowleyana HOM05D000901 ORTHO05D004766 3.6e-47 192.6 206 46.6
Nn5g30828 Nelumbo nucifera HOM05D000901 ORTHO05D004766 7.9e-47 191.4 222 43.7
PGR083G1908 Punica granatum HOM05D000901 ORTHO05D004766 1.8e-46 190.3 225 45.3
Cc10_g01220 Coffea canephora HOM05D000901 ORTHO05D004766 2.3e-46 189.9 219 45.7
DCAR_025124 Daucus carota HOM05D000901 ORTHO05D004766 3.0e-46 189.5 232 44.4
FAN27G1122 Fragaria x ananassa HOM05D000901 ORTHO05D001160 2.0e-45 186.8 173 53.8
Lj4A18T108 Lonicera japonica HOM05D000901 ORTHO05D004766 2.0e-45 186.8 217 45.2
unitig_32.g11240 Utricularia gibba HOM05D000901 ORTHO05D004766 2.5e-45 186.4 219 43.8
ATR0661G262 Amborella trichopoda HOM05D000901 ORTHO05D004766 7.4e-45 184.9 215 43.7
DCAR_013892 Daucus carota HOM05D000901 ORTHO05D004766 2.8e-44 183.0 217 44.7
Os04g0227500 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 7.7e-42 174.9 227 41.4
BolC1t01801H Brassica oleracea HOM05D000901 ORTHO05D004766 1.7e-41 173.7 115 68.7
Zm00001eb103900 Zea mays HOM05D000901 ORTHO05D004766 2.2e-41 173.3 212 43.4
HPP92_025437 Vanilla planifolia HOM05D000901 ORTHO05D004766 8.5e-41 171.4 222 43.7
Os09g0542200 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 3.2e-40 169.5 206 42.2
CDE09G0289 Ceratophyllum demersum HOM05D000901 ORTHO05D004766 5.5e-40 168.7 225 40.0
Rhsim06G0013400 Rhododendron simsii HOM05D000901 ORTHO05D004766 1.6e-39 167.2 184 49.5
HPP92_026881 Vanilla planifolia HOM05D000901 ORTHO05D004766 2.1e-39 166.8 194 42.3
HPP92_022203 Vanilla planifolia HOM05D000901 ORTHO05D004766 3.6e-39 166.0 228 38.2
HPP92_003483 Vanilla planifolia HOM05D000901 ORTHO05D004766 1.1e-37 161.0 194 40.7
C03p50790 Brassica napus HOM05D000901 ORTHO05D004766 6.3e-36 155.2 117 67.5
SEGI_34166 Sequoiadendron giganteum HOM05D000901 ORTHO05D004766 6.3e-36 155.2 224 37.9
BcaC01g02788 Brassica carinata HOM05D000901 ORTHO05D004766 8.2e-36 154.8 117 67.5
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 1.0e-33 147.9 122 63.1
BolC6t40031H Brassica oleracea HOM05D000901 ORTHO05D004766 1.3e-33 147.5 137 56.2
BcaC09g50963 Brassica carinata HOM05D000901 ORTHO05D004766 8.5e-33 144.8 91 69.2
C07p15020 Brassica napus HOM05D000901 ORTHO05D004766 8.5e-33 144.8 108 68.5
SGA_v2.0_scaffold292G47381 Striga asiatica HOM05D000901 ORTHO05D004766 1.2e-31 141.0 180 41.1
Nitab4.5_0010135g0010 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.6e-31 140.6 218 38.5
SMO137G0357 Selaginella moellendorffii HOM05D000901 ORTHO05D004766 3.6e-31 139.4 218 36.2
MBI05_g19938_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 8.0e-31 138.3 114 58.8
Rhsim07G0249300 Rhododendron simsii HOM05D000901 ORTHO05D004766 4.0e-30 136.0 232 38.8
FAN15G2950 Fragaria x ananassa HOM05D000901 ORTHO05D001160 5.2e-30 135.6 173 45.7
Dinv31885 Davidia involucrata HOM05D000901 ORTHO05D001160 4.4e-29 132.5 136 48.5
Psat7g082240 Pisum sativum HOM05D000901 ORTHO05D004766 5.7e-29 132.1 140 46.4
MBI05_g08641_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 3.7e-28 129.4 152 43.4
BolC6t37476H Brassica oleracea HOM05D000901 ORTHO05D004766 7.0e-27 125.2 97 66.0
Mapoly0103s0033 Marchantia polymorpha HOM05D000901 ORTHO05D004766 1.2e-26 124.4 205 36.1
Oeu048720.1 Olea europaea HOM05D000901 ORTHO05D004766 1.2e-26 124.4 101 57.4
Actinidia29763 Actinidia chinensis HOM05D000901 ORTHO05D004766 5.9e-26 122.1 246 33.7
Pp3c23_11410 Physcomitrium patens HOM05D000901 ORTHO05D004766 7.7e-26 121.7 220 35.0
MBI05_g47803_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 1.7e-25 120.6 149 45.0
Zm00001eb419520 Zea mays HOM05D000901 ORTHO05D004766 5.0e-25 119.0 117 46.2
Eucgr.L01283 Eucalyptus grandis HOM05D000901 ORTHO05D004766 8.5e-25 118.2 118 49.2
C03p60410 Brassica napus HOM05D000901 ORTHO05D004766 1.5e-24 117.5 94 64.9
MSTRG.25272 Avicennia marina HOM05D000901 ORTHO05D004766 1.2e-23 114.4 117 52.1
Lj2g0002110 Lotus japonicus HOM05D000901 ORTHO05D004766 1.3e-20 104.4 153 37.3
BolC3t18302H Brassica oleracea HOM05D000901 ORTHO05D004766 3.7e-20 102.8 84 64.3
Haze_22688 Corylus avellana HOM05D000901 ORTHO05D004766 4.1e-19 99.4 119 46.2
AagrBONN_evm.TU.Sc2ySwM_228.1931 Anthoceros agrestis HOM05D000901 ORTHO05D004766 6.5e-17 92.0 146 34.2
CBR_g10910 Chara braunii HOM05D000901 ORTHO05D004766 1.5e-16 90.9 227 30.4
Ciclev10027478m.g Citrus clementina HOM05D000901 ORTHO05D004766 2.1e-15 87.0 87 48.3
Haze_22689 Corylus avellana HOM05D000901 ORTHO05D004766 1.4e-14 84.3 112 44.6
Rhsim07G0249200 Rhododendron simsii HOM05D000901 ORTHO05D004766 3.0e-14 83.2 91 49.5
BcaC09g50962 Brassica carinata HOM05D000901 ORTHO05D004766 8.8e-14 81.6 72 62.5
Eucgr.H01097 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.5e-13 80.9 67 59.7
CiPaw.07G144400 Carya illinoinensis HOM05D000901 ORTHO05D004766 3.4e-13 79.7 100 41.0
AUR62036699 Chenopodium quinoa HOM05D000901 ORTHO05D004766 6.3e-12 75.5 101 41.6
C03p90670 Brassica napus HOM05D000138 ORTHO05D032089 3.0e-06 56.6 55 54.5


User provided reference genes

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