Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 9.5e-185 650.2 370 100.0
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 1.5e-153 546.6 372 76.6
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 3.3e-153 545.4 371 75.2
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 2.4e-151 539.3 372 75.0
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 2.4e-151 539.3 374 75.9
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 6.5e-149 531.2 371 73.9
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 2.4e-143 512.7 359 74.9
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 2.7e-131 472.6 349 71.6
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 4.6e-131 471.9 342 72.5
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 6.1e-131 471.5 342 72.2
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 3.9e-130 468.8 349 71.1
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 3.3e-129 465.7 370 66.5
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 1.4e-127 460.3 323 73.7
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 2.6e-118 429.5 322 70.2
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 8.0e-115 417.9 374 60.2
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 2.3e-114 416.4 377 60.5
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 2.0e-113 413.3 381 59.8
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 1.4e-111 407.1 370 59.7
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 4.1e-111 405.6 369 61.0
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.0e-109 401.0 370 59.7
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 1.7e-109 400.2 372 59.1
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 2.9e-109 399.4 369 58.8
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 3.8e-109 399.1 372 59.1
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.0e-109 398.7 369 58.5
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 1.1e-108 397.5 370 58.4
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 2.5e-108 396.4 370 58.4
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.2e-108 396.0 369 58.5
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.2e-108 396.0 369 58.3
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 3.2e-108 396.0 372 59.4
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 9.4e-108 394.4 372 58.9
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 3.6e-107 392.5 370 57.8
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 4.7e-107 392.1 369 57.2
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 6.1e-107 391.7 387 56.3
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 6.1e-107 391.7 377 59.2
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.4e-106 390.6 369 58.0
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 1.8e-106 390.2 389 56.0
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 8.8e-106 387.9 376 55.6
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 1.2e-105 387.5 371 58.2
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 7.5e-105 384.8 371 58.8
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 9.8e-105 384.4 359 59.6
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 2.2e-104 383.3 368 57.6
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 4.8e-104 382.1 372 57.5
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 4.8e-104 382.1 377 57.6
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 5.4e-103 378.6 377 54.6
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 5.4e-103 378.6 372 57.5
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 1.2e-102 377.5 353 62.3
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 1.3e-101 374.0 361 59.3
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 1.1e-100 370.9 381 55.9
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 1.5e-100 370.5 381 55.6
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 5.5e-100 368.6 373 53.4
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 1.4e-98 364.0 363 56.2
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 1.8e-98 363.6 372 55.4
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 3.0e-98 362.8 352 57.1
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 8.8e-98 361.3 371 55.5
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 8.8e-98 361.3 352 58.0
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 8.8e-98 361.3 367 56.7
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 5.7e-97 358.6 371 54.4
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 2.2e-96 356.7 341 58.1
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.7e-96 355.9 368 54.9
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.7e-96 355.9 369 54.5
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 4.1e-95 352.4 370 54.3
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 1.6e-94 350.5 375 53.3
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 6.6e-93 345.1 324 59.9
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 1.5e-92 344.0 371 51.8
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 1.9e-92 343.6 362 53.9
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 2.1e-91 340.1 382 50.8
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 2.1e-91 340.1 341 54.8
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 2.8e-91 339.7 383 50.7
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 2.3e-90 336.7 379 51.5
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 9.8e-89 331.3 345 54.8
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 1.4e-87 327.4 369 50.7
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 1.0e-85 321.2 414 46.9
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 1.2e-83 314.3 322 55.3
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 4.7e-83 312.4 374 52.9
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.8e-82 310.5 369 50.1
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 2.1e-75 287.0 373 46.4
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 2.1e-75 287.0 373 46.1
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 3.6e-75 286.2 224 63.4
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.8e-73 278.9 325 49.5
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 3.7e-72 276.2 349 47.0
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 6.4e-72 275.4 210 66.2
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 1.7e-69 267.3 213 63.8
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 3.0e-69 266.5 215 64.7
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.5e-68 264.2 356 46.9
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 2.5e-68 263.5 373 43.7
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 5.6e-68 262.3 374 47.1
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.0e-66 256.1 275 54.2
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 1.2e-62 244.6 371 44.2
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.0e-61 241.5 369 44.4
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.3e-60 236.5 369 42.8
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.1e-59 231.9 190 63.2
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.6e-57 225.3 369 42.0
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 4.6e-54 216.1 171 64.9
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 2.3e-53 213.8 380 41.1
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 3.1e-50 203.4 179 60.9
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 6.9e-50 202.2 343 41.1
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 9.9e-49 198.4 180 59.4
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 2.1e-46 190.7 174 58.6
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 8.7e-45 185.3 212 49.1
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 1.9e-44 184.1 222 44.6
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 1.4e-39 167.9 148 60.8
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 1.4e-39 167.9 327 34.3
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 7.9e-30 135.6 241 37.3
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 4.3e-28 129.8 196 40.3
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 2.3e-21 107.5 149 46.3
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 2.3e-21 107.5 73 74.0
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 9.7e-20 102.1 81 65.4
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 1.2e-14 85.1 99 50.5
BcaC05g25535 Brassica carinata HOM05D007396 ORTHO05D009228 2.1e-14 84.3 102 51.0
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 5.1e-13 79.7 340 33.2
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 6.9e-10 69.3 41 75.6
SEGI_21917 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 2.9e-08 63.9 40 70.0


User provided reference genes

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