Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 5.6e-251 870.5 464 100.0
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 9.8e-195 683.7 491 75.6
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 3.5e-192 675.2 492 74.8
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 2.7e-184 649.0 491 71.9
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 3.6e-181 638.6 484 71.9
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 1.8e-180 636.3 484 71.7
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 4.0e-180 635.2 483 71.8
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 1.2e-179 633.6 483 71.8
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 7.5e-179 630.9 491 70.7
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 1.9e-161 573.2 490 64.3
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 7.4e-126 454.9 506 52.8
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 3.4e-123 446.0 474 55.1
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 9.3e-121 438.0 481 53.0
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 2.1e-120 436.8 494 52.6
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 3.9e-119 432.6 505 52.1
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 9.6e-118 427.9 460 54.6
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 3.7e-117 426.0 473 53.1
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 1.4e-116 424.1 346 65.9
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 1.8e-116 423.7 460 54.1
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 2.4e-116 423.3 457 54.3
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 5.3e-116 422.2 523 49.3
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 7.6e-115 418.3 457 53.6
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 1.7e-114 417.2 481 51.6
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 2.2e-114 416.8 345 64.6
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 6.5e-114 415.2 346 63.9
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 1.1e-113 414.5 486 51.4
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.4e-113 414.1 346 63.6
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 1.9e-113 413.7 350 64.3
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 2.5e-113 413.3 345 63.8
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 5.5e-113 412.1 346 63.3
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 2.1e-112 410.2 506 49.0
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 2.1e-112 410.2 511 49.7
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 3.5e-112 409.5 455 53.2
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 4.6e-112 409.1 411 55.7
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 1.3e-111 407.5 480 51.0
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 3.0e-111 406.4 330 65.2
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 5.1e-111 405.6 346 63.3
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 4.3e-110 402.5 483 50.5
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 1.3e-109 401.0 510 47.1
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 2.2e-109 400.2 445 53.7
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 2.8e-109 399.8 500 50.2
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 3.7e-109 399.4 483 50.3
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 6.3e-109 398.7 469 51.6
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.8e-108 397.1 491 49.3
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 1.8e-108 397.1 361 59.3
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 3.1e-108 396.4 513 47.4
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 4.1e-108 396.0 479 50.3
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 4.1e-108 396.0 494 49.2
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 1.2e-107 394.4 506 48.8
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 1.5e-107 394.0 344 61.6
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 2.2e-106 390.2 346 60.4
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 2.9e-106 389.8 513 48.0
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 8.5e-106 388.3 346 59.5
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 1.2e-104 384.4 447 50.6
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 7.9e-104 381.7 347 58.8
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 1.0e-103 381.3 454 49.8
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 1.4e-103 380.9 407 54.3
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 1.8e-103 380.6 479 47.8
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 2.3e-103 380.2 484 48.1
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 5.1e-103 379.0 425 52.9
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 2.8e-101 373.2 478 46.9
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 1.8e-100 370.5 501 47.3
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 1.0e-95 354.8 453 47.7
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 2.3e-95 353.6 499 45.1
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 3.0e-95 353.2 286 65.0
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 3.9e-95 352.8 395 52.7
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 1.5e-94 350.9 502 44.6
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 2.0e-94 350.5 424 51.4
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 1.4e-92 344.4 462 46.8
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 2.4e-92 343.6 346 54.6
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 7.0e-92 342.0 421 49.6
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 9.1e-92 341.7 436 48.2
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 9.1e-92 341.7 504 44.8
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 1.6e-91 340.9 346 56.6
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 1.6e-91 340.9 346 56.6
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 1.0e-90 338.2 380 51.1
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 6.5e-90 335.5 461 43.6
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 2.7e-88 330.1 462 42.4
Carub.0007s2301 Capsella rubella HOM05D006050 ORTHO05D007457 2.7e-88 330.1 194 89.2
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 2.3e-87 327.0 302 61.6
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 2.0e-86 323.9 491 44.6
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 1.3e-85 321.2 326 56.1
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 1.3e-85 321.2 348 49.1
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 1.4e-84 317.8 441 44.4
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 4.5e-83 312.8 399 45.9
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 1.0e-82 311.6 343 51.0
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 3.6e-80 303.1 345 49.6
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 2.8e-77 293.5 299 55.5
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.3e-74 284.6 571 36.1
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 5.0e-74 282.7 274 59.9
BcaNung05669 Brassica carinata HOM05D006050 ORTHO05D007457 1.6e-72 277.7 166 88.6
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 4.1e-68 263.1 345 45.5
MBI10_g02216_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 4.3e-65 253.1 195 68.2
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 5.9e-59 232.6 473 38.7
Lalb_Chr18g0055531 Lupinus albus HOM05D006050 ORTHO05D007457 1.4e-55 221.5 194 62.4
PGSC0003DMG401021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 2.6e-54 217.2 166 69.9
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 3.3e-41 173.7 316 39.2
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 5.6e-41 172.9 344 38.4
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 5.2e-39 166.4 265 41.9
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 8.9e-39 165.6 313 37.4
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 5.8e-38 162.9 275 41.1
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 2.2e-37 161.0 332 36.7
SEGI_20862 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 7.1e-36 156.0 123 65.9
Cpa.g.sc166.18 Carica papaya HOM05D006050 ORTHO05D007457 6.0e-35 152.9 106 74.5
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 3.0e-34 150.6 151 51.7
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 2.5e-33 147.5 174 51.1
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 2.5e-33 147.5 150 50.0
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 6.2e-32 142.9 150 53.3
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 1.8e-31 141.4 150 49.3
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.4e-31 141.0 150 49.3
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 4.9e-29 133.3 196 41.8
AUR62030212 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.4e-28 131.7 144 51.4
MCO07G478 Micromonas commoda HOM05D006050 ORTHO05D007457 3.2e-28 130.6 359 32.9
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 3.6e-24 117.1 121 52.9
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 2.4e-23 114.4 276 36.2
PSO063G2775 Papaver somniferum HOM05D006050 ORTHO05D007457 1.2e-22 112.1 105 59.0
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 8.4e-21 105.9 77 71.4
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 1.9e-20 104.8 153 42.5
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 9.3e-20 102.4 282 31.9
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 1.0e-18 99.0 151 40.4
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 8.7e-18 95.9 268 29.5
CSS0043541 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 4.3e-17 93.6 64 76.6
DCAR_011844 Daucus carota HOM05D006050 ORTHO05D007457 6.0e-11 73.2 83 53.0
COL.COLO4_31088 Corchorus olitorius HOM05D006050 ORTHO05D007457 1.5e-09 68.6 61 55.7


User provided reference genes

Program Settings