Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G8900 Aethionema arabicum HOM05D007964 ORTHO05D010090 1.1e-77 293.1 139 100.0
Sp5g26770 Schrenkiella parvula HOM05D007964 ORTHO05D010090 3.1e-56 221.9 141 77.3
Thhalv10019796m.g Eutrema salsugineum HOM05D007964 ORTHO05D010090 2.9e-54 215.3 140 77.9
AL2G31310 Arabidopsis lyrata HOM05D007964 ORTHO05D010090 1.6e-52 209.5 139 72.7
AT1G71740 Arabidopsis thaliana HOM05D007964 ORTHO05D010090 3.6e-52 208.4 139 73.4
BolC6t39631H Brassica oleracea HOM05D007964 ORTHO05D010090 4.7e-52 208.0 139 74.1
BraA07t31354Z Brassica rapa HOM05D007964 ORTHO05D010090 8.0e-52 207.2 139 74.1
Carub.0002s1850 Capsella rubella HOM05D007964 ORTHO05D010090 3.0e-51 205.3 139 71.9
BcaC08g46600 Brassica carinata HOM05D007964 ORTHO05D010090 4.0e-51 204.9 139 73.4
C06p45790 Brassica napus HOM05D007964 ORTHO05D010090 4.0e-51 204.9 139 73.4
A07p37890 Brassica napus HOM05D007964 ORTHO05D010090 8.9e-51 203.8 139 72.7
CARHR291050 Cardamine hirsuta HOM05D007964 ORTHO05D010090 2.0e-50 202.6 139 70.5
THA.LOC104810508 Tarenaya hassleriana HOM05D007964 ORTHO05D010090 3.4e-42 175.3 133 65.4
SalBow6G4546 Salvia bowleyana HOM05D007964 ORTHO05D010090 1.2e-31 140.2 141 52.5
Potri.005G198200 Populus trichocarpa HOM05D007964 ORTHO05D010090 7.8e-31 137.5 139 55.4
Manes.02G184300 Manihot esculenta HOM05D007964 ORTHO05D010090 3.0e-30 135.6 141 51.1
Ciclev10003908m.g Citrus clementina HOM05D007964 ORTHO05D010090 1.5e-29 133.3 141 53.9
Thecc.08G162400 Theobroma cacao HOM05D007964 ORTHO05D010090 2.8e-28 129.0 139 46.8
CsaV3_6G004920 Cucumis sativus L. HOM05D007964 ORTHO05D010090 6.2e-28 127.9 141 48.9
MELO3C019968.2 Cucumis melo HOM05D007964 ORTHO05D010090 1.8e-27 126.3 141 48.9
Atru.chr13.1988 Acer truncatum HOM05D007964 ORTHO05D010090 6.8e-27 124.4 132 52.3
Sabra05G0151100 Salix brachista HOM05D007964 ORTHO05D010090 2.6e-26 122.5 139 50.4
Sed0027049 Sechium edule HOM05D007964 ORTHO05D010090 2.6e-26 122.5 146 47.9
Cfa018267 Carpinus fangiana HOM05D007964 ORTHO05D010090 9.9e-26 120.6 132 49.2
QL02p037092 Quercus lobata HOM05D007964 ORTHO05D010090 9.9e-26 120.6 141 47.5
Migut.N02947 Erythranthe guttata HOM05D007964 ORTHO05D010090 2.9e-25 119.0 131 48.1
QL02p036563 Quercus lobata HOM05D007964 ORTHO05D010090 2.9e-25 119.0 141 47.5
Sed0009872 Sechium edule HOM05D007964 ORTHO05D010090 3.7e-25 118.6 146 47.3
Lalb_Chr19g0130001 Lupinus albus HOM05D007964 ORTHO05D010090 4.9e-25 118.2 142 49.3
FvH4_2g12880 Fragaria vesca HOM05D007964 ORTHO05D010090 6.4e-25 117.9 140 51.4
FAN20G1166 Fragaria x ananassa HOM05D007964 ORTHO05D010090 6.4e-25 117.9 142 49.3
FAN24G2710 Fragaria x ananassa HOM05D007964 ORTHO05D010090 6.4e-25 117.9 140 51.4
Oeu046067.1 Olea europaea HOM05D007964 ORTHO05D010090 6.4e-25 117.9 128 49.2
ClCG08G007250 Citrullus lanatus HOM05D007964 ORTHO05D010090 8.4e-25 117.5 148 45.9
Migut.O00757 Erythranthe guttata HOM05D007964 ORTHO05D010090 8.4e-25 117.5 131 47.3
Haze_17821 Corylus avellana HOM05D007964 ORTHO05D010090 1.4e-24 116.7 132 47.7
RcHm_v2.0_Chr6g0273981 Rosa chinensis HOM05D007964 ORTHO05D010090 1.4e-24 116.7 140 51.4
CiPaw.15G011700 Carya illinoinensis HOM05D007964 ORTHO05D010090 1.9e-24 116.3 139 47.5
Ca_04662_v3 Cicer arietinum L. HOM05D007964 ORTHO05D010090 2.4e-24 115.9 130 47.7
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 3.2e-24 115.5 139 46.0
Glyma.02G078400 Glycine max HOM05D007964 ORTHO05D010090 4.1e-24 115.2 140 46.4
Glyma.16G161400 Glycine max HOM05D007964 ORTHO05D010090 5.4e-24 114.8 139 44.6
Phvul.004G087600 Phaseolus vulgaris HOM05D007964 ORTHO05D010090 5.4e-24 114.8 130 45.4
Hma1.2p1_0678F.1_g202130 Hydrangea macrophylla HOM05D007964 ORTHO05D010090 2.1e-23 112.8 130 50.8
Medtr6g039830 Medicago truncatula HOM05D007964 ORTHO05D010090 2.1e-23 112.8 123 49.6
PGR042G2516 Punica granatum HOM05D007964 ORTHO05D010090 6.0e-23 111.3 124 50.0
SGA_v2.0_scaffold54G19690 Striga asiatica HOM05D007964 ORTHO05D010090 6.0e-23 111.3 131 49.6
Gohir.A06G112000 Gossypium hirsutum HOM05D007964 ORTHO05D010090 1.3e-22 110.2 144 45.8
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 1.3e-22 110.2 144 47.2
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 1.7e-22 109.8 144 47.2
FAN27G1192 Fragaria x ananassa HOM05D007964 ORTHO05D010090 2.3e-22 109.4 142 47.2
Psat0s1172g0240 Pisum sativum HOM05D007964 ORTHO05D010090 2.3e-22 109.4 130 46.2
COL.COLO4_29112 Corchorus olitorius HOM05D007964 ORTHO05D010090 3.9e-22 108.6 141 45.4
AUR62034908 Chenopodium quinoa HOM05D007964 ORTHO05D010090 8.6e-22 107.5 140 46.4
Prupe.8G043200 Prunus persica HOM05D007964 ORTHO05D010090 1.1e-21 107.1 135 45.9
CSS0006430 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.5e-21 106.7 131 46.6
CSS0037867 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.5e-21 106.7 131 46.6
Ah.05g167820 Amaranthus hybridus HOM05D007964 ORTHO05D010090 1.9e-21 106.3 121 48.8
AUR62026621 Chenopodium quinoa HOM05D007964 ORTHO05D010090 2.5e-21 105.9 143 47.6
Potri.002G062950 Populus trichocarpa HOM05D007964 ORTHO05D010090 2.5e-21 105.9 140 47.1
PGSC0003DMG400025075 Solanum tuberosum HOM05D007964 ORTHO05D010090 5.6e-21 104.8 143 46.2
CANSAT25G1394 Cannabis sativa HOM05D007964 ORTHO05D010090 3.6e-20 102.1 141 42.6
Lsat_1_v5_gn_6_100061 Lactuca sativa HOM05D007964 ORTHO05D010090 3.6e-20 102.1 110 50.0
Peaxi162Scf00360g00092 Petunia axillaris HOM05D007964 ORTHO05D010090 4.7e-20 101.7 140 42.1
Aqoxy6G00437 Aquilegia oxysepala HOM05D007964 ORTHO05D010090 1.1e-19 100.5 132 43.2
Nn5g28859 Nelumbo nucifera HOM05D007964 ORTHO05D010090 3.1e-19 99.0 131 46.6
Rhsim06G0092800 Rhododendron simsii HOM05D007964 ORTHO05D010090 3.1e-19 99.0 119 50.4
Nitab4.5_0003178g0050 Nicotiana tabacum HOM05D007964 ORTHO05D010090 9.9e-18 94.0 107 48.6
Nitab4.5_0003443g0080 Nicotiana tabacum HOM05D007964 ORTHO05D010090 1.9e-16 89.7 108 47.2
DCAR_001195 Daucus carota HOM05D007964 ORTHO05D010090 4.2e-16 88.6 101 48.5
CAN.G1183.20 Capsicum annuum HOM05D007964 ORTHO05D010090 1.2e-15 87.0 104 46.2
Sopen04g028110 Solanum pennellii HOM05D007964 ORTHO05D010090 6.0e-15 84.7 109 46.8
Os02g0210900 Oryza sativa ssp. japonica HOM05D007964 ORTHO05D010090 6.2e-12 74.7 116 43.1
CSS0037942 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.5e-10 70.1 60 56.7
ATR1120G014 Amborella trichopoda HOM05D007964 ORTHO05D010090 2.9e-09 65.9 124 37.1
Nn3g17698 Nelumbo nucifera HOM05D002803 ORTHO05D003089 4.6e-07 58.5 41 65.9
TAR629G1495 Trochodendron aralioides HOM05D002803 ORTHO05D003089 4.6e-07 58.5 113 34.5
Potri.017G128700 Populus trichocarpa HOM05D008294 ORTHO05D010468 6.0e-07 58.2 145 31.7
Sabra17G0107200 Salix brachista HOM05D008294 ORTHO05D010468 6.0e-07 58.2 119 31.9
Zm00001eb205370 Zea mays HOM05D007964 ORTHO05D010090 1.3e-06 57.0 34 67.6
C08p04510 Brassica napus HOM05D002803 ORTHO05D003089 2.3e-06 56.2 108 33.3
Nitab4.5_0000221g0090 Nicotiana tabacum HOM05D002803 ORTHO05D003089 3.0e-06 55.8 106 31.1
Sed0004956 Sechium edule HOM05D002803 ORTHO05D003089 3.0e-06 55.8 117 34.2
TAR622G0697 Trochodendron aralioides HOM05D002803 ORTHO05D003089 3.0e-06 55.8 107 32.7
HPP92_000633 Vanilla planifolia HOM05D007964 ORTHO05D010090 3.0e-06 55.8 106 34.0
MSTRG.813 Avicennia marina HOM05D002803 ORTHO05D003089 3.9e-06 55.5 137 31.4
BolC8t47256H Brassica oleracea HOM05D002803 ORTHO05D003089 3.9e-06 55.5 108 33.3
MBI18_g04565_MAGBIO Magnolia biondii HOM05D007964 ORTHO05D241154 5.1e-06 55.1 101 34.7
Nitab4.5_0005803g0020 Nicotiana tabacum HOM05D002803 ORTHO05D003089 5.1e-06 55.1 99 33.3
Potri.004G088300 Populus trichocarpa HOM05D008294 ORTHO05D010468 5.1e-06 55.1 143 30.8
unitig_52.g17150 Utricularia gibba HOM05D002803 ORTHO05D003089 5.1e-06 55.1 131 30.5
Nn4g23707 Nelumbo nucifera HOM05D002803 ORTHO05D003089 6.6e-06 54.7 42 59.5
Nn4g23709 Nelumbo nucifera HOM05D002803 ORTHO05D003089 6.6e-06 54.7 42 59.5
PSO017G4670 Papaver somniferum HOM05D002803 ORTHO05D003089 6.6e-06 54.7 43 60.5
PSO478G0765 Papaver somniferum HOM05D002803 ORTHO05D003089 6.6e-06 54.7 43 60.5
PSO724G0959 Papaver somniferum HOM05D002803 ORTHO05D003089 6.6e-06 54.7 141 34.0
Phvul.011G168000 Phaseolus vulgaris HOM05D007501 ORTHO05D009528 6.6e-06 54.7 36 55.6
Potri.010G130600 Populus trichocarpa HOM05D002803 ORTHO05D003089 6.6e-06 54.7 56 44.6
Zm00001eb314570 Zea mays HOM05D007501 ORTHO05D009528 6.6e-06 54.7 39 59.0
A08p04240 Brassica napus HOM05D002803 ORTHO05D003089 8.7e-06 54.3 153 32.0
BraA08t32452Z Brassica rapa HOM05D002803 ORTHO05D003089 8.7e-06 54.3 153 32.0


User provided reference genes

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