Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 6.1e-243 844.0 503 100.0
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 5.3e-162 575.1 558 57.2
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 4.8e-155 552.0 562 61.9
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 5.3e-154 548.5 556 61.9
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 5.0e-152 542.0 507 64.9
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 3.2e-151 539.3 500 64.4
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 5.5e-151 538.5 509 63.7
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 2.2e-144 516.5 503 62.6
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 1.6e-142 510.4 503 62.0
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 1.6e-142 510.4 481 64.4
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 4.4e-140 502.3 501 54.3
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 1.7e-139 500.4 475 55.6
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 2.8e-139 499.6 501 54.1
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 8.2e-139 498.0 480 63.5
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 3.1e-138 496.1 509 61.7
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 1.7e-136 490.3 437 57.4
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 2.8e-131 473.0 491 52.1
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 1.9e-127 460.3 340 65.9
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 7.5e-108 395.2 339 59.3
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 2.2e-107 393.7 330 57.6
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.8e-106 390.6 339 56.6
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 1.8e-106 390.6 337 57.6
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 3.2e-106 389.8 342 54.7
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 7.0e-106 388.7 330 57.0
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 1.6e-105 387.5 330 57.0
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 2.0e-105 387.1 340 54.7
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 4.6e-105 386.0 330 58.5
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 3.0e-104 383.3 330 56.1
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 3.9e-104 382.9 341 62.8
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 7.3e-103 378.6 332 57.5
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 6.2e-102 375.6 341 54.3
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 1.8e-101 374.0 329 57.8
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 1.2e-100 371.3 341 54.8
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 2.0e-100 370.5 340 57.4
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 2.0e-100 370.5 341 53.4
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 2.6e-100 370.2 328 64.9
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 7.5e-100 368.6 340 52.6
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 7.5e-100 368.6 337 53.4
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 2.2e-99 367.1 341 52.5
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 2.9e-99 366.7 299 57.5
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 2.9e-99 366.7 340 57.1
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 4.9e-99 365.9 328 64.0
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 6.4e-99 365.5 338 64.2
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 1.4e-98 364.4 265 67.5
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.4e-98 364.4 313 55.3
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 3.2e-98 363.2 338 62.7
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 5.4e-98 362.5 328 51.8
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 9.2e-98 361.7 338 63.9
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.2e-97 361.3 339 52.5
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 3.5e-97 359.8 321 53.9
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 4.6e-97 359.4 338 53.0
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 7.8e-97 358.6 341 61.0
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 7.8e-97 358.6 340 55.0
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 1.0e-96 358.2 485 42.1
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.3e-96 357.8 338 54.1
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 2.3e-96 357.1 341 61.3
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 2.3e-96 357.1 513 42.1
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 3.9e-96 356.3 341 54.3
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 3.9e-96 356.3 508 41.5
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 1.5e-95 354.4 338 61.2
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.9e-95 354.0 338 55.9
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 2.5e-95 353.6 342 60.5
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 5.6e-95 352.4 338 52.7
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 9.5e-95 351.7 338 52.1
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 1.2e-94 351.3 342 60.2
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 1.6e-94 350.9 374 49.5
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.1e-94 350.5 340 53.8
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 3.6e-94 349.7 308 53.6
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 4.7e-94 349.4 340 52.4
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 8.1e-94 348.6 339 51.3
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 8.1e-94 348.6 298 55.7
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 1.8e-93 347.4 340 51.2
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.3e-93 347.1 327 62.4
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 4.0e-93 346.3 344 51.7
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 6.8e-93 345.5 340 50.9
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 8.9e-93 345.1 329 52.6
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 1.5e-92 344.4 449 43.0
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 2.0e-92 344.0 340 52.6
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.6e-92 343.6 328 61.9
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 2.6e-92 343.6 341 50.7
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 3.4e-92 343.2 340 50.3
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 3.4e-92 343.2 340 60.3
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 5.8e-92 342.4 340 53.5
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 9.9e-92 341.7 308 54.5
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.7e-91 340.9 328 61.6
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 3.7e-91 339.7 501 40.5
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.1e-90 338.2 340 51.2
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.4e-90 337.8 328 61.3
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 1.4e-90 337.8 341 49.9
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 1.9e-90 337.4 446 42.2
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 2.4e-90 337.0 327 52.3
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 4.1e-90 336.3 325 52.3
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 7.1e-90 335.5 333 50.2
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 1.2e-89 334.7 517 41.0
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 1.2e-89 334.7 498 39.6
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 1.6e-89 334.3 328 50.0
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 3.5e-89 333.2 432 43.8
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 3.5e-89 333.2 344 56.1
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 4.6e-89 332.8 342 48.8
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 1.3e-88 331.3 336 50.6
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 1.3e-88 331.3 339 54.3
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 1.3e-88 331.3 323 50.8
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 3.0e-88 330.1 342 50.0
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 3.9e-88 329.7 341 57.8
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 5.1e-88 329.3 218 72.9
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 1.1e-87 328.2 471 41.2
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 1.1e-87 328.2 340 48.8
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 1.5e-87 327.8 490 38.6
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 2.5e-87 327.0 340 47.9
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 4.3e-87 326.2 352 49.4
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 9.5e-87 325.1 337 50.1
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 9.5e-87 325.1 352 49.1
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 6.2e-86 322.4 341 47.5
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 1.8e-85 320.9 345 47.2
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 2.4e-85 320.5 327 58.7
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 3.1e-85 320.1 346 46.8
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 4.0e-85 319.7 470 38.7
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 4.0e-85 319.7 345 49.3
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 5.2e-85 319.3 341 50.1
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 6.8e-85 318.9 335 49.3
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 8.9e-85 318.5 344 46.8
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 2.9e-83 313.5 343 47.5
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 4.9e-83 312.8 343 47.5
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 8.4e-83 312.0 310 51.3
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.1e-82 311.6 312 54.2
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.6e-81 307.8 326 48.8
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 3.5e-81 306.6 336 47.0
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.2e-78 298.1 322 56.2
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 2.1e-78 297.4 221 62.9
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 8.1e-78 295.4 327 45.0
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 3.1e-77 293.5 340 45.3
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 5.8e-76 289.3 528 35.4
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 3.8e-75 286.6 340 45.9
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 4.3e-71 273.1 334 42.8
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 2.1e-70 270.8 270 49.3
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 2.8e-70 270.4 274 50.4
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 8.4e-67 258.8 289 44.6
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.4e-66 257.3 267 51.7
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 2.1e-65 254.2 267 60.7
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 3.0e-64 250.4 336 39.9
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 6.2e-54 216.1 327 36.1
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.1e-53 213.8 324 37.0
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.4e-52 210.3 208 48.1
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.5e-52 209.9 208 48.1
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.5e-52 209.9 208 47.6
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 5.8e-52 209.5 324 39.5
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 6.5e-51 206.1 193 48.7
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 3.2e-50 203.8 202 48.5
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 1.0e-48 198.7 270 38.1
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 2.2e-46 191.0 142 66.2
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 2.6e-44 184.1 340 32.6
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 1.0e-43 182.2 275 33.5
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 1.0e-43 182.2 290 34.5
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.9e-42 177.9 271 35.8
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 6.1e-41 172.9 170 48.8
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 7.9e-41 172.6 129 67.4
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 2.8e-38 164.1 330 30.0
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.0e-35 155.6 118 61.0
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.3e-35 155.2 214 37.4
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.3e-35 155.2 157 51.0
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.6e-33 148.3 288 31.6
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.6e-33 148.3 288 31.6
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 2.3e-32 144.4 273 30.0
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 7.7e-28 129.4 164 56.1
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 6.7e-24 116.3 191 33.5
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.5e-18 98.6 86 54.7
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 7.2e-18 96.3 132 33.3
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 1.0e-16 92.4 65 63.1
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 4.4e-15 87.0 89 44.9
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.2e-12 79.0 265 25.7
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.6e-12 78.6 116 41.4
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 2.3e-08 64.7 59 45.8


User provided reference genes

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