Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG2G3150 Aethionema arabicum HOM05D002536 ORTHO05D006290 5.6e-220 767.3 387 100.0
Thhalv10018669m.g Eutrema salsugineum HOM05D002536 ORTHO05D006290 1.7e-192 676.0 398 84.7
AL2G23020 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 8.4e-192 673.7 398 84.2
BcaB03g15263 Brassica carinata HOM05D002536 ORTHO05D006290 2.3e-189 665.6 400 83.5
BraA07t30972Z Brassica rapa HOM05D002536 ORTHO05D006290 2.3e-189 665.6 400 83.2
AT1G66510 Arabidopsis thaliana HOM05D002536 ORTHO05D006290 2.5e-188 662.1 395 83.3
A07p33460 Brassica napus HOM05D002536 ORTHO05D006290 6.2e-187 657.5 400 82.0
BcaC08g46049 Brassica carinata HOM05D002536 ORTHO05D006290 8.2e-187 657.1 396 83.3
Sp5g21560 Schrenkiella parvula HOM05D002536 ORTHO05D006290 8.2e-187 657.1 395 82.3
Carub.0002s1253 Capsella rubella HOM05D002536 ORTHO05D006290 1.8e-186 656.0 398 81.7
BolC6t39073H Brassica oleracea HOM05D002536 ORTHO05D006290 1.2e-185 653.3 400 82.2
C06p39850 Brassica napus HOM05D002536 ORTHO05D006290 4.9e-184 647.9 396 82.6
CARHR058490 Cardamine hirsuta HOM05D002536 ORTHO05D006290 1.3e-181 639.8 398 81.2
THA.LOC104805600 Tarenaya hassleriana HOM05D002536 ORTHO05D006290 2.0e-177 625.9 398 78.1
Ciclev10011939m.g Citrus clementina HOM05D002536 ORTHO05D006290 2.6e-156 555.8 389 69.7
COL.COLO4_15704 Corchorus olitorius HOM05D002536 ORTHO05D006290 4.4e-156 555.1 389 70.2
Gorai.004G064600 Gossypium raimondii HOM05D002536 ORTHO05D006290 4.1e-154 548.5 397 68.5
Gohir.A08G052800 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.0e-153 546.2 397 68.5
Gohir.D08G062400 Gossypium hirsutum HOM05D002536 ORTHO05D006290 4.5e-153 545.0 397 67.8
CANSAT78G2192 Cannabis sativa HOM05D002536 ORTHO05D006290 1.7e-152 543.1 381 69.6
Atru.chr4.1673 Acer truncatum HOM05D002536 ORTHO05D006290 3.2e-151 538.9 390 69.7
Duzib211G0581 Durio zibethinus HOM05D002536 ORTHO05D006290 4.2e-151 538.5 397 67.3
MD09G1261000 Malus domestica HOM05D002536 ORTHO05D006290 2.3e-149 532.7 389 69.2
Manes.01G115300 Manihot esculenta HOM05D002536 ORTHO05D006290 3.0e-149 532.3 394 65.7
Prupe.3G158200 Prunus persica HOM05D002536 ORTHO05D006290 4.0e-149 531.9 389 68.4
Sabra17G0102100 Salix brachista HOM05D002536 ORTHO05D006290 5.7e-148 528.1 383 67.1
Thecc.04G122200 Theobroma cacao HOM05D002536 ORTHO05D006290 9.7e-148 527.3 389 66.8
LjContig00141g0005291 Lotus japonicus HOM05D002536 ORTHO05D006290 1.3e-147 526.9 389 67.9
Rhsim10G0079100 Rhododendron simsii HOM05D002536 ORTHO05D006290 1.8e-146 523.1 380 67.9
Eucgr.F02817 Eucalyptus grandis HOM05D002536 ORTHO05D006290 2.7e-145 519.2 394 64.0
Glyma.02G247400 Glycine max HOM05D002536 ORTHO05D006290 2.7e-145 519.2 389 68.1
CiPaw.04G045800 Carya illinoinensis HOM05D002536 ORTHO05D006290 3.5e-145 518.8 392 66.1
Dinv19005 Davidia involucrata HOM05D002536 ORTHO05D006290 7.7e-145 517.7 397 66.2
Actinidia15923 Actinidia chinensis HOM05D002536 ORTHO05D006290 5.0e-144 515.0 392 65.6
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea HOM05D002536 ORTHO05D006290 6.5e-144 514.6 415 64.1
VMungo0647G1217 Vigna mungo HOM05D002536 ORTHO05D006290 8.5e-144 514.2 389 66.6
TWI74G1499 Tripterygium wilfordii HOM05D002536 ORTHO05D006290 2.5e-143 512.7 392 65.3
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea HOM05D002536 ORTHO05D006290 3.2e-143 512.3 414 64.0
Psat2g045240 Pisum sativum HOM05D002536 ORTHO05D006290 4.2e-143 511.9 389 65.8
Ah.10g037990 Amaranthus hybridus HOM05D002536 ORTHO05D006290 1.2e-142 510.4 394 63.7
Ca_05868_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 2.3e-141 506.1 380 67.1
GSVIVG01030877001 Vitis vinifera HOM05D002536 ORTHO05D006290 2.3e-141 506.1 392 65.1
PGR004G1192 Punica granatum HOM05D002536 ORTHO05D006290 4.0e-141 505.4 392 63.8
Cfa007855 Carpinus fangiana HOM05D002536 ORTHO05D006290 5.2e-141 505.0 420 61.7
QL11p004402 Quercus lobata HOM05D002536 ORTHO05D006290 5.2e-141 505.0 449 59.5
Cc07_g08220 Coffea canephora HOM05D002536 ORTHO05D006290 8.8e-141 504.2 408 63.5
Hund13689 Selenicereus undatus HOM05D002536 ORTHO05D006290 1.2e-140 503.8 392 64.3
Medtr5g079770 Medicago truncatula HOM05D002536 ORTHO05D006290 1.5e-140 503.4 392 64.0
Oeu047421.1 Olea europaea HOM05D002536 ORTHO05D006290 4.4e-140 501.9 393 63.6
Phvul.008G233500 Phaseolus vulgaris HOM05D002536 ORTHO05D006290 4.4e-140 501.9 391 65.0
TAR371G0457 Trochodendron aralioides HOM05D002536 ORTHO05D006290 5.7e-140 501.5 393 65.1
RcHm_v2.0_Chr3g0492101 Rosa chinensis HOM05D002536 ORTHO05D006290 2.2e-139 499.6 389 64.3
EL10Ac2g04489 Beta vulgaris HOM05D002536 ORTHO05D006290 6.3e-139 498.0 387 64.3
Sed0021694 Sechium edule HOM05D002536 ORTHO05D006290 3.1e-138 495.7 391 62.4
FvH4_1g30040 Fragaria vesca HOM05D002536 ORTHO05D006290 5.9e-137 491.5 391 63.2
Sabra17G0104800 Salix brachista HOM05D002536 ORTHO05D006290 1.3e-136 490.3 468 55.6
Migut.L00470 Erythranthe guttata HOM05D002536 ORTHO05D006290 1.7e-136 490.0 401 62.3
MELO3C020300.2 Cucumis melo HOM05D002536 ORTHO05D006290 2.3e-136 489.6 380 62.9
Nitab4.5_0004399g0050 Nicotiana tabacum HOM05D002536 ORTHO05D006290 2.9e-136 489.2 407 60.2
Lalb_Chr04g0251281 Lupinus albus HOM05D002536 ORTHO05D006290 6.6e-136 488.0 389 62.2
HanXRQChr11g0325221 Helianthus annuus HOM05D002536 ORTHO05D006290 4.2e-135 485.3 393 62.3
Lsat_1_v5_gn_4_154740 Lactuca sativa HOM05D002536 ORTHO05D006290 7.2e-135 484.6 389 62.0
PGSC0003DMG400030643 Solanum tuberosum HOM05D002536 ORTHO05D006290 4.7e-134 481.9 391 60.6
Sopen02g035950 Solanum pennellii HOM05D002536 ORTHO05D006290 8.9e-133 477.6 392 59.9
SGA_v2.0_scaffold329G48866 Striga asiatica HOM05D002536 ORTHO05D006290 2.0e-132 476.5 397 61.7
CsaV3_1G043810 Cucumis sativus L. HOM05D002536 ORTHO05D006290 3.4e-132 475.7 391 60.6
CAN.G625.81 Capsicum annuum HOM05D002536 ORTHO05D006290 6.3e-131 471.5 393 60.1
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 1.1e-130 470.7 393 61.6
Glyma.14G068800 Glycine max HOM05D002536 ORTHO05D006290 2.4e-130 469.5 357 66.7
ECA232G3521 Erigeron canadensis HOM05D002536 ORTHO05D006290 2.0e-129 466.5 398 60.6
FAN19G0538 Fragaria x ananassa HOM05D002536 ORTHO05D006290 2.0e-129 466.5 426 57.7
FAN28G1150 Fragaria x ananassa HOM05D002536 ORTHO05D006290 5.9e-129 464.9 424 56.8
Aqoxy3G04016 Aquilegia oxysepala HOM05D002536 ORTHO05D006290 5.0e-128 461.8 392 58.9
PSO017G6098 Papaver somniferum HOM05D002536 ORTHO05D006290 8.6e-128 461.1 394 59.4
DCAR_022460 Daucus carota HOM05D002536 ORTHO05D006290 2.1e-126 456.4 386 58.8
Nitab4.5_0002248g0030 Nicotiana tabacum HOM05D002536 ORTHO05D006290 2.8e-126 456.1 391 59.6
Nn3g18196 Nelumbo nucifera HOM05D002536 ORTHO05D006290 1.4e-125 453.8 369 62.3
Potri.017G123900 Populus trichocarpa HOM05D002536 ORTHO05D006290 2.6e-124 449.5 351 63.2
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 3.2e-122 442.6 371 60.9
AUR62023246 Chenopodium quinoa HOM05D002536 ORTHO05D006290 1.2e-121 440.7 377 58.9
vmacro05501 Vaccinium macrocarpon HOM05D002536 ORTHO05D006290 1.2e-121 440.7 504 49.0
Sc11g0008590 Simmondsia chinensis HOM05D002536 ORTHO05D006290 1.8e-117 426.8 332 65.1
Lalb_Chr04g0249391 Lupinus albus HOM05D002536 ORTHO05D006290 3.4e-116 422.5 358 60.1
Os04g0132300 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D006290 1.3e-115 420.6 393 54.7
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 6.4e-115 418.3 434 53.2
Lj4A178G42 Lonicera japonica HOM05D002536 ORTHO05D006290 1.9e-111 406.8 443 52.4
Zm00001eb088880 Zea mays HOM05D002536 ORTHO05D006290 2.4e-106 389.8 349 55.6
CDE04G0829 Ceratophyllum demersum HOM05D002536 ORTHO05D006290 3.0e-104 382.9 392 51.8
AUR62023197 Chenopodium quinoa HOM05D002536 ORTHO05D006290 5.1e-104 382.1 379 54.1
Peaxi162Scf00803g00527 Petunia axillaris HOM05D002536 ORTHO05D006290 5.2e-101 372.1 273 66.3
Solyc02g091330.4 Solanum lycopersicum HOM05D002536 ORTHO05D006290 1.9e-98 363.6 273 64.8
SalBow7G0143 Salvia bowleyana HOM05D002536 ORTHO05D006290 1.3e-96 357.5 314 57.0
FAN28G0504 Fragaria x ananassa HOM05D002536 ORTHO05D006290 9.9e-92 341.3 293 60.8
unitig_32.g11881 Utricularia gibba HOM05D002536 ORTHO05D006290 4.6e-89 332.4 399 47.9
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis HOM05D002536 ORTHO05D006290 5.1e-88 328.9 399 45.4
Pp3c15_1450 Physcomitrium patens HOM05D002536 ORTHO05D006290 1.1e-87 327.8 395 44.8
Ca_05898_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 1.0e-80 304.7 249 63.5
Cpa.g.sc116.21 Carica papaya HOM05D002536 ORTHO05D006290 1.3e-80 304.3 221 67.4
SMO196G0007 Selaginella moellendorffii HOM05D002536 ORTHO05D006290 1.8e-80 303.9 393 43.3
ATR0686G028 Amborella trichopoda HOM05D002536 ORTHO05D006290 8.1e-78 295.0 296 52.0
TPR.G3505 Trifolium pratense HOM05D002536 ORTHO05D006290 4.2e-74 282.7 234 62.8
CBR_g28641 Chara braunii HOM05D002536 ORTHO05D006290 1.2e-68 264.6 484 34.5
QL11p004257 Quercus lobata HOM05D002536 ORTHO05D006290 4.2e-66 256.1 194 66.5
MSTRG.3529 Avicennia marina HOM05D002536 ORTHO05D006290 2.1e-65 253.8 240 55.8
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis HOM05D002536 ORTHO05D006290 3.0e-64 250.0 366 39.3
Mapoly0209s0005 Marchantia polymorpha HOM05D002536 ORTHO05D006290 2.6e-60 236.9 317 41.6
Cpa.g.sc116.20 Carica papaya HOM05D002536 ORTHO05D006290 8.5e-51 205.3 148 67.6
Cre05.g244750 Chlamydomonas reinhardtii HOM05D002536 ORTHO05D006290 1.5e-39 167.9 534 26.2
QL11p004418 Quercus lobata HOM05D002536 ORTHO05D006290 3.1e-37 160.2 137 63.5
QL11p004025 Quercus lobata HOM05D002536 ORTHO05D006290 1.0e-35 155.2 108 67.6
Gorai.004G103000 Gossypium raimondii HOM05D002536 ORTHO05D006290 2.5e-34 150.6 147 53.1
Gohir.A07G193350 Gossypium hirsutum HOM05D002536 ORTHO05D006290 5.5e-34 149.4 101 68.3
Gohir.A08G229450 Gossypium hirsutum HOM05D002536 ORTHO05D006290 5.5e-34 149.4 101 68.3
Gohir.A12G000900 Gossypium hirsutum HOM05D002536 ORTHO05D006290 5.5e-34 149.4 101 68.3
Gohir.D02G177580 Gossypium hirsutum HOM05D002536 ORTHO05D006290 5.5e-34 149.4 101 68.3
Gohir.A10G143300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 9.4e-34 148.7 101 68.3
Gohir.A09G155300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.6e-33 147.9 101 67.3
Gohir.D02G126132 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.0e-32 145.2 147 51.0
Gohir.D04G118901 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.3e-32 144.1 138 53.6
TPR.G3492 Trifolium pratense HOM05D002536 ORTHO05D006290 7.5e-31 139.0 104 60.6
TPR.G39323 Trifolium pratense HOM05D002536 ORTHO05D006290 2.8e-30 137.1 80 81.2
TPR.G18743 Trifolium pratense HOM05D002536 ORTHO05D006290 5.9e-28 129.4 172 42.4
VMungo0464G1199 Vigna mungo HOM05D002536 ORTHO05D006290 5.9e-28 129.4 79 74.7
Gorai.010G146900 Gossypium raimondii HOM05D002536 ORTHO05D006290 5.0e-27 126.3 81 70.4
Gohir.D06G126066 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.7e-25 120.6 70 77.1
QL11p004209 Quercus lobata HOM05D002536 ORTHO05D006290 2.7e-25 120.6 108 57.4
Gohir.D03G005233 Gossypium hirsutum HOM05D002536 ORTHO05D006290 8.8e-24 115.5 71 76.1
Gorai.007G247100 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.2e-23 115.2 70 75.7
Gorai.012G115800 Gossypium raimondii HOM05D002536 ORTHO05D006290 2.6e-23 114.0 71 74.6
TPR.G4379 Trifolium pratense HOM05D002536 ORTHO05D006290 3.7e-22 110.2 114 48.2
Gorai.003G061900 Gossypium raimondii HOM05D002536 ORTHO05D006290 2.4e-21 107.5 71 73.2
Gohir.D10G126550 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.0e-20 104.4 71 69.0
FAN28G2473 Fragaria x ananassa HOM05D002536 ORTHO05D006290 1.5e-18 98.2 60 75.0
TPR.G15212 Trifolium pratense HOM05D002536 ORTHO05D006290 2.5e-18 97.4 71 60.6
TPR.G3477 Trifolium pratense HOM05D002536 ORTHO05D006290 3.3e-18 97.1 239 33.9
Gohir.D11G077800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 5.5e-18 96.3 147 40.1
TPR.G3463 Trifolium pratense HOM05D002536 ORTHO05D006290 3.4e-15 87.0 158 38.6
SEGI_34356 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 4.9e-14 83.2 69 56.5
TPR.G22657 Trifolium pratense HOM05D002536 ORTHO05D006290 4.5e-12 76.6 54 68.5
TPR.G5666 Trifolium pratense HOM05D002536 ORTHO05D006290 2.3e-11 74.3 70 55.7
SEGI_27826 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 7.3e-10 69.3 89 38.2
AL2G24330 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 3.6e-09 67.0 40 82.5
ClCG05G010860 Citrullus lanatus HOM05D002536 ORTHO05D006290 2.3e-08 64.3 43 67.4
TPR.G3472 Trifolium pratense HOM05D002536 ORTHO05D000008 3.4e-07 60.5 32 81.2


User provided reference genes

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