Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 7.8e-251 870.2 495 100.0
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 1.4e-215 753.1 495 86.7
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 2.8e-131 473.0 518 57.3
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 4.5e-97 359.4 611 41.2
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 8.0e-46 189.1 484 33.9
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 2.3e-45 187.6 492 34.1
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 3.5e-41 173.7 261 44.1
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 3.6e-38 163.7 371 34.2
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 3.6e-38 163.7 400 34.5
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 8.1e-38 162.5 376 37.8
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 1.3e-35 155.2 274 39.8
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 1.7e-35 154.8 342 34.8
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 2.4e-34 151.0 347 35.4
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 2.1e-33 147.9 242 41.7
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 3.5e-33 147.1 480 30.2
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 6.0e-33 146.4 334 35.9
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 1.3e-32 145.2 503 32.4
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 1.7e-32 144.8 274 39.1
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 1.7e-32 144.8 536 27.6
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 2.3e-32 144.4 364 33.2
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 3.0e-32 144.1 327 34.6
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 3.0e-32 144.1 474 31.2
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 3.9e-32 143.7 461 29.7
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 6.6e-32 142.9 323 35.6
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 8.6e-32 142.5 463 31.3
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 7.3e-31 139.4 485 29.7
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 9.5e-31 139.0 269 36.4
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 9.5e-31 139.0 366 32.5
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.2e-30 138.7 476 29.6
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 2.8e-30 137.5 275 35.6
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 4.7e-30 136.7 254 37.8
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 6.2e-30 136.3 361 33.8
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.1e-29 135.6 362 33.1
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 5.2e-29 133.3 251 37.5
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 2.0e-28 131.3 353 29.5
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 1.7e-27 128.3 455 27.7
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.9e-27 127.5 362 33.1
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 8.4e-27 125.9 246 38.6
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 1.4e-26 125.2 490 26.9
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 3.2e-26 124.0 256 37.1
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 5.4e-26 123.2 250 36.0
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 7.1e-26 122.9 473 26.4
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 1.2e-25 122.1 346 34.1
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 1.6e-25 121.7 247 38.5
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 2.7e-25 120.9 381 30.7
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 5.1e-24 116.7 508 28.1
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 6.6e-24 116.3 483 28.0
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 4.3e-23 113.6 303 33.7
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 5.6e-23 113.2 232 34.1
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 1.2e-22 112.1 275 30.5
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 1.8e-21 108.2 126 50.0
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 3.1e-21 107.5 394 29.4
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.3e-19 102.1 196 35.7
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 2.2e-19 101.3 226 35.8
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 4.9e-19 100.1 228 34.2
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 1.9e-18 98.2 275 32.7
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 2.4e-18 97.8 229 32.8
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 1.2e-17 95.5 94 53.2
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 2.1e-17 94.7 89 52.8
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 2.1e-17 94.7 89 52.8
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 4.6e-17 93.6 239 31.8
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 7.8e-17 92.8 102 49.0
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 1.7e-16 91.7 101 50.5
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 5.1e-16 90.1 316 28.5
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 3.3e-15 87.4 239 35.1
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 3.3e-15 87.4 198 32.8
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 4.3e-15 87.0 246 33.3
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 5.6e-15 86.7 526 24.7
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 3.1e-13 80.9 210 34.8
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 9.0e-13 79.3 322 31.1
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 1.1e-10 72.4 94 42.6
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 3.2e-10 70.9 203 29.6
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 6.0e-09 66.6 220 30.9
AagrBONN_evm.TU.Sc2ySwM_228.932 Anthoceros agrestis HOM05D020562 ORTHO05D009990 1.5e-07 62.0 54 51.9
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 1.6e-06 58.5 416 25.0
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 2.8e-06 57.8 90 37.8


User provided reference genes

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