Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 6.0e-126 454.1 222 100.0
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 4.8e-91 338.2 323 60.1
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 1.8e-61 240.0 233 55.4
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 6.3e-59 231.5 228 52.2
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 2.4e-58 229.6 228 52.6
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 3.1e-58 229.2 215 54.0
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 5.4e-58 228.4 228 51.3
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 2.7e-57 226.1 211 54.5
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 3.5e-57 225.7 228 51.8
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 1.3e-56 223.8 228 50.9
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 2.3e-56 223.0 228 51.8
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 2.9e-56 222.6 216 52.8
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 3.8e-56 222.2 216 52.3
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 5.0e-56 221.9 228 50.0
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 5.0e-56 221.9 222 51.4
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 5.0e-56 221.9 228 52.2
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 8.6e-56 221.1 217 52.5
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 8.6e-56 221.1 228 50.0
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 1.1e-55 220.7 228 50.0
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 4.3e-55 218.8 228 49.1
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 7.3e-55 218.0 216 50.0
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 9.5e-55 217.6 228 49.1
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.2e-54 217.2 228 49.1
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.6e-54 216.9 228 49.6
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.6e-54 216.9 241 47.7
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 1.6e-54 216.9 228 49.1
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 3.6e-54 215.7 228 49.1
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 4.7e-54 215.3 228 50.0
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 6.1e-54 214.9 222 50.0
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 8.0e-54 214.5 228 49.6
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 8.0e-54 214.5 228 50.0
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 1.0e-53 214.2 228 49.6
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 8.9e-53 211.1 228 48.7
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 8.9e-53 211.1 228 48.7
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.2e-52 210.7 213 51.2
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 2.6e-52 209.5 218 52.3
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 4.4e-52 208.8 228 47.8
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 4.4e-52 208.8 228 47.8
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 1.7e-51 206.8 206 54.9
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.7e-51 206.8 228 47.8
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.2e-51 206.5 228 47.8
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 2.2e-51 206.5 234 46.2
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.9e-51 206.1 211 52.1
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 4.9e-51 205.3 216 47.7
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 4.1e-50 202.2 208 51.0
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 5.9e-49 198.4 281 40.9
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 2.3e-48 196.4 215 47.4
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.0e-48 196.1 225 46.2
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.5e-47 193.7 225 45.8
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 2.1e-46 189.9 210 47.6
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 7.5e-44 181.4 215 48.8
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 1.2e-38 164.1 209 41.6
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 2.8e-38 162.9 217 38.7
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 1.3e-35 154.1 208 42.3
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 8.3e-35 151.4 205 44.9
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 1.6e-33 147.1 136 55.1
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 3.5e-33 146.0 208 43.3
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 4.3e-31 139.0 87 70.1
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 9.5e-31 137.9 87 67.8
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 9.5e-31 137.9 147 47.6
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 2.8e-30 136.3 87 67.8
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.3e-29 133.3 202 38.6
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.0e-28 130.2 208 37.5
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.4e-28 129.4 202 38.6
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.2e-27 126.7 198 36.9
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 3.8e-27 125.9 198 37.4
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 8.4e-27 124.8 87 62.1
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 8.4e-27 124.8 87 62.1
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 8.4e-27 124.8 205 39.5
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 1.4e-26 124.0 206 36.4
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 1.2e-25 120.9 208 37.5
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 5.1e-24 115.5 89 64.0
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 1.1e-23 114.4 143 44.8
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 3.3e-23 112.8 159 38.4
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 4.7e-22 109.0 156 41.0
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 4.0e-21 105.9 87 54.0
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 8.9e-21 104.8 122 46.7
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 4.9e-19 99.0 53 86.8
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 2.4e-18 96.7 212 28.3
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 9.3e-18 94.7 206 30.6
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 9.3e-18 94.7 206 30.6
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 1.2e-17 94.4 88 53.4
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 3.5e-17 92.8 206 28.6
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 5.1e-16 89.0 93 47.3
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 7.3e-15 85.1 56 71.4
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 9.0e-13 78.2 80 45.0
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.2e-10 69.7 44 70.5
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 1.5e-07 60.8 37 67.6


User provided reference genes

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