Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 0.0e+00 1120.5 565 100.0
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 3.9e-161 572.4 474 69.6
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 2.6e-109 400.2 589 46.9
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 8.2e-87 325.5 234 72.2
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 1.2e-74 285.0 587 37.8
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 1.5e-51 208.4 235 48.5
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 3.2e-46 190.7 225 47.6
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 5.4e-46 189.9 208 52.9
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 9.2e-46 189.1 226 48.2
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 3.5e-45 187.2 226 46.5
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 4.6e-45 186.8 228 45.2
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 7.8e-45 186.0 226 46.0
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 1.0e-44 185.7 244 47.1
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.3e-44 185.3 244 47.1
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 1.9e-43 181.4 214 47.2
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 1.9e-43 181.4 207 46.9
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 3.3e-43 180.6 229 44.5
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 5.6e-43 179.9 393 33.6
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 9.5e-43 179.1 241 44.8
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 1.6e-42 178.3 233 46.8
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 1.6e-42 178.3 211 48.3
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 2.1e-42 177.9 211 47.4
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.8e-42 177.6 243 44.9
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 4.7e-42 176.8 208 49.5
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 6.2e-42 176.4 220 45.9
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 4.0e-41 173.7 218 46.8
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 5.2e-41 173.3 220 45.9
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 1.2e-40 172.2 202 49.5
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 1.2e-40 172.2 214 46.3
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 9.8e-40 169.1 208 47.6
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 1.3e-39 168.7 199 46.2
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 1.7e-39 168.3 202 45.0
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 2.2e-39 167.9 471 30.6
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 2.2e-39 167.9 226 42.5
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 2.2e-39 167.9 225 44.4
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 3.7e-39 167.2 201 45.3
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 4.9e-39 166.8 227 39.6
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 4.9e-39 166.8 249 41.4
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 6.4e-39 166.4 224 44.2
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 6.4e-39 166.4 197 46.2
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 1.9e-38 164.9 221 45.7
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 4.1e-38 163.7 214 46.3
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 4.1e-38 163.7 215 43.7
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 7.0e-38 162.9 201 47.3
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 1.2e-37 162.2 232 40.9
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 6.0e-37 159.8 216 46.3
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.7e-36 158.3 202 43.6
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 3.0e-36 157.5 205 43.4
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.0e-36 156.8 203 44.8
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.5e-35 155.2 202 43.1
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 1.5e-35 155.2 227 40.5
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 2.5e-35 154.5 237 39.2
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 5.6e-35 153.3 198 47.0
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 7.3e-35 152.9 134 59.7
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 1.2e-34 152.1 565 28.0
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 2.8e-34 151.0 439 28.7
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 8.1e-34 149.4 235 39.1
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 1.4e-33 148.7 200 43.0
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 2.3e-33 147.9 231 38.5
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.0e-33 147.1 278 35.6
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 1.2e-32 145.6 223 39.5
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 1.5e-32 145.2 241 38.2
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 9.9e-32 142.5 219 40.2
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 2.9e-31 141.0 103 68.0
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 3.2e-30 137.5 238 36.6
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 5.4e-30 136.7 237 37.6
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 1.6e-29 135.2 215 36.7
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 1.6e-29 135.2 207 37.7
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 6.0e-29 133.3 220 38.2
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 1.0e-28 132.5 222 36.9
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.0e-28 131.0 233 36.9
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.9e-28 130.6 168 46.4
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 5.6e-27 126.7 222 37.8
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 7.3e-27 126.3 283 33.2
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.2e-26 125.6 210 39.5
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.6e-26 125.2 222 37.4
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 2.8e-26 124.4 199 38.7
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 2.8e-26 124.4 262 34.7
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 3.6e-26 124.0 124 51.6
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 6.8e-25 119.8 209 36.4
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 2.4e-22 111.3 201 33.3
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 7.1e-22 109.8 204 34.3
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 2.5e-19 101.3 97 50.5
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 5.6e-19 100.1 270 29.6
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.2e-18 96.7 97 51.5
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.1e-17 95.9 74 58.1
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-14 85.5 80 50.0
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 3.2e-14 84.3 271 28.8
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 4.2e-14 84.0 95 46.3
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.4e-14 83.6 138 39.9
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 3.5e-13 80.9 121 39.7
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 4.6e-13 80.5 237 27.8
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 6.0e-13 80.1 242 29.3
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.0e-13 80.1 137 37.2
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 7.8e-13 79.7 271 26.2
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.7e-12 78.6 128 37.5
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 3.0e-12 77.8 234 26.1
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.7e-12 76.3 137 36.5
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 1.1e-11 75.9 196 30.1
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 1.1e-11 75.9 121 44.6
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 1.5e-11 75.5 86 44.2
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 1.9e-11 75.1 78 46.2
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 1.9e-11 75.1 78 46.2
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 2.1e-10 71.6 78 44.9
Gohir.D02G103200 Gossypium hirsutum HOM05D005777 ORTHO05D006854 2.1e-10 71.6 132 33.3
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 2.1e-10 71.6 278 26.6
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 2.8e-10 71.2 96 40.6
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 4.8e-10 70.5 121 38.0
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 9.0e-09 66.2 89 42.7
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 2.6e-08 64.7 233 22.7
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.8e-08 63.5 105 38.1
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.9e-07 61.2 116 33.6
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 3.8e-07 60.8 61 47.5
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 6.4e-07 60.1 56 53.6
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 1.1e-06 59.3 84 36.9
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 1.1e-06 59.3 51 52.9
PSO063G6181 Papaver somniferum HOM05D005777 ORTHO05D006854 2.4e-06 58.2 45 53.3
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.3e-06 56.2 50 48.0


User provided reference genes

Program Settings