Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016281 Chenopodium quinoa HOM05D006080 ORTHO05D007382 1.1e-178 630.6 537 100.0
AUR62044025 Chenopodium quinoa HOM05D006080 ORTHO05D007382 1.8e-147 526.9 486 99.8
AUR62003304 Chenopodium quinoa HOM05D006080 ORTHO05D007382 5.4e-112 409.1 486 89.1
Ah.07g204920 Amaranthus hybridus HOM05D002607 ORTHO05D008816 1.5e-82 311.2 484 73.3
Hund19654 Selenicereus undatus HOM05D006080 ORTHO05D007382 3.1e-51 207.2 157 65.0
EL10Ac6g14755 Beta vulgaris HOM05D000249 ORTHO05D000206 2.5e-45 187.6 140 72.1
MSTRG.16549 Avicennia marina HOM05D006080 ORTHO05D007382 1.9e-40 171.4 495 55.4
Rhsim04G0100300 Rhododendron simsii HOM05D006080 ORTHO05D007382 1.6e-39 168.3 492 54.5
CSS0008787 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 4.6e-39 166.8 491 49.7
Lj9C313T10 Lonicera japonica HOM05D006080 ORTHO05D007382 7.9e-39 166.0 490 55.7
vmacro00920 Vaccinium macrocarpon HOM05D006080 ORTHO05D007382 6.7e-38 162.9 492 57.3
Phvul.009G114250 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 4.3e-37 160.2 464 63.6
QL02p058222 Quercus lobata HOM05D006080 ORTHO05D007382 2.8e-36 157.5 151 57.0
QL93p0100_0628 Quercus lobata HOM05D006080 ORTHO05D007382 2.8e-36 157.5 151 57.0
CSS0013189 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 4.8e-36 156.8 491 52.5
CSS0013911 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 4.8e-36 156.8 491 52.5
Sc14g0000540 Simmondsia chinensis HOM05D006080 ORTHO05D007382 1.4e-35 155.2 154 53.2
Glyma.17G049100 Glycine max HOM05D006080 ORTHO05D007382 1.8e-35 154.8 460 66.5
Phvul.011G177400 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 1.8e-35 154.8 464 63.4
Dinv24252 Davidia involucrata HOM05D006080 ORTHO05D007382 6.9e-35 152.9 492 52.0
HanXRQChr05g0146121 Helianthus annuus HOM05D006080 ORTHO05D007382 6.9e-35 152.9 496 56.0
Rhsim12G0001600 Rhododendron simsii HOM05D006080 ORTHO05D007382 1.3e-33 148.7 487 52.8
HanXRQChr10g0292001 Helianthus annuus HOM05D006080 ORTHO05D007382 2.9e-33 147.5 463 59.2
Migut.B00654 Erythranthe guttata HOM05D006080 ORTHO05D007382 4.2e-32 143.7 495 53.9
Lj4g0003679 Lotus japonicus HOM05D006080 ORTHO05D007382 4.2e-32 143.7 461 57.9
MD02G1091700 Malus domestica HOM05D006080 ORTHO05D007382 1.6e-31 141.7 153 48.4
Sc08g0008900 Simmondsia chinensis HOM05D006080 ORTHO05D007382 1.6e-31 141.7 153 48.4
CAN.G1702.1 Capsicum annuum HOM05D006080 ORTHO05D007382 2.1e-31 141.4 499 52.3
PGSC0003DMG401029758 Solanum tuberosum HOM05D006080 ORTHO05D007382 3.6e-31 140.6 495 52.7
CiPaw.03G206100 Carya illinoinensis HOM05D006080 ORTHO05D007382 4.6e-31 140.2 145 52.4
Sopen01g047140 Solanum pennellii HOM05D006080 ORTHO05D007382 4.6e-31 140.2 495 51.7
Actinidia00227 Actinidia chinensis HOM05D006080 ORTHO05D007382 1.0e-30 139.0 433 56.6
Manes.09G158700 Manihot esculenta HOM05D006080 ORTHO05D007382 3.9e-30 137.1 145 47.6
TPR.G30187 Trifolium pratense HOM05D006080 ORTHO05D007382 3.9e-30 137.1 486 56.2
Atru.chr7.1705 Acer truncatum HOM05D006080 ORTHO05D007382 8.8e-30 136.0 143 50.3
Duzib168G1192 Durio zibethinus HOM05D006080 ORTHO05D007382 8.8e-30 136.0 163 43.6
Thecc.09G076600 Theobroma cacao HOM05D006080 ORTHO05D007382 8.8e-30 136.0 163 43.6
MD15G1217800 Malus domestica HOM05D006080 ORTHO05D007382 2.0e-29 134.8 152 47.4
Duzib187G1039 Durio zibethinus HOM05D006080 ORTHO05D007382 4.4e-29 133.7 150 46.0
Prupe.7G198600 Prunus persica HOM05D006080 ORTHO05D007382 7.4e-29 132.9 141 48.2
Sabra06G0110900 Salix brachista HOM05D006080 ORTHO05D007382 7.4e-29 132.9 154 44.2
Gorai.013G224200 Gossypium raimondii HOM05D006080 ORTHO05D007382 9.7e-29 132.5 163 42.9
COL.COLO4_18095 Corchorus olitorius HOM05D006080 ORTHO05D007382 1.3e-28 132.1 154 44.8
Potri.006G141800 Populus trichocarpa HOM05D006080 ORTHO05D007382 1.7e-28 131.7 145 46.9
Ciclev10007804m.g Citrus clementina HOM05D006080 ORTHO05D007382 1.1e-27 129.0 145 48.3
DCAR_029235 Daucus carota HOM05D006080 ORTHO05D007382 1.1e-27 129.0 487 54.4
Nitab4.5_0000249g0340 Nicotiana tabacum HOM05D006080 ORTHO05D007382 1.1e-27 129.0 493 50.1
Solyc01g104630.3 Solanum lycopersicum HOM05D006080 ORTHO05D007382 1.4e-27 128.6 459 54.2
SalBow5G2015 Salvia bowleyana HOM05D006080 ORTHO05D007382 3.1e-27 127.5 463 57.0
MBI19_g16224_MAGBIO Magnolia biondii HOM05D006080 ORTHO05D007382 4.1e-27 127.1 161 42.9
VMungo1215G0155 Vigna mungo HOM05D006080 ORTHO05D007382 6.9e-27 126.3 483 56.1
Oeu000645.1 Olea europaea HOM05D006080 ORTHO05D007382 1.2e-26 125.6 495 51.1
CARHR103620 Cardamine hirsuta HOM05D006080 ORTHO05D007382 1.5e-26 125.2 154 42.9
Cc02_g22120 Coffea canephora HOM05D006080 ORTHO05D007382 2.0e-26 124.8 158 42.4
Gorai.009G035900 Gossypium raimondii HOM05D006080 ORTHO05D007382 2.6e-26 124.4 152 42.1
Gohir.A13G190700 Gossypium hirsutum HOM05D006080 ORTHO05D007382 3.4e-26 124.0 163 40.5
Nitab4.5_0009570g0010 Nicotiana tabacum HOM05D006080 ORTHO05D007382 4.5e-26 123.6 494 49.8
SHI30075 Sapria himalayana HOM05D006080 ORTHO05D007382 4.5e-26 123.6 155 43.2
THA.LOC104808885 Tarenaya hassleriana HOM05D006080 ORTHO05D007382 4.5e-26 123.6 154 44.2
SGA_v2.0_scaffold332G48925 Striga asiatica HOM05D006080 ORTHO05D007382 1.7e-25 121.7 163 41.1
C07p09380 Brassica napus HOM05D006080 ORTHO05D007382 6.5e-25 119.8 154 43.5
BolC7t41361H Brassica oleracea HOM05D006080 ORTHO05D007382 6.5e-25 119.8 154 43.5
Sp3g24500 Schrenkiella parvula HOM05D006080 ORTHO05D007382 8.5e-25 119.4 154 43.5
THA.LOC104815335 Tarenaya hassleriana HOM05D006080 ORTHO05D007382 8.5e-25 119.4 164 40.2
Sed0020593 Sechium edule HOM05D006080 ORTHO05D007382 1.1e-24 119.0 179 40.2
AL3G43560 Arabidopsis lyrata HOM05D006080 ORTHO05D007382 1.4e-24 118.6 154 42.9
AT2G06000 Arabidopsis thaliana HOM05D006080 ORTHO05D007382 1.4e-24 118.6 154 42.9
arahy.Tifrunner.gnm1.ann1.3R1N4J Arachis hypogaea HOM05D006080 ORTHO05D007382 1.4e-24 118.6 152 42.8
BraA07t28425Z Brassica rapa HOM05D006080 ORTHO05D007382 1.4e-24 118.6 154 42.9
Lsat_1_v5_gn_2_12120 Lactuca sativa HOM05D006080 ORTHO05D007382 1.4e-24 118.6 153 43.1
FAN04G2899 Fragaria x ananassa HOM05D006080 ORTHO05D007382 1.9e-24 118.2 137 48.2
Lalb_Chr23g0276361 Lupinus albus HOM05D006080 ORTHO05D007382 1.9e-24 118.2 213 36.2
SalBow5G4726 Salvia bowleyana HOM05D006080 ORTHO05D007382 1.9e-24 118.2 163 42.9
SalBow6G3562 Salvia bowleyana HOM05D006080 ORTHO05D007382 1.9e-24 118.2 495 53.9
arahy.Tifrunner.gnm1.ann1.YW7MJY Arachis hypogaea HOM05D006080 ORTHO05D007382 4.2e-24 117.1 155 40.6
A07p06330 Brassica napus HOM05D006080 ORTHO05D007382 4.2e-24 117.1 154 43.5
BcaB06g26878 Brassica carinata HOM05D006080 ORTHO05D007382 5.5e-24 116.7 154 42.9
Nn7g36733 Nelumbo nucifera HOM05D006080 ORTHO05D007382 7.2e-24 116.3 137 44.5
BcaC06g35949 Brassica carinata HOM05D006080 ORTHO05D007382 9.4e-24 115.9 154 42.9
Thhalv10002477m.g Eutrema salsugineum HOM05D006080 ORTHO05D007382 9.4e-24 115.9 154 42.2
SalBow6G5833 Salvia bowleyana HOM05D006080 ORTHO05D007382 1.2e-23 115.5 496 54.8
Carub.0003s2711 Capsella rubella HOM05D006080 ORTHO05D007382 2.1e-23 114.8 154 42.2
Lalb_Chr07g0181201 Lupinus albus HOM05D006080 ORTHO05D007382 2.1e-23 114.8 135 43.7
PGR142G0728 Punica granatum HOM05D006080 ORTHO05D007382 6.1e-23 113.2 166 40.4
TWI14G1385 Tripterygium wilfordii HOM05D006080 ORTHO05D007382 5.2e-22 110.2 176 37.5
Phvul.009G021500 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 8.8e-22 109.4 148 41.2
Aa31sc481G20 Aethionema arabicum HOM05D006080 ORTHO05D007382 5.7e-21 106.7 167 35.9
CDE06G1744 Ceratophyllum demersum HOM05D000591 ORTHO05D000579 7.4e-21 106.3 156 39.1
CDE02G4345 Ceratophyllum demersum HOM05D006080 ORTHO05D007382 9.7e-21 105.9 177 37.3
Glyma.04G019000 Glycine max HOM05D006080 ORTHO05D007382 1.3e-20 105.5 147 38.1
Psat1g133120 Pisum sativum HOM05D006080 ORTHO05D007382 1.7e-20 105.1 147 39.5
Aqoxy5G04299 Aquilegia oxysepala HOM05D006080 ORTHO05D007382 2.2e-20 104.8 159 39.6
Glyma.06G019300 Glycine max HOM05D006080 ORTHO05D007382 2.8e-20 104.4 147 37.4
Lj6g0017816 Lotus japonicus HOM05D006080 ORTHO05D007382 3.7e-20 104.0 157 35.7
Haze_26015 Corylus avellana HOM05D006080 ORTHO05D007382 4.8e-20 103.6 89 59.6
VMungo1309G1452 Vigna mungo HOM05D006080 ORTHO05D007382 1.4e-19 102.1 148 38.5
Cfa002986 Carpinus fangiana HOM05D006080 ORTHO05D007382 2.4e-19 101.3 89 58.4
TPR.G27762 Trifolium pratense HOM05D006080 ORTHO05D007382 2.4e-19 101.3 147 38.1
ECA238G3807 Erigeron canadensis HOM05D006080 ORTHO05D007382 4.1e-19 100.5 492 49.6
Ca_02204_v3 Cicer arietinum L. HOM05D006080 ORTHO05D007382 7.0e-19 99.8 129 42.6
Medtr2g041700 Medicago truncatula HOM05D006080 ORTHO05D007382 7.0e-19 99.8 160 36.9
Medtr4g040410 Medicago truncatula HOM05D006080 ORTHO05D007382 1.6e-18 98.6 75 61.3
Ca_14668_v3 Cicer arietinum L. HOM05D006080 ORTHO05D007382 1.0e-17 95.9 77 59.7
Peaxi162Scf01290g00029 Petunia axillaris HOM05D006080 ORTHO05D007382 6.5e-17 93.2 437 51.3
Atru.BG.18.p Acer truncatum HOM05D006080 ORTHO05D007382 8.5e-17 92.8 87 54.0
Cpa.g.sc28.32 Carica papaya HOM05D006080 ORTHO05D007382 8.0e-15 86.3 90 47.8
FAN18G2998 Fragaria x ananassa HOM05D006080 ORTHO05D007382 1.0e-14 85.9 84 53.6
FvH4_5g31880 Fragaria vesca HOM05D006080 ORTHO05D007382 1.8e-14 85.1 84 53.6
FAN08G1188 Fragaria x ananassa HOM05D006080 ORTHO05D007382 4.0e-14 84.0 85 52.9
Gohir.D13G196370 Gossypium hirsutum HOM05D006080 ORTHO05D007382 2.6e-13 81.3 98 43.9
CANSAT56G0731 Cannabis sativa HOM05D006080 ORTHO05D007382 4.4e-13 80.5 86 48.8
RcHm_v2.0_Chr7g0227901 Rosa chinensis HOM05D006080 ORTHO05D007382 5.7e-13 80.1 80 51.2
TAR383G0956 Trochodendron aralioides HOM05D006080 ORTHO05D007382 7.5e-13 79.7 83 49.4
Eucgr.C00814 Eucalyptus grandis HOM05D006080 ORTHO05D007382 4.8e-12 77.0 105 36.2
ATR0598G196 Amborella trichopoda HOM05D006080 ORTHO05D007382 8.2e-12 76.3 109 35.8
MELO3C004654.2 Cucumis melo HOM05D006080 ORTHO05D007382 1.4e-11 75.5 110 40.9
CsaV3_2G001150 Cucumis sativus L. HOM05D006080 ORTHO05D007382 2.4e-11 74.7 87 46.0
ClCG11G001430 Citrullus lanatus HOM05D006080 ORTHO05D007382 4.1e-11 73.9 80 48.8
TWI59G0376 Tripterygium wilfordii HOM05D006080 ORTHO05D007382 2.7e-10 71.2 99 38.4
Zm00001eb081680 Zea mays HOM05D006080 ORTHO05D007382 9.4e-08 62.8 141 32.6
Aqoxy3G03779 Aquilegia oxysepala HOM05D006232 ORTHO05D007746 1.8e-06 58.5 131 28.2
Psat7g154760 Pisum sativum HOM05D006080 ORTHO05D007382 2.3e-06 58.2 66 47.0
Nitab4.5_0001677g0020 Nicotiana tabacum HOM05D006232 ORTHO05D007746 4.0e-06 57.4 146 30.8
Zm00001eb423410 Zea mays HOM05D006080 ORTHO05D007382 6.8e-06 56.6 108 30.6


User provided reference genes

Program Settings