Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 3.7e-238 827.8 410 100.0
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 2.7e-204 715.3 409 86.3
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 3.0e-163 578.9 401 70.3
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 5.3e-152 541.6 407 66.8
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 7.1e-149 531.2 462 59.3
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 2.0e-138 496.5 418 58.6
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 1.8e-136 490.0 422 58.1
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 2.6e-135 486.1 420 59.3
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 7.7e-135 484.6 419 58.0
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 1.7e-134 483.4 405 59.0
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 2.9e-134 482.6 448 55.8
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 1.1e-133 480.7 425 57.2
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 2.1e-132 476.5 422 57.8
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 3.6e-132 475.7 409 57.9
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 6.1e-132 474.9 414 56.3
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 7.9e-132 474.6 422 57.3
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 7.9e-132 474.6 421 57.7
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 1.0e-131 474.2 422 57.6
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 1.4e-131 473.8 423 56.7
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 1.8e-131 473.4 432 56.0
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 3.9e-131 472.2 402 60.0
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.5e-130 470.3 397 57.9
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 9.7e-130 467.6 400 57.0
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 9.7e-130 467.6 401 57.4
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.7e-129 466.8 401 57.1
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 2.8e-129 466.1 421 55.3
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 4.8e-129 465.3 400 57.0
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 4.1e-128 462.2 411 57.7
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 5.3e-128 461.8 419 55.8
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 7.0e-128 461.5 427 55.5
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.2e-127 460.7 397 56.7
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 1.2e-127 460.7 404 57.2
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 3.5e-127 459.1 403 58.8
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 2.9e-126 456.1 417 55.2
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 5.0e-126 455.3 427 54.6
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 1.5e-125 453.8 416 54.8
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 3.2e-125 452.6 421 53.9
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.2e-125 452.2 406 57.4
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 7.2e-125 451.4 420 54.0
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 7.2e-125 451.4 410 55.6
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 9.4e-125 451.1 406 57.4
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 9.4e-125 451.1 420 53.6
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 1.6e-124 450.3 426 54.0
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 2.1e-124 449.9 422 53.3
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 2.7e-124 449.5 423 54.8
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 2.7e-124 449.5 434 54.8
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 2.7e-124 449.5 427 53.6
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 2.7e-124 449.5 427 54.1
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 1.8e-123 446.8 407 56.8
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 2.3e-123 446.4 411 53.3
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 5.2e-123 445.3 423 53.7
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 6.7e-123 444.9 417 55.4
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 1.1e-122 444.1 407 54.3
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 1.1e-122 444.1 405 54.3
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 1.1e-122 444.1 353 60.6
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 1.5e-122 443.7 420 52.1
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 4.4e-122 442.2 407 54.1
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 4.4e-122 442.2 425 55.1
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 5.7e-122 441.8 425 54.6
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 9.7e-122 441.0 408 53.9
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 9.7e-122 441.0 415 55.4
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 2.8e-121 439.5 423 51.5
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 2.8e-121 439.5 420 54.3
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 4.8e-121 438.7 407 54.5
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 4.8e-121 438.7 408 53.2
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 6.3e-121 438.3 405 53.6
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 6.3e-121 438.3 415 54.0
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 1.8e-120 436.8 402 55.7
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 1.8e-120 436.8 412 56.6
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 1.6e-119 433.7 410 53.7
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 4.5e-119 432.2 415 51.8
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 2.9e-118 429.5 437 53.5
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 2.9e-118 429.5 405 53.3
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 2.9e-118 429.5 401 55.4
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 3.8e-118 429.1 412 51.9
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 6.5e-118 428.3 401 54.4
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 3.2e-117 426.0 431 52.4
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 5.5e-117 425.2 304 65.8
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 1.2e-116 424.1 417 52.8
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 2.1e-116 423.3 412 51.5
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 8.8e-115 417.9 401 52.1
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 2.6e-114 416.4 430 51.9
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 5.7e-114 415.2 414 51.4
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 4.8e-113 412.1 407 49.9
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 6.3e-113 411.8 402 53.7
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 3.8e-110 402.5 485 47.8
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 2.1e-108 396.7 396 54.3
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 4.0e-107 392.5 401 47.6
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 1.2e-106 391.0 399 48.1
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 2.2e-105 386.7 359 56.0
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.2e-105 386.7 408 52.2
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 3.5e-103 379.4 290 60.7
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 3.5e-103 379.4 427 49.2
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 7.7e-103 378.3 429 48.5
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 4.9e-97 359.0 420 46.9
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 7.8e-95 351.7 429 45.9
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 1.1e-93 347.8 349 54.4
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 8.3e-89 331.6 321 50.5
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 3.5e-87 326.2 418 40.9
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.6e-79 300.8 295 54.9
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 1.4e-67 261.2 423 38.3
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 1.9e-61 240.7 240 52.1
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 5.8e-58 229.2 310 41.0
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 1.3e-54 218.0 148 66.9
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 3.3e-53 213.4 329 39.8
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 5.6e-53 212.6 384 37.2
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 6.2e-52 209.1 342 35.7
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 1.3e-49 201.4 342 34.5
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 2.2e-49 200.7 250 44.8
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 3.2e-48 196.8 140 67.1
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 2.3e-46 190.7 141 62.4
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 3.9e-46 189.9 302 36.8
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 1.7e-41 174.5 211 48.3
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 1.2e-39 168.3 142 53.5
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 1.5e-37 161.4 141 57.4
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.4e-35 154.8 160 51.2
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 1.8e-35 154.5 158 48.7
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 4.6e-31 139.8 302 31.5
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 2.4e-19 100.9 277 24.9
Cre01.g048600 Chlamydomonas reinhardtii HOM05D006228 ORTHO05D007847 4.5e-18 96.7 201 28.9
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 3.6e-15 87.0 109 44.0
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 6.1e-15 86.3 58 65.5
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 2.3e-14 84.3 58 65.5
PRCOL_00002967 Prasinoderma coloniale HOM05D006228 ORTHO05D007847 8.5e-09 65.9 159 25.8


User provided reference genes

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