Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1100G017 Amborella trichopoda HOM05D005557 ORTHO05D006748 8.3e-117 423.7 213 100.0
Atru.chr7.1734 Acer truncatum HOM05D005557 ORTHO05D006748 3.9e-66 255.4 172 75.0
Aqoxy3G00735 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 1.3e-64 250.4 184 66.3
A08p29990 Brassica napus HOM05D005557 ORTHO05D006748 2.2e-64 249.6 179 67.0
Ciclev10009013m.g Citrus clementina HOM05D005557 ORTHO05D006748 2.2e-64 249.6 191 66.5
A06p15270 Brassica napus HOM05D005557 ORTHO05D006748 6.3e-64 248.1 194 63.9
BraA06t24641Z Brassica rapa HOM05D005557 ORTHO05D006748 6.3e-64 248.1 194 63.9
TAR626G1135 Trochodendron aralioides HOM05D005557 ORTHO05D006748 6.3e-64 248.1 183 68.9
BolC5t30454H Brassica oleracea HOM05D005557 ORTHO05D006748 8.2e-64 247.7 197 62.9
Thhalv10008278m.g Eutrema salsugineum HOM05D005557 ORTHO05D006748 2.4e-63 246.1 189 63.5
TAR624G0952 Trochodendron aralioides HOM05D005557 ORTHO05D006748 2.4e-63 246.1 189 66.1
BraA08t34934Z Brassica rapa HOM05D005557 ORTHO05D006748 3.1e-63 245.7 191 63.9
THA.LOC104815688 Tarenaya hassleriana HOM05D005557 ORTHO05D006748 3.1e-63 245.7 178 68.5
BcaC07g38981 Brassica carinata HOM05D005557 ORTHO05D006748 4.1e-63 245.4 176 67.6
Gohir.D06G077200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 4.1e-63 245.4 191 67.5
Cpa.g.sc28.12 Carica papaya HOM05D005557 ORTHO05D006748 5.3e-63 245.0 190 67.4
BolC8t49542H Brassica oleracea HOM05D005557 ORTHO05D006748 9.1e-63 244.2 166 68.7
Dinv42413 Davidia involucrata HOM05D005557 ORTHO05D006748 9.1e-63 244.2 179 67.6
Sp1g17050 Schrenkiella parvula HOM05D005557 ORTHO05D006748 9.1e-63 244.2 177 66.7
C05p17510 Brassica napus HOM05D005557 ORTHO05D006748 1.2e-62 243.8 193 62.7
Gohir.A06G078200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 1.2e-62 243.8 192 66.1
RcHm_v2.0_Chr1g0332351 Rosa chinensis HOM05D005557 ORTHO05D006748 1.5e-62 243.4 167 73.1
TWI32G1325 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 1.5e-62 243.4 179 68.7
GSVIVG01015048001 Vitis vinifera HOM05D005557 ORTHO05D006748 1.5e-62 243.4 170 70.6
AT1G19140 Arabidopsis thaliana HOM05D005557 ORTHO05D006748 2.0e-62 243.0 176 67.0
Cc06_g12460 Coffea canephora HOM05D005557 ORTHO05D006748 2.0e-62 243.0 172 69.8
MD02G1257100 Malus domestica HOM05D005557 ORTHO05D006748 2.6e-62 242.7 170 71.8
AL1G31720 Arabidopsis lyrata HOM05D005557 ORTHO05D006748 3.4e-62 242.3 190 62.6
C08p19230 Brassica napus HOM05D005557 ORTHO05D006748 3.4e-62 242.3 166 68.1
Thecc.08G180200 Theobroma cacao HOM05D005557 ORTHO05D006748 3.4e-62 242.3 199 62.3
BcaB07g31927 Brassica carinata HOM05D005557 ORTHO05D006748 4.5e-62 241.9 195 62.6
ClCG03G014930 Citrullus lanatus HOM05D005557 ORTHO05D006748 4.5e-62 241.9 178 68.0
Hma1.2p1_0169F.1_g074410 Hydrangea macrophylla HOM05D005557 ORTHO05D006748 4.5e-62 241.9 186 66.1
Solyc07g042150.3 Solanum lycopersicum HOM05D005557 ORTHO05D006748 4.5e-62 241.9 178 68.5
BcaC05g25811 Brassica carinata HOM05D005557 ORTHO05D006748 5.9e-62 241.5 190 63.2
Gorai.010G090300 Gossypium raimondii HOM05D005557 ORTHO05D006748 7.7e-62 241.1 199 65.3
CARHR019740 Cardamine hirsuta HOM05D005557 ORTHO05D006748 1.0e-61 240.7 176 65.9
FvH4_7g05500 Fragaria vesca HOM05D005557 ORTHO05D006748 1.0e-61 240.7 193 65.8
Potri.006G139800 Populus trichocarpa HOM05D005557 ORTHO05D006748 1.0e-61 240.7 187 65.8
FAN01G0749 Fragaria x ananassa HOM05D005557 ORTHO05D006748 1.3e-61 240.4 194 66.5
FAN03G2003 Fragaria x ananassa HOM05D005557 ORTHO05D006748 1.3e-61 240.4 194 66.5
FAN10G4084 Fragaria x ananassa HOM05D005557 ORTHO05D006748 1.3e-61 240.4 194 66.5
CiPaw.03G203700 Carya illinoinensis HOM05D005557 ORTHO05D006748 2.2e-61 239.6 177 68.9
MELO3C015535.2 Cucumis melo HOM05D005557 ORTHO05D006748 2.2e-61 239.6 178 66.9
TWI63G1120 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 2.2e-61 239.6 172 69.8
Aa31LG7G3880 Aethionema arabicum HOM05D005557 ORTHO05D006748 2.9e-61 239.2 187 65.2
PGSC0003DMG400016040 Solanum tuberosum HOM05D005557 ORTHO05D006748 2.9e-61 239.2 190 64.2
Cfa002966 Carpinus fangiana HOM05D000173 ORTHO05D006748 3.8e-61 238.8 165 70.9
Nitab4.5_0008784g0050 Nicotiana tabacum HOM05D005557 ORTHO05D006748 3.8e-61 238.8 171 69.0
BcaB03g12934 Brassica carinata HOM05D005557 ORTHO05D006748 5.0e-61 238.4 176 65.9
DCAR_024765 Daucus carota HOM05D005557 ORTHO05D006748 6.5e-61 238.0 185 64.9
Lj7A689T78 Lonicera japonica HOM05D005557 ORTHO05D006748 6.5e-61 238.0 164 70.7
Manes.03G042000 Manihot esculenta HOM05D005557 ORTHO05D006748 6.5e-61 238.0 192 63.5
Prupe.2G075400 Prunus persica HOM05D005557 ORTHO05D006748 6.5e-61 238.0 167 70.7
QL11p001232 Quercus lobata HOM05D005557 ORTHO05D006748 6.5e-61 238.0 210 59.0
Carub.0001s1877 Capsella rubella HOM05D005557 ORTHO05D006748 8.5e-61 237.7 176 66.5
Sopen07g021740 Solanum pennellii HOM05D005557 ORTHO05D006748 1.1e-60 237.3 190 64.2
CANSAT56G2230 Cannabis sativa HOM05D005557 ORTHO05D006748 1.9e-60 236.5 163 69.3
PSO386G0114 Papaver somniferum HOM05D005557 ORTHO05D006748 1.9e-60 236.5 182 67.0
EL10Ac8g19008 Beta vulgaris HOM05D005557 ORTHO05D006748 2.5e-60 236.1 169 68.6
Duzib168G0027 Durio zibethinus HOM05D005557 ORTHO05D006748 3.2e-60 235.7 175 66.9
MD07G1063400 Malus domestica HOM05D005557 ORTHO05D006748 3.2e-60 235.7 170 70.0
CsaV3_1G041220 Cucumis sativus L. HOM05D005557 ORTHO05D006748 4.2e-60 235.3 179 67.0
Sabra06G0109200 Salix brachista HOM05D005557 ORTHO05D006748 4.2e-60 235.3 187 65.2
Sc18g0002770 Simmondsia chinensis HOM05D005557 ORTHO05D006748 4.2e-60 235.3 169 70.4
MSTRG.10500 Avicennia marina HOM05D005557 ORTHO05D006748 5.5e-60 235.0 166 69.9
CDE05G0257 Ceratophyllum demersum HOM05D005557 ORTHO05D006748 7.2e-60 234.6 200 60.0
COL.COLO4_18069 Corchorus olitorius HOM05D005557 ORTHO05D006748 7.2e-60 234.6 149 76.5
Nitab4.5_0000343g0390 Nicotiana tabacum HOM05D005557 ORTHO05D006748 7.2e-60 234.6 183 63.9
Os03g0405100 Oryza sativa ssp. japonica HOM05D005557 ORTHO05D006748 7.2e-60 234.6 165 70.9
SEGI_32471 Sequoiadendron giganteum HOM05D005557 ORTHO05D006748 7.2e-60 234.6 186 62.4
Glyma.13G111700 Glycine max HOM05D005557 ORTHO05D006748 1.2e-59 233.8 166 68.7
Sed0003389 Sechium edule HOM05D005557 ORTHO05D006748 1.2e-59 233.8 166 68.1
CSS0017494 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 2.1e-59 233.0 176 66.5
Eucgr.C00788 Eucalyptus grandis HOM05D005557 ORTHO05D006748 2.1e-59 233.0 164 72.0
Peaxi162Scf00880g00018 Petunia axillaris HOM05D005557 ORTHO05D006748 2.1e-59 233.0 179 65.4
HPP92_013279 Vanilla planifolia HOM05D005557 ORTHO05D006748 2.1e-59 233.0 186 62.4
vmacro17121 Vaccinium macrocarpon HOM05D000173 ORTHO05D006748 2.7e-59 232.6 172 66.9
BcaB03g12932 Brassica carinata HOM05D005557 ORTHO05D006748 4.7e-59 231.9 199 58.8
Migut.J00918 Erythranthe guttata HOM05D005557 ORTHO05D006748 4.7e-59 231.9 192 62.5
Zm00001eb019520 Zea mays HOM05D005557 ORTHO05D006748 4.7e-59 231.9 161 71.4
Glyma.17G048000 Glycine max HOM05D005557 ORTHO05D006748 7.9e-59 231.1 166 68.1
PGR142G2674 Punica granatum HOM05D005557 ORTHO05D006748 7.9e-59 231.1 192 62.5
Actinidia30238 Actinidia chinensis HOM05D005557 ORTHO05D006748 1.4e-58 230.3 166 68.1
CAN.G32.9 Capsicum annuum HOM05D005557 ORTHO05D006748 1.8e-58 229.9 171 66.7
arahy.Tifrunner.gnm1.ann1.568RE3 Arachis hypogaea HOM05D005557 ORTHO05D006748 2.3e-58 229.6 164 68.9
arahy.Tifrunner.gnm1.ann1.C56SYK Arachis hypogaea HOM05D005557 ORTHO05D006748 2.3e-58 229.6 164 68.9
Rhsim05G0005000 Rhododendron simsii HOM05D000173 ORTHO05D006748 3.0e-58 229.2 179 66.5
AUR62028302 Chenopodium quinoa HOM05D005557 ORTHO05D006748 3.9e-58 228.8 164 69.5
SalBow6G3747 Salvia bowleyana HOM05D005557 ORTHO05D006748 5.1e-58 228.4 193 60.6
VMungo1215G1068 Vigna mungo HOM05D005557 ORTHO05D006748 5.1e-58 228.4 166 66.9
Dinv25539 Davidia involucrata HOM05D005557 ORTHO05D006748 6.7e-58 228.0 166 67.5
Aqoxy7G00284 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 8.8e-58 227.6 175 65.7
Lj4g0021187 Lotus japonicus HOM05D005557 ORTHO05D006748 8.8e-58 227.6 177 66.1
Lsat_1_v5_gn_5_139800 Lactuca sativa HOM05D005557 ORTHO05D006748 1.1e-57 227.3 172 65.7
Lalb_Chr07g0181281 Lupinus albus HOM05D005557 ORTHO05D006748 2.0e-57 226.5 200 58.0
Phvul.003G129500 Phaseolus vulgaris HOM05D005557 ORTHO05D006748 2.6e-57 226.1 166 66.9
ECA234G3626 Erigeron canadensis HOM05D005557 ORTHO05D006748 4.4e-57 225.3 178 64.0
Lalb_Chr13g0299361 Lupinus albus HOM05D005557 ORTHO05D006748 4.4e-57 225.3 166 65.1
SGA_v2.0_scaffold31G12665 Striga asiatica HOM05D005557 ORTHO05D006748 1.7e-56 223.4 184 60.9
Duzib187G0437 Durio zibethinus HOM05D005557 ORTHO05D006748 2.2e-56 223.0 176 64.8
Medtr4g125000 Medicago truncatula HOM05D005557 ORTHO05D006748 2.2e-56 223.0 165 66.1
Psat7g057840 Pisum sativum HOM05D005557 ORTHO05D006748 3.7e-56 222.2 167 65.3
FAN10G0153 Fragaria x ananassa HOM05D005557 ORTHO05D006748 1.1e-55 220.7 194 63.4
TPR.G12564 Trifolium pratense HOM05D005557 ORTHO05D006748 1.6e-54 216.9 203 57.6
Pp3c26_10620 Physcomitrium patens HOM05D005557 ORTHO05D006748 7.7e-54 214.5 163 61.3
HanXRQChr12g0354431 Helianthus annuus HOM05D005557 ORTHO05D006748 1.3e-53 213.8 166 63.9
Hund26090 Selenicereus undatus HOM05D005557 ORTHO05D006748 1.3e-53 213.8 146 71.2
Ca_09310_v3 Cicer arietinum L. HOM05D005557 ORTHO05D006748 2.9e-53 212.6 179 61.5
CSS0008332 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 2.1e-51 206.5 176 62.5
Mapoly0016s0081 Marchantia polymorpha HOM05D005557 ORTHO05D006748 8.0e-51 204.5 183 56.3
SGA_v2.0_scaffold296G47553 Striga asiatica HOM05D005557 ORTHO05D006748 4.0e-50 202.2 208 53.4
Actinidia39641 Actinidia chinensis HOM05D005557 ORTHO05D006748 8.8e-50 201.1 174 59.8
CANSAT56G3371 Cannabis sativa HOM05D005557 ORTHO05D006748 1.1e-49 200.7 182 59.3
Haze_26037 Corylus avellana HOM05D000173 ORTHO05D000316 1.1e-49 200.7 197 54.8
SMO364G0522 Selaginella moellendorffii HOM05D005557 ORTHO05D006748 2.6e-49 199.5 167 57.5
unitig_85.g27246 Utricularia gibba HOM05D005557 ORTHO05D006748 2.2e-48 196.4 177 55.9
MBI13_g00696_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 1.5e-44 183.7 125 72.8
CBR_g19881 Chara braunii HOM05D005557 ORTHO05D006748 3.5e-38 162.5 155 52.3
AagrBONN_evm.TU.Sc2ySwM_228.5739 Anthoceros agrestis HOM05D005557 ORTHO05D006748 5.0e-37 158.7 137 56.9
AUR62025296 Chenopodium quinoa HOM05D005557 ORTHO05D006748 2.5e-36 156.4 109 70.6
Thecc.09G074000 Theobroma cacao HOM05D005557 ORTHO05D006748 1.2e-35 154.1 200 48.0
PSO724G0807 Papaver somniferum HOM05D005557 ORTHO05D006748 8.8e-34 147.9 168 52.4
arahy.Tifrunner.gnm1.ann1.D619LQ Arachis hypogaea HOM05D005557 ORTHO05D006748 1.5e-25 120.6 108 57.4
AagrBONN_evm.TU.Sc2ySwM_228.4614 Anthoceros agrestis HOM05D005557 ORTHO05D006748 2.0e-25 120.2 125 50.4
SHI52085 Sapria himalayana HOM05D005557 ORTHO05D006748 1.7e-24 117.1 111 55.0
PRCOL_00004586 Prasinoderma coloniale HOM05D005557 ORTHO05D006748 9.2e-23 111.3 161 38.5
Cre06.g269550 Chlamydomonas reinhardtii HOM05D005557 ORTHO05D006748 1.5e-20 104.0 111 45.0
arahy.Tifrunner.gnm1.ann1.56M64E Arachis hypogaea HOM05D005557 ORTHO05D006748 8.9e-18 94.7 86 58.1
arahy.Tifrunner.gnm1.ann1.WCQ4SR Arachis hypogaea HOM05D005557 ORTHO05D006748 1.3e-16 90.9 58 72.4
arahy.Tifrunner.gnm1.ann1.CV9S7K Arachis hypogaea HOM05D005557 ORTHO05D006748 1.7e-16 90.5 86 55.8
Nn1g06537 Nelumbo nucifera HOM05D005557 ORTHO05D006748 4.9e-16 89.0 67 70.1
MCO02G393 Micromonas commoda HOM05D005557 ORTHO05D006748 7.0e-15 85.1 174 30.5
arahy.Tifrunner.gnm1.ann1.L7J4LP Arachis hypogaea HOM05D005557 ORTHO05D006748 2.7e-14 83.2 57 68.4
arahy.Tifrunner.gnm1.ann1.67TMSF Arachis hypogaea HOM05D005557 ORTHO05D006748 1.6e-11 73.9 43 74.4
Migut.J00920 Erythranthe guttata HOM05D005557 ORTHO05D006748 1.6e-11 73.9 84 48.8
MBI13_g00695_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 2.0e-09 67.0 59 59.3
C09p50170 Brassica napus HOM05D002376 ORTHO05D004654 1.3e-08 64.3 60 58.3
Migut.J00958 Erythranthe guttata HOM05D005557 ORTHO05D006748 1.3e-08 64.3 70 47.1
BraA07t29264Z Brassica rapa HOM05D005557 ORTHO05D027294 1.4e-07 60.8 35 77.1
Lj2g0003057 Lotus japonicus HOM05D005557 ORTHO05D018814 9.2e-07 58.2 47 63.8


User provided reference genes

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