Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 2.1e-222 775.4 388 100.0
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 1.0e-136 490.7 370 64.3
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 1.7e-136 490.0 372 66.4
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 5.6e-135 485.0 372 65.6
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 1.2e-134 483.8 365 65.2
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.1e-134 483.0 373 64.1
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 2.8e-134 482.6 371 64.4
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 3.6e-134 482.3 366 65.8
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 3.1e-133 479.2 356 66.6
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 6.8e-133 478.0 374 63.6
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 3.4e-132 475.7 366 65.3
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 3.4e-132 475.7 365 63.0
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 3.4e-132 475.7 370 64.3
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 5.8e-132 474.9 370 63.8
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 7.5e-132 474.6 366 64.2
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 7.5e-132 474.6 368 64.7
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 9.8e-132 474.2 395 60.5
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 1.3e-131 473.8 370 64.1
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 1.3e-131 473.8 374 63.4
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.3e-131 473.8 368 64.4
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 1.3e-131 473.8 366 63.9
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 1.7e-131 473.4 374 63.6
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 2.2e-131 473.0 377 62.3
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 2.2e-131 473.0 371 63.3
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 2.2e-131 473.0 371 63.9
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 2.2e-131 473.0 371 63.9
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 2.2e-131 473.0 358 65.9
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 2.9e-131 472.6 373 63.3
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 3.7e-131 472.2 378 62.2
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 4.9e-131 471.9 373 64.6
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 4.9e-131 471.9 393 61.3
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 6.4e-131 471.5 374 64.7
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 8.3e-131 471.1 370 62.2
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 1.1e-130 470.7 369 62.9
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 1.1e-130 470.7 366 62.8
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 4.1e-130 468.8 371 64.2
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 4.1e-130 468.8 364 64.0
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 7.0e-130 468.0 364 65.1
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 7.0e-130 468.0 364 65.1
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 9.2e-130 467.6 366 62.6
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 2.0e-129 466.5 369 63.7
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 2.0e-129 466.5 365 62.7
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 2.0e-129 466.5 368 63.3
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 3.5e-129 465.7 368 63.9
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 3.5e-129 465.7 366 62.8
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 4.6e-129 465.3 395 60.3
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 4.6e-129 465.3 360 64.7
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 4.6e-129 465.3 365 63.0
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 7.8e-129 464.5 380 61.8
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 7.8e-129 464.5 368 63.6
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 7.8e-129 464.5 394 60.7
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 1.0e-128 464.2 366 64.2
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 1.3e-128 463.8 393 59.5
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 1.7e-128 463.4 372 62.6
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 2.3e-128 463.0 368 63.6
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 2.3e-128 463.0 371 62.3
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 3.9e-128 462.2 371 63.3
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 6.6e-128 461.5 370 61.9
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 8.6e-128 461.1 407 59.5
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 1.9e-127 459.9 365 61.6
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 4.3e-127 458.8 371 63.6
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 5.6e-127 458.4 357 65.5
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 5.6e-127 458.4 397 58.7
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 7.3e-127 458.0 366 61.5
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 1.2e-126 457.2 366 62.8
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 2.8e-126 456.1 376 59.3
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 2.8e-126 456.1 382 61.3
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 2.8e-126 456.1 378 60.1
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 2.8e-126 456.1 369 61.5
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 3.6e-126 455.7 368 60.3
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 4.7e-126 455.3 382 61.3
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 6.2e-126 454.9 376 61.4
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 8.0e-126 454.5 369 61.8
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 1.4e-125 453.8 371 60.6
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 6.8e-125 451.4 367 60.5
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 8.9e-125 451.1 361 64.0
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 1.2e-124 450.7 359 61.3
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 1.2e-124 450.7 367 61.3
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 2.6e-124 449.5 368 58.7
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 2.6e-124 449.5 370 61.4
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 3.7e-123 445.7 370 61.4
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 4.1e-122 442.2 372 61.6
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 5.4e-122 441.8 368 61.1
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 7.0e-122 441.4 438 53.4
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 1.2e-121 440.7 392 58.2
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 1.6e-121 440.3 370 60.5
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 2.1e-121 439.9 396 57.6
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 6.0e-121 438.3 362 61.3
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 2.3e-120 436.4 374 59.1
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 1.9e-119 433.3 364 62.4
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 2.5e-119 433.0 374 56.7
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 4.3e-119 432.2 370 59.5
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 9.5e-119 431.0 388 55.9
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 9.5e-119 431.0 373 60.6
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 2.1e-118 429.9 344 62.8
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 2.8e-118 429.5 367 58.6
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 8.1e-118 427.9 373 60.3
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 1.8e-117 426.8 373 57.9
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 3.1e-117 426.0 365 60.8
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 7.5e-116 421.4 372 56.7
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.4e-114 417.2 373 55.0
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 9.2e-114 414.5 370 57.0
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 1.6e-113 413.7 384 58.3
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 1.7e-112 410.2 390 56.7
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 4.0e-109 399.1 374 53.2
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 1.4e-106 390.6 355 56.6
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 1.6e-105 387.1 388 54.9
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 2.5e-95 353.2 365 51.8
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 4.3e-95 352.4 367 51.2
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 3.6e-94 349.4 314 58.9
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 2.6e-92 343.2 364 51.4
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 6.4e-91 338.6 311 55.9
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 8.4e-83 311.6 397 44.3
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 1.1e-82 311.2 242 64.5
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.0e-75 288.1 222 64.0
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 4.2e-74 282.7 263 57.4
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 4.5e-68 262.7 392 41.8
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 8.2e-62 241.9 173 65.9
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 8.2e-62 241.9 173 65.9
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 1.2e-52 211.5 386 38.3
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 6.1e-49 199.1 165 60.0
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 3.4e-39 166.8 398 32.4
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 5.0e-35 152.9 123 62.6
Lj7A77T5 Lonicera japonica HOM05D005694 ORTHO05D007402 5.0e-35 152.9 113 62.8
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 8.5e-35 152.1 127 55.9
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 4.0e-32 143.3 141 54.6
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 9.8e-31 138.7 393 31.6
Medtr8g072720 Medicago truncatula HOM05D005694 ORTHO05D007402 8.0e-25 119.0 79 72.2
BcaNung00805 Brassica carinata HOM05D005694 ORTHO05D007402 1.2e-09 68.6 69 50.7
Os01g0594800 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 4.0e-08 63.5 89 48.3
Cfa026332 Carpinus fangiana HOM05D005694 ORTHO05D123404 1.5e-07 61.6 266 24.4
MBI16_g05839_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 4.9e-06 56.6 230 24.3


User provided reference genes

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