Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 1.0e-69 266.5 130 100.0
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 2.3e-24 115.9 110 52.7
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 1.5e-23 113.2 115 50.4
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 1.2e-22 110.2 115 47.0
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 3.6e-22 108.6 115 46.1
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 4.7e-22 108.2 116 47.4
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 1.8e-21 106.3 117 43.6
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 3.1e-21 105.5 96 50.0
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 4.0e-21 105.1 124 42.7
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 6.8e-21 104.4 99 48.5
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 2.6e-20 102.4 105 46.7
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 3.4e-20 102.1 125 40.8
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 4.4e-20 101.7 122 41.8
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 5.8e-20 101.3 128 41.4
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 5.8e-20 101.3 114 43.9
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 7.6e-20 100.9 100 44.0
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 9.9e-20 100.5 111 46.8
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 1.7e-19 99.8 105 47.6
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 2.2e-19 99.4 126 42.1
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 2.2e-19 99.4 114 43.9
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 6.4e-19 97.8 88 51.1
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 1.1e-18 97.1 102 45.1
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 1.1e-18 97.1 65 64.6
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 1.4e-18 96.7 114 40.4
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 1.4e-18 96.7 105 43.8
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 1.9e-18 96.3 100 46.0
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 2.4e-18 95.9 113 42.5
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 2.4e-18 95.9 101 46.5
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 5.4e-18 94.7 123 43.1
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 5.4e-18 94.7 114 43.0
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 7.1e-18 94.4 93 45.2
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 7.1e-18 94.4 112 43.8
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 9.2e-18 94.0 93 45.2
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 1.2e-17 93.6 87 50.6
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 2.1e-17 92.8 109 42.2
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 2.1e-17 92.8 109 41.3
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 2.7e-17 92.4 66 57.6
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 3.5e-17 92.0 68 58.8
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 3.5e-17 92.0 105 44.8
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 6.0e-17 91.3 84 51.2
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 6.0e-17 91.3 84 51.2
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 7.8e-17 90.9 92 45.7
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 1.0e-16 90.5 98 45.9
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 1.0e-16 90.5 86 50.0
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 1.0e-16 90.5 86 50.0
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 1.3e-16 90.1 92 45.7
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 1.3e-16 90.1 92 46.7
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 2.3e-16 89.4 89 47.2
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 2.3e-16 89.4 114 36.8
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 8.7e-16 87.4 96 46.9
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 1.1e-15 87.0 61 52.5
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 1.9e-15 86.3 106 37.7
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 5.6e-15 84.7 78 48.7
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 9.6e-15 84.0 91 46.2
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 9.6e-15 84.0 64 57.8
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 9.6e-15 84.0 116 37.1
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 2.8e-14 82.4 45 71.1
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 3.6e-14 82.0 74 52.7
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 6.2e-14 81.3 63 54.0
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 8.1e-14 80.9 61 54.1
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 1.1e-13 80.5 92 40.2
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 1.1e-13 80.5 66 57.6
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 1.4e-13 80.1 56 57.1
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 1.8e-13 79.7 56 57.1
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 1.8e-13 79.7 56 57.1
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 1.8e-13 79.7 62 54.8
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 1.8e-13 79.7 107 39.3
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 2.4e-13 79.3 63 57.1
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 6.9e-13 77.8 56 55.4
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 1.2e-12 77.0 56 53.6
Cc10_g08650 Coffea canephora HOM05D007718 ORTHO05D009752 1.5e-12 76.6 88 44.3
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 2.6e-12 75.9 65 50.8
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 3.4e-12 75.5 80 45.0
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 7.6e-12 74.3 55 52.7
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 1.3e-11 73.6 52 51.9
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 4.9e-11 71.6 55 58.2
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 6.4e-11 71.2 80 40.0
Psat3g145480 Pisum sativum HOM05D007718 ORTHO05D009752 8.4e-11 70.9 85 42.4
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 1.4e-10 70.1 92 39.1
SalBow7G2847 Salvia bowleyana HOM05D007718 ORTHO05D009752 3.9e-08 62.0 53 54.7
Oeu020544.1 Olea europaea HOM05D007718 ORTHO05D009752 8.7e-08 60.8 78 39.7
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 3.3e-07 58.9 87 37.9
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 2.1e-06 56.2 40 55.0
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 3.6e-06 55.5 39 56.4
BcaC02g08810 Brassica carinata HOM05D007718 ORTHO05D009752 3.6e-06 55.5 33 60.6
VMungo1383G3332 Vigna mungo HOM05D000479 ORTHO05D001285 4.8e-06 55.1 35 65.7


User provided reference genes

Program Settings