Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 2.6e-43 178.3 92 100.0
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 4.4e-30 134.4 78 88.5
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 7.5e-30 133.7 78 88.5
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 7.5e-30 133.7 78 89.7
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 9.7e-30 133.3 78 88.5
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 1.3e-29 132.9 78 88.5
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 1.3e-29 132.9 78 88.5
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 1.3e-29 132.9 78 88.5
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 1.3e-29 132.9 78 88.5
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 1.7e-29 132.5 78 88.5
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 1.7e-29 132.5 78 88.5
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 2.2e-29 132.1 78 87.2
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 2.2e-29 132.1 78 87.2
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 2.2e-29 132.1 78 87.2
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 2.2e-29 132.1 78 87.2
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 2.2e-29 132.1 78 85.9
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 2.8e-29 131.7 78 88.5
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 3.7e-29 131.3 78 85.9
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 4.8e-29 131.0 78 85.9
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 4.8e-29 131.0 78 87.2
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 4.8e-29 131.0 78 87.2
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 4.8e-29 131.0 78 85.9
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 4.8e-29 131.0 78 85.9
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 4.8e-29 131.0 78 85.9
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 4.8e-29 131.0 78 85.9
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 4.8e-29 131.0 78 85.9
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 4.8e-29 131.0 78 85.9
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 4.8e-29 131.0 78 85.9
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 4.8e-29 131.0 78 85.9
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 4.8e-29 131.0 78 85.9
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 6.3e-29 130.6 78 85.9
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 8.2e-29 130.2 78 85.9
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 8.2e-29 130.2 78 85.9
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 8.2e-29 130.2 72 91.7
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 8.2e-29 130.2 78 87.2
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 8.2e-29 130.2 78 87.2
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 1.1e-28 129.8 78 85.9
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 1.1e-28 129.8 78 85.9
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 1.1e-28 129.8 78 85.9
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 1.1e-28 129.8 78 85.9
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 1.1e-28 129.8 78 85.9
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 1.1e-28 129.8 78 85.9
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 1.4e-28 129.4 78 84.6
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 1.8e-28 129.0 78 84.6
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 1.8e-28 129.0 78 84.6
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 2.4e-28 128.6 78 82.1
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 2.4e-28 128.6 78 84.6
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 2.4e-28 128.6 78 83.3
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 2.4e-28 128.6 78 84.6
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 2.4e-28 128.6 78 85.9
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 3.1e-28 128.3 78 83.3
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 3.1e-28 128.3 78 83.3
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 3.1e-28 128.3 78 83.3
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 3.1e-28 128.3 78 83.3
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 3.1e-28 128.3 78 83.3
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 3.1e-28 128.3 78 82.1
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 3.1e-28 128.3 78 83.3
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 3.1e-28 128.3 78 83.3
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 4.1e-28 127.9 78 83.3
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 4.1e-28 127.9 72 88.9
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 4.1e-28 127.9 78 84.6
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 4.1e-28 127.9 78 84.6
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 4.1e-28 127.9 78 84.6
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 9.1e-28 126.7 78 82.1
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 9.1e-28 126.7 78 83.3
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 1.2e-27 126.3 80 85.0
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 1.2e-27 126.3 78 83.3
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 1.6e-27 125.9 72 87.5
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 2.0e-27 125.6 80 83.8
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 2.0e-27 125.6 80 83.8
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 2.7e-27 125.2 72 88.9
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 2.7e-27 125.2 78 80.8
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 3.5e-27 124.8 78 83.3
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 3.5e-27 124.8 74 85.1
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 4.5e-27 124.4 78 79.5
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 5.9e-27 124.0 78 79.5
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 7.7e-27 123.6 79 82.3
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 7.7e-27 123.6 79 82.3
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 7.7e-27 123.6 79 82.3
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 7.7e-27 123.6 79 82.3
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 7.7e-27 123.6 79 82.3
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 8.5e-26 120.2 73 84.9
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 8.5e-26 120.2 82 79.3
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 2.5e-25 118.6 72 81.9
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 3.6e-24 114.8 81 76.5
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 3.0e-23 111.7 78 73.1
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 1.7e-21 105.9 76 76.3
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 4.8e-21 104.4 77 72.7
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 4.8e-21 104.4 77 72.7
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 4.8e-21 104.4 57 89.5
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 1.1e-20 103.2 56 91.1
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 1.8e-20 102.4 78 69.2
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 1.8e-20 102.4 78 69.2
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 1.8e-20 102.4 78 69.2
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 2.4e-20 102.1 56 89.3
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 2.4e-20 102.1 66 77.3
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 3.1e-20 101.7 78 69.2
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 9.1e-20 100.1 68 75.0
Pp3c8_2740 Physcomitrium patens HOM05D007087 ORTHO05D008968 5.9e-19 97.4 67 70.1
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 1.3e-18 96.3 85 62.4
Mapoly0132s0041 Marchantia polymorpha HOM05D007087 ORTHO05D008968 2.9e-18 95.1 66 69.7
AagrBONN_evm.TU.Sc2ySwM_344.2813 Anthoceros agrestis HOM05D007087 ORTHO05D008968 8.5e-18 93.6 66 65.2
SMO144G0170 Selaginella moellendorffii HOM05D007087 ORTHO05D008968 1.4e-15 86.3 69 58.0
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 1.8e-15 85.9 64 71.9
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 2.6e-14 82.0 44 88.6
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 4.9e-13 77.8 81 51.9
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 1.4e-12 76.3 55 76.4
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 1.2e-11 73.2 46 73.9
FAN19G2569 Fragaria x ananassa HOM05D007087 ORTHO05D008968 1.9e-09 65.9 43 76.7
SEGI_40703 Sequoiadendron giganteum HOM05D007087 ORTHO05D008968 6.1e-08 60.8 52 48.1
Nitab4.5_0000465g0080 Nicotiana tabacum HOM05D007087 ORTHO05D008968 2.3e-07 58.9 33 84.8


User provided reference genes

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