Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0789G083 Amborella trichopoda HOM05D003238 ORTHO05D003571 2.1e-45 185.7 116 100.0
TAR624G1148 Trochodendron aralioides HOM05D003238 ORTHO05D003571 9.4e-22 107.1 117 65.8
Aqoxy7G04029 Aquilegia oxysepala HOM05D003238 ORTHO05D003571 9.1e-17 90.5 114 64.0
CSS0012761 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 7.7e-16 87.4 117 59.8
CSS0032672 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 7.7e-16 87.4 117 59.8
vmacro17137 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 3.8e-15 85.1 112 59.8
Potri.006G148000 Populus trichocarpa HOM05D003238 ORTHO05D003571 1.0e-12 77.0 116 56.0
PSO210G2488 Papaver somniferum HOM05D003238 ORTHO05D003571 2.3e-12 75.9 117 55.6
Rhsim05G0017200 Rhododendron simsii HOM05D003238 ORTHO05D003571 4.0e-12 75.1 120 59.2
PSO210G1081 Papaver somniferum HOM05D003238 ORTHO05D003571 5.2e-12 74.7 117 56.4
Haze_25933 Corylus avellana HOM05D003238 ORTHO05D003571 1.2e-11 73.6 92 66.3
Dinv36782 Davidia involucrata HOM05D003238 ORTHO05D003571 1.2e-11 73.6 88 69.3
Eucgr.C00871 Eucalyptus grandis HOM05D003238 ORTHO05D003571 2.6e-11 72.4 103 53.4
Ciclev10009462m.g Citrus clementina HOM05D003238 ORTHO05D003571 4.4e-11 71.6 112 40.2
QL02p062228 Quercus lobata HOM05D003238 ORTHO05D003571 4.4e-11 71.6 87 71.3
Actinidia39103 Actinidia chinensis HOM05D003238 ORTHO05D003571 7.5e-11 70.9 83 69.9
Atru.chr7.1621 Acer truncatum HOM05D003238 ORTHO05D003571 9.8e-11 70.5 120 56.7
Dinv37898 Davidia involucrata HOM05D003238 ORTHO05D003571 9.8e-11 70.5 86 68.6
MBI04_g36912_MAGBIO Magnolia biondii HOM05D003238 ORTHO05D003571 1.3e-10 70.1 70 74.3
HPP92_007657 Vanilla planifolia HOM05D003238 ORTHO05D003571 1.3e-10 70.1 108 51.9
Actinidia39710 Actinidia chinensis HOM05D003238 ORTHO05D003571 2.2e-10 69.3 87 67.8
Cfa003064 Carpinus fangiana HOM05D003238 ORTHO05D003571 6.3e-10 67.8 88 65.9
Cfa003563 Carpinus fangiana HOM05D003238 ORTHO05D003571 6.3e-10 67.8 87 66.7
Hma1.2p1_0169F.1_g074900 Hydrangea macrophylla HOM05D003238 ORTHO05D003571 8.3e-10 67.4 89 67.4
Haze_15983 Corylus avellana HOM05D003238 ORTHO05D003571 1.4e-09 66.6 88 65.9
Lalb_Chr04g0263271 Lupinus albus HOM05D003238 ORTHO05D003571 1.4e-09 66.6 83 65.1
Glyma.08G191200 Glycine max HOM05D003238 ORTHO05D003571 1.8e-09 66.2 83 63.9
Lj3g0007714 Lotus japonicus HOM05D003238 ORTHO05D003571 1.8e-09 66.2 94 58.5
Medtr8g017610 Medicago truncatula HOM05D003238 ORTHO05D003571 2.4e-09 65.9 83 67.5
Nn6g35523 Nelumbo nucifera HOM05D003238 ORTHO05D003571 2.4e-09 65.9 87 65.5
Ciclev10026836m.g Citrus clementina HOM05D003238 ORTHO05D003571 3.1e-09 65.5 87 65.5
Lj4C292G2 Lonicera japonica HOM05D003238 ORTHO05D003571 3.1e-09 65.5 92 59.8
Nitab4.5_0005918g0030 Nicotiana tabacum HOM05D003238 ORTHO05D003571 3.1e-09 65.5 88 67.0
BraA10t43522Z Brassica rapa HOM05D003238 ORTHO05D003571 4.1e-09 65.1 108 34.3
Actinidia25242 Actinidia chinensis HOM05D003238 ORTHO05D003571 5.4e-09 64.7 88 45.5
CiPaw.01G223100 Carya illinoinensis HOM05D003238 ORTHO05D003571 5.4e-09 64.7 86 66.3
MD15G1209800 Malus domestica HOM05D003238 ORTHO05D003571 5.4e-09 64.7 87 64.4
Prupe.7G206700 Prunus persica HOM05D003238 ORTHO05D003571 5.4e-09 64.7 87 67.8
Nitab4.5_0000255g0290 Nicotiana tabacum HOM05D003238 ORTHO05D003571 7.0e-09 64.3 71 73.2
Phvul.010G137200 Phaseolus vulgaris HOM05D003238 ORTHO05D003571 7.0e-09 64.3 97 56.7
Solyc12g008950.2 Solanum lycopersicum HOM05D003238 ORTHO05D003571 9.1e-09 63.9 90 61.1
Glyma.07G008200 Glycine max HOM05D003238 ORTHO05D003571 1.6e-08 63.2 83 61.4
Peaxi162Scf00498g00436 Petunia axillaris HOM05D003238 ORTHO05D003571 1.6e-08 63.2 73 71.2
vmacro23045 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 1.6e-08 63.2 88 71.6
Psat4g187480 Pisum sativum HOM05D003238 ORTHO05D003571 2.0e-08 62.8 87 60.9
CANSAT56G1439 Cannabis sativa HOM05D003238 ORTHO05D003571 2.7e-08 62.4 54 63.0
Sabra06G0117100 Salix brachista HOM05D003238 ORTHO05D003571 3.5e-08 62.0 116 50.0
CDE05G2517 Ceratophyllum demersum HOM05D003238 ORTHO05D003571 4.5e-08 61.6 95 60.0
PGR102G1556 Punica granatum HOM05D003238 ORTHO05D003571 4.5e-08 61.6 78 64.1
THA.LOC109116473 Tarenaya hassleriana HOM05D003238 ORTHO05D003571 4.5e-08 61.6 85 62.4
Ca_23334_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 5.9e-08 61.2 88 59.1
Nitab4.5_0002824g0070 Nicotiana tabacum HOM05D003238 ORTHO05D003571 5.9e-08 61.2 89 62.9
Oeu017609.1 Olea europaea HOM05D003238 ORTHO05D003571 5.9e-08 61.2 87 62.1
MSTRG.6003 Avicennia marina HOM05D003238 ORTHO05D003571 7.7e-08 60.8 89 59.6
QL05p009982 Quercus lobata HOM05D003238 ORTHO05D003571 7.7e-08 60.8 88 64.8
Duzib160G0096 Durio zibethinus HOM05D003238 ORTHO05D003571 1.0e-07 60.5 87 64.4
Gohir.A10G058000 Gossypium hirsutum HOM05D003238 ORTHO05D003571 1.0e-07 60.5 72 69.4
Rhsim08G0235200 Rhododendron simsii HOM05D003238 ORTHO05D003571 1.3e-07 60.1 86 66.3
GSVIVG01015179001 Vitis vinifera HOM05D003238 ORTHO05D003571 1.3e-07 60.1 100 58.0
COL.COLO4_30681 Corchorus olitorius HOM05D003238 ORTHO05D003571 1.7e-07 59.7 87 62.1
Gohir.D07G012200 Gossypium hirsutum HOM05D001717 ORTHO05D007217 1.7e-07 59.7 72 73.6
Gorai.001G012800 Gossypium raimondii HOM05D003238 ORTHO05D003571 1.7e-07 59.7 72 75.0
Sopen12g003880 Solanum pennellii HOM05D003238 ORTHO05D003571 1.7e-07 59.7 103 55.3
COL.COLO4_18181 Corchorus olitorius HOM05D003238 ORTHO05D003571 2.3e-07 59.3 102 52.9
Atru.chr1.3787 Acer truncatum HOM05D003238 ORTHO05D003571 2.9e-07 58.9 85 62.4
Duzib168G0217 Durio zibethinus HOM05D003238 ORTHO05D003571 3.8e-07 58.5 87 64.4
PGSC0003DMG400000275 Solanum tuberosum HOM05D003238 ORTHO05D003571 3.8e-07 58.5 99 55.6
Thecc.09G086100 Theobroma cacao HOM05D003238 ORTHO05D003571 3.8e-07 58.5 80 67.5
TWI32G0644 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 3.8e-07 58.5 103 55.3
Gohir.D10G059800 Gossypium hirsutum HOM05D003238 ORTHO05D003571 5.0e-07 58.2 87 60.9
TWI63G0468 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 5.0e-07 58.2 101 36.6
CARHR065610 Cardamine hirsuta HOM05D003238 ORTHO05D003571 6.6e-07 57.8 56 57.1
Migut.J00580 Erythranthe guttata HOM05D003238 ORTHO05D003571 6.6e-07 57.8 149 30.9
THA.LOC104813494 Tarenaya hassleriana HOM05D003238 ORTHO05D003571 6.6e-07 57.8 158 29.7
arahy.Tifrunner.gnm1.ann1.7T9QNI Arachis hypogaea HOM05D003238 ORTHO05D003571 8.6e-07 57.4 82 56.1
A10p14320 Brassica napus HOM05D003238 ORTHO05D003571 8.6e-07 57.4 155 35.5
Cc04_g01740 Coffea canephora HOM05D003238 ORTHO05D003571 8.6e-07 57.4 70 68.6
FAN23G0786 Fragaria x ananassa HOM05D003238 ORTHO05D003571 8.6e-07 57.4 88 62.5
FAN26G0800 Fragaria x ananassa HOM05D003238 ORTHO05D003571 8.6e-07 57.4 88 59.1
Gorai.011G063800 Gossypium raimondii HOM05D003238 ORTHO05D003571 8.6e-07 57.4 87 60.9
TWI79G0340 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 8.6e-07 57.4 84 63.1
CsaV3_7G034700 Cucumis sativus L. HOM05D003238 ORTHO05D003571 1.1e-06 57.0 87 60.9
Nitab4.5_0009992g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 1.1e-06 57.0 58 56.9
SGA_v2.0_scaffold10G05235 Striga asiatica HOM05D002348 ORTHO05D002512 1.1e-06 57.0 87 59.8
arahy.Tifrunner.gnm1.ann1.HS5001 Arachis hypogaea HOM05D003238 ORTHO05D003571 1.5e-06 56.6 73 63.0
Cpa.g.sc25.72 Carica papaya HOM05D003238 ORTHO05D003571 1.5e-06 56.6 52 63.5
ClCG09G000780 Citrullus lanatus HOM05D003238 ORTHO05D003571 1.5e-06 56.6 92 58.7
MD02G1082200 Malus domestica HOM05D003238 ORTHO05D003571 1.5e-06 56.6 87 57.5
Manes.11G024400 Manihot esculenta HOM05D003238 ORTHO05D003571 1.5e-06 56.6 85 58.8
Cc00_g10140 Coffea canephora HOM05D001135 ORTHO05D001005 1.9e-06 56.2 103 47.6
FvH4_1g07820 Fragaria vesca HOM05D003238 ORTHO05D003571 1.9e-06 56.2 88 59.1
FAN19G2918 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.9e-06 56.2 88 59.1
Manes.16G100500 Manihot esculenta HOM05D003238 ORTHO05D003571 1.9e-06 56.2 72 65.3
TPR.G27679 Trifolium pratense HOM05D003238 ORTHO05D003571 1.9e-06 56.2 82 59.8
BcaC01g06458 Brassica carinata HOM05D003238 ORTHO05D003571 2.5e-06 55.8 157 37.6
BcaC03g14186 Brassica carinata HOM05D003238 ORTHO05D003571 2.5e-06 55.8 112 33.9
C03p15230 Brassica napus HOM05D003238 ORTHO05D003571 2.5e-06 55.8 157 37.6
BolC3t13964H Brassica oleracea HOM05D003238 ORTHO05D003571 2.5e-06 55.8 157 37.6
CiPaw.03G213000 Carya illinoinensis HOM05D003238 ORTHO05D003571 2.5e-06 55.8 85 61.2
HPP92_005498 Vanilla planifolia HOM05D003238 ORTHO05D003571 2.5e-06 55.8 46 58.7
Nitab4.5_0006462g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 3.3e-06 55.5 48 58.3
Sed0015805 Sechium edule HOM05D003238 ORTHO05D003571 3.3e-06 55.5 87 59.8
C02p14700 Brassica napus HOM05D003238 ORTHO05D003571 4.2e-06 55.1 112 33.9
BolC2t07595H Brassica oleracea HOM05D003238 ORTHO05D003571 4.2e-06 55.1 112 33.9
DCAR_026391 Daucus carota HOM05D003238 ORTHO05D003571 4.2e-06 55.1 45 62.2
Sopen06g022220 Solanum pennellii HOM05D003238 ORTHO05D003571 4.2e-06 55.1 79 64.6
Carub.0008s1748 Capsella rubella HOM05D003238 ORTHO05D003571 5.5e-06 54.7 108 48.1
FAN26G1453 Fragaria x ananassa HOM05D003238 ORTHO05D003571 5.5e-06 54.7 88 55.7
Sc15g0000270 Simmondsia chinensis HOM05D003238 ORTHO05D003571 5.5e-06 54.7 85 57.6
PGSC0003DMG400004852 Solanum tuberosum HOM05D003238 ORTHO05D003571 5.5e-06 54.7 71 76.1
Solyc06g062765.1 Solanum lycopersicum HOM05D003238 ORTHO05D003571 7.2e-06 54.3 88 63.6
BcaB08g36028 Brassica carinata HOM05D003238 ORTHO05D003571 9.5e-06 53.9 97 29.9
MELO3C024380.2 Cucumis melo HOM05D003238 ORTHO05D003571 9.5e-06 53.9 88 56.8
FAN28G2679 Fragaria x ananassa HOM05D003238 ORTHO05D003571 9.5e-06 53.9 88 59.1
GSVIVG01016802001 Vitis vinifera HOM05D003238 ORTHO05D003571 9.5e-06 53.9 69 66.7


User provided reference genes

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