Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 3.7e-64 248.1 124 100.0
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 2.6e-54 215.3 116 89.7
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 1.5e-38 162.9 117 71.8
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 2.1e-35 152.5 121 68.6
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 3.6e-35 151.8 124 66.1
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 4.7e-35 151.4 115 67.0
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 1.0e-34 150.2 110 70.0
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 1.8e-34 149.4 123 65.9
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 3.0e-34 148.7 110 66.4
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 3.9e-34 148.3 118 66.9
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 5.1e-34 147.9 121 66.1
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 8.8e-34 147.1 117 64.1
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 1.1e-33 146.7 120 62.5
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.1e-33 146.7 123 65.0
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 1.1e-33 146.7 124 65.3
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 1.5e-33 146.4 113 67.3
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 1.5e-33 146.4 113 67.3
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 2.0e-33 146.0 113 68.1
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 3.3e-33 145.2 112 64.3
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 4.4e-33 144.8 111 66.7
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 5.7e-33 144.4 118 63.6
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 7.4e-33 144.1 123 65.0
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 9.7e-33 143.7 117 65.8
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 9.7e-33 143.7 122 63.1
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 1.3e-32 143.3 120 65.0
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.3e-32 143.3 119 66.4
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.7e-32 142.9 119 64.7
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 2.2e-32 142.5 121 65.3
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 2.2e-32 142.5 117 62.4
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 2.8e-32 142.1 113 68.1
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 4.8e-32 141.4 114 64.9
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 4.8e-32 141.4 118 62.7
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 8.2e-32 140.6 122 65.6
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 8.2e-32 140.6 123 63.4
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 1.1e-31 140.2 115 62.6
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 1.1e-31 140.2 119 63.0
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 1.4e-31 139.8 113 66.4
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 1.8e-31 139.4 120 62.5
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 1.8e-31 139.4 121 62.0
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 1.8e-31 139.4 120 62.5
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 1.8e-31 139.4 120 62.5
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 1.8e-31 139.4 121 62.0
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.8e-31 139.4 110 64.5
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.8e-31 139.4 118 61.9
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 2.4e-31 139.0 118 61.0
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 3.1e-31 138.7 123 62.6
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 4.1e-31 138.3 117 65.0
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 5.3e-31 137.9 118 62.7
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 5.3e-31 137.9 118 62.7
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 5.3e-31 137.9 89 73.0
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 7.0e-31 137.5 118 62.7
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 1.2e-30 136.7 122 63.9
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 1.2e-30 136.7 118 61.0
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.6e-30 136.3 108 65.7
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 1.6e-30 136.3 114 64.0
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 1.6e-30 136.3 110 67.3
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 2.0e-30 136.0 148 52.7
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 2.0e-30 136.0 118 63.6
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 2.6e-30 135.6 113 63.7
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 2.6e-30 135.6 120 60.8
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 2.6e-30 135.6 120 60.0
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 3.5e-30 135.2 116 62.1
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 3.5e-30 135.2 110 66.4
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 5.9e-30 134.4 118 61.9
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 5.9e-30 134.4 118 61.9
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 5.9e-30 134.4 118 60.2
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 1.0e-29 133.7 118 61.0
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 1.0e-29 133.7 113 63.7
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 1.3e-29 133.3 121 62.0
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 1.7e-29 132.9 110 64.5
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 1.7e-29 132.9 109 65.1
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 2.9e-29 132.1 119 60.5
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 5.0e-29 131.3 111 64.0
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 5.0e-29 131.3 113 63.7
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 5.0e-29 131.3 119 58.0
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 6.5e-29 131.0 119 60.5
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 8.5e-29 130.6 110 61.8
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 8.5e-29 130.6 120 59.2
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 8.5e-29 130.6 108 64.8
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 8.5e-29 130.6 118 61.9
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 8.5e-29 130.6 117 58.1
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 1.1e-28 130.2 120 59.2
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 1.1e-28 130.2 113 61.9
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 1.5e-28 129.8 112 64.3
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.9e-28 129.4 121 57.9
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.9e-28 129.4 121 57.9
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.5e-28 129.0 121 57.9
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 2.5e-28 129.0 113 61.9
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 2.5e-28 129.0 118 61.0
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 4.2e-28 128.3 121 59.5
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 5.5e-28 127.9 114 60.5
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 7.2e-28 127.5 121 57.0
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 7.2e-28 127.5 114 61.4
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 9.4e-28 127.1 121 60.3
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 1.2e-27 126.7 100 63.0
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 1.6e-27 126.3 80 71.2
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 1.6e-27 126.3 120 56.7
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 2.1e-27 125.9 121 57.0
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 2.1e-27 125.9 121 59.5
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 3.6e-27 125.2 125 56.0
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 4.7e-27 124.8 121 57.0
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 4.7e-27 124.8 94 69.1
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 6.1e-27 124.4 114 60.5
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 8.0e-27 124.0 120 57.5
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 1.4e-26 123.2 88 67.0
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.4e-26 123.2 115 57.4
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 1.8e-26 122.9 121 57.9
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 3.0e-26 122.1 114 59.6
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 6.7e-26 120.9 116 56.0
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 8.8e-26 120.6 109 62.4
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 1.1e-25 120.2 89 67.4
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 1.1e-25 120.2 61 86.9
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 2.0e-25 119.4 94 66.0
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 5.7e-25 117.9 122 58.2
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 9.7e-25 117.1 122 60.7
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 9.7e-25 117.1 80 71.2
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 1.3e-24 116.7 117 59.8
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 9.1e-23 110.5 60 83.3
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 2.0e-22 109.4 79 64.6
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 2.7e-22 109.0 116 53.4
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 7.7e-22 107.5 58 84.5
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 7.7e-22 107.5 88 65.9
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.0e-21 107.1 114 56.1
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 5.5e-12 74.7 90 47.8
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 9.4e-12 73.9 80 51.2
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 2.1e-11 72.8 42 78.6
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 5.2e-10 68.2 76 47.4
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 5.4e-07 58.2 63 52.4
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 9.2e-07 57.4 74 45.9


User provided reference genes

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