Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0737G001 Amborella trichopoda HOM05D003674 ORTHO05D004226 0.0e+00 1117.8 564 100.0
TAR624G0345 Trochodendron aralioides HOM05D003674 ORTHO05D004226 1.6e-162 577.0 405 70.6
Dinv23635 Davidia involucrata HOM05D003674 ORTHO05D004226 6.4e-156 555.1 412 66.7
HPP92_008135 Vanilla planifolia HOM05D003674 ORTHO05D004226 8.3e-156 554.7 414 66.7
CSS0035927 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 6.6e-153 545.0 391 68.8
GSVIVG01020549001 Vitis vinifera HOM05D003674 ORTHO05D004226 2.5e-152 543.1 406 67.2
CSS0020583 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 9.5e-152 541.2 385 69.1
Thecc.02G180000 Theobroma cacao HOM05D003674 ORTHO05D004226 1.8e-150 537.0 412 64.6
FvH4_6g26210 Fragaria vesca HOM05D003674 ORTHO05D004226 5.2e-150 535.4 408 65.4
RcHm_v2.0_Chr2g0126531 Rosa chinensis HOM05D003674 ORTHO05D004226 5.2e-150 535.4 409 65.3
MBI06_g04180_MAGBIO Magnolia biondii HOM05D003674 ORTHO05D004226 3.4e-149 532.7 387 68.5
RcHm_v2.0_Chr2g0126551 Rosa chinensis HOM05D003674 ORTHO05D004226 1.7e-148 530.4 412 64.1
Aqoxy4G00814 Aquilegia oxysepala HOM05D003674 ORTHO05D004226 1.1e-147 527.7 385 67.8
Ciclev10014388m.g Citrus clementina HOM05D003674 ORTHO05D004226 4.1e-147 525.8 387 67.7
Duzib132G0159 Durio zibethinus HOM05D003674 ORTHO05D004226 1.2e-146 524.2 412 62.4
MD09G1247300 Malus domestica HOM05D003674 ORTHO05D004226 1.2e-146 524.2 416 63.0
Cpa.g.sc848.1 Carica papaya HOM05D003674 ORTHO05D004226 3.5e-146 522.7 405 64.2
Gohir.A03G156500 Gossypium hirsutum HOM05D003674 ORTHO05D004226 6.0e-146 521.9 405 64.0
Actinidia11076 Actinidia chinensis HOM05D003674 ORTHO05D004226 1.7e-145 520.4 386 65.5
Gorai.005G201400 Gossypium raimondii HOM05D003674 ORTHO05D004226 1.7e-145 520.4 405 64.0
ClCG07G002890 Citrullus lanatus HOM05D003674 ORTHO05D004226 3.0e-145 519.6 385 65.2
Cfa014617 Carpinus fangiana HOM05D003674 ORTHO05D004226 8.6e-145 518.1 405 62.7
Actinidia11032 Actinidia chinensis HOM05D003674 ORTHO05D004226 1.1e-144 517.7 382 66.0
CsaV3_7G004450 Cucumis sativus L. HOM05D003674 ORTHO05D004226 1.5e-144 517.3 397 63.5
Eucgr.K01031 Eucalyptus grandis HOM05D003674 ORTHO05D004226 1.5e-144 517.3 406 63.3
Eucgr.K01030 Eucalyptus grandis HOM05D003674 ORTHO05D004226 3.3e-144 516.2 406 63.3
COL.COLO4_30194 Corchorus olitorius HOM05D003674 ORTHO05D004226 4.3e-144 515.8 407 62.4
MELO3C018734.2 Cucumis melo HOM05D003674 ORTHO05D004226 5.6e-144 515.4 385 64.7
HanXRQChr10g0297111 Helianthus annuus HOM05D003674 ORTHO05D004226 2.8e-143 513.1 405 64.2
PGR142G3148 Punica granatum HOM05D003674 ORTHO05D004226 2.8e-143 513.1 412 63.8
Rhsim06G0142000 Rhododendron simsii HOM05D003674 ORTHO05D004226 3.6e-143 512.7 394 63.7
CiPaw.04G126100 Carya illinoinensis HOM05D003674 ORTHO05D004226 8.1e-143 511.5 405 63.0
MD17G1240200 Malus domestica HOM05D003674 ORTHO05D004226 8.1e-143 511.5 394 65.0
arahy.Tifrunner.gnm1.ann1.1DM7TY Arachis hypogaea HOM05D003674 ORTHO05D004226 1.8e-142 510.4 403 60.0
arahy.Tifrunner.gnm1.ann1.1TZ75T Arachis hypogaea HOM05D003674 ORTHO05D004226 1.8e-142 510.4 403 60.0
Cc05_g07170 Coffea canephora HOM05D003674 ORTHO05D004226 2.3e-142 510.0 396 64.1
Potri.013G131100 Populus trichocarpa HOM05D003674 ORTHO05D004226 2.3e-142 510.0 389 64.0
EL10Ac9g20767 Beta vulgaris HOM05D003674 ORTHO05D004226 1.2e-141 507.7 414 61.4
Sabra13G0110800 Salix brachista HOM05D003674 ORTHO05D004226 2.6e-141 506.5 406 60.6
Sc12g0003090 Simmondsia chinensis HOM05D003674 ORTHO05D004226 3.4e-141 506.1 406 63.5
Eucgr.K01029 Eucalyptus grandis HOM05D003674 ORTHO05D004226 7.5e-141 505.0 406 62.3
DCAR_021245 Daucus carota HOM05D003674 ORTHO05D004226 1.3e-140 504.2 385 65.5
ECA234G3736 Erigeron canadensis HOM05D003674 ORTHO05D004226 1.3e-140 504.2 405 63.7
Glyma.12G204400 Glycine max HOM05D003674 ORTHO05D004226 4.9e-140 502.3 383 63.2
VMungo0464G1662 Vigna mungo HOM05D003674 ORTHO05D004226 1.1e-139 501.1 405 61.7
Phvul.004G108300 Phaseolus vulgaris HOM05D003674 ORTHO05D004226 3.2e-139 499.6 405 60.7
Lsat_1_v5_gn_4_66721 Lactuca sativa HOM05D003674 ORTHO05D004226 4.1e-139 499.2 387 64.3
Glyma.13G296900 Glycine max HOM05D003674 ORTHO05D004226 1.2e-138 497.7 405 60.5
QL08p038784 Quercus lobata HOM05D003674 ORTHO05D004226 1.6e-138 497.3 435 58.4
PSO832G0572 Papaver somniferum HOM05D003674 ORTHO05D004226 2.1e-138 496.9 397 62.0
QL08p038841 Quercus lobata HOM05D003674 ORTHO05D004226 2.1e-138 496.9 443 58.2
PSO210G7128 Papaver somniferum HOM05D003674 ORTHO05D004226 4.6e-138 495.7 397 61.7
Nn1g06551 Nelumbo nucifera HOM05D003674 ORTHO05D004226 7.8e-138 495.0 341 71.6
Nitab4.5_0004344g0030 Nicotiana tabacum HOM05D003674 ORTHO05D004226 7.8e-138 495.0 396 63.6
Lalb_Chr22g0356561 Lupinus albus HOM05D003674 ORTHO05D004226 1.0e-137 494.6 403 59.6
FAN05G0320 Fragaria x ananassa HOM05D000230 ORTHO05D000176 3.0e-137 493.0 409 62.6
Peaxi162Scf00132g00119 Petunia axillaris HOM05D003674 ORTHO05D004226 5.1e-137 492.3 393 63.4
Prupe.3G138600 Prunus persica HOM05D003674 ORTHO05D004226 5.1e-137 492.3 369 66.1
CiPaw.03G177300 Carya illinoinensis HOM05D003674 ORTHO05D004226 1.5e-136 490.7 382 63.1
Psat5g272320 Pisum sativum HOM05D003674 ORTHO05D004226 4.3e-136 489.2 405 57.3
Solyc07g053970.3 Solanum lycopersicum HOM05D003674 ORTHO05D004226 5.6e-136 488.8 380 63.9
CAN.G248.4 Capsicum annuum HOM05D003674 ORTHO05D004226 7.3e-136 488.4 411 60.6
Carub.0006s3351 Capsella rubella HOM05D003674 ORTHO05D004226 9.5e-136 488.0 414 59.4
THA.LOC104826033 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 2.1e-135 486.9 414 59.4
Sp6g03570 Schrenkiella parvula HOM05D003674 ORTHO05D004226 2.8e-135 486.5 413 59.8
AUR62037356 Chenopodium quinoa HOM05D003674 ORTHO05D004226 8.1e-135 485.0 431 58.0
AL6G49310 Arabidopsis lyrata HOM05D003674 ORTHO05D004226 1.1e-134 484.6 417 59.2
AT4G03560 Arabidopsis thaliana HOM05D003674 ORTHO05D004226 1.4e-134 484.2 412 59.5
Medtr2g090380 Medicago truncatula HOM05D003674 ORTHO05D004226 1.4e-134 484.2 403 58.6
BcaB01g01906 Brassica carinata HOM05D003674 ORTHO05D004226 5.2e-134 482.3 413 58.8
BolC9t53217H Brassica oleracea HOM05D003674 ORTHO05D004226 5.2e-134 482.3 413 58.6
Os01g0678500 Oryza sativa ssp. japonica HOM05D003674 ORTHO05D004226 6.8e-134 481.9 385 60.8
BcaC04g23961 Brassica carinata HOM05D003674 ORTHO05D004226 1.2e-133 481.1 413 58.6
Lj3g0012901 Lotus japonicus HOM05D003674 ORTHO05D004226 1.2e-133 481.1 382 61.8
Ah.01g004260 Amaranthus hybridus HOM05D003674 ORTHO05D004226 1.5e-133 480.7 425 58.1
CARHR251990 Cardamine hirsuta HOM05D003674 ORTHO05D004226 1.5e-133 480.7 413 58.8
BcaC01g06668 Brassica carinata HOM05D003674 ORTHO05D004226 4.4e-133 479.2 413 59.1
CSS0005418 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 4.4e-133 479.2 385 63.9
SalBow1G0286 Salvia bowleyana HOM05D003674 ORTHO05D004226 1.7e-132 477.2 415 60.0
A03p30360 Brassica napus HOM05D003674 ORTHO05D004226 2.2e-132 476.9 413 58.6
BraA09t35927Z Brassica rapa HOM05D003674 ORTHO05D004226 2.2e-132 476.9 416 58.4
Oeu017490.2 Olea europaea HOM05D003674 ORTHO05D004226 2.2e-132 476.9 482 54.1
BcaB01g02542 Brassica carinata HOM05D003674 ORTHO05D004226 2.9e-132 476.5 413 58.6
SalBow1G3138 Salvia bowleyana HOM05D003674 ORTHO05D004226 3.8e-132 476.1 393 61.8
THA.LOC104801172 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 3.8e-132 476.1 437 57.0
TPR.G6424 Trifolium pratense HOM05D003674 ORTHO05D004226 3.8e-132 476.1 410 56.3
Sed0011332 Sechium edule HOM05D003674 ORTHO05D004226 6.4e-132 475.3 363 63.4
Gohir.D02G179632 Gossypium hirsutum HOM05D003674 ORTHO05D004226 8.4e-132 474.9 405 60.2
DCAR_013010 Daucus carota HOM05D003674 ORTHO05D004226 1.0e-129 468.0 392 59.4
FAN09G3196 Fragaria x ananassa HOM05D000230 ORTHO05D004226 1.3e-129 467.6 347 66.0
Sabra13G0110700 Salix brachista HOM05D003674 ORTHO05D004226 1.3e-129 467.6 517 48.9
QL08p038913 Quercus lobata HOM05D003674 ORTHO05D004226 3.0e-129 466.5 498 50.6
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 8.7e-129 464.9 374 62.0
BolC3t15980H Brassica oleracea HOM05D003674 ORTHO05D004226 1.5e-125 454.1 413 57.1
unitig_749.g13960 Utricularia gibba HOM05D003674 ORTHO05D004226 2.6e-125 453.4 425 56.9
SGA_v2.0_scaffold322G48614 Striga asiatica HOM05D003674 ORTHO05D004226 7.6e-125 451.8 393 60.3
TAR624G0523 Trochodendron aralioides HOM05D003674 ORTHO05D004226 2.9e-124 449.9 341 66.9
Thhalv10029480m.g Eutrema salsugineum HOM05D003674 ORTHO05D004226 4.9e-124 449.1 413 56.4
Pp3c1_6270 Physcomitrium patens HOM05D003674 ORTHO05D004226 8.4e-124 448.4 418 56.7
Pp3c1_6272 Physcomitrium patens HOM05D003674 ORTHO05D004226 8.4e-124 448.4 418 56.7
BraA03t12218Z Brassica rapa HOM05D003674 ORTHO05D004226 1.1e-123 448.0 420 56.2
TWI75G1008 Tripterygium wilfordii HOM05D003674 ORTHO05D004226 1.9e-123 447.2 405 58.8
DCAR_019181 Daucus carota HOM05D003674 ORTHO05D004226 4.2e-123 446.0 403 57.8
C03p36660 Brassica napus HOM05D003674 ORTHO05D004226 9.3e-123 444.9 413 56.2
HanXRQChr06g0179591 Helianthus annuus HOM05D003674 ORTHO05D004226 2.1e-122 443.7 407 56.3
Aa31LG5G2940 Aethionema arabicum HOM05D003674 ORTHO05D004226 3.5e-122 443.0 412 56.3
DCAR_013011 Daucus carota HOM05D003674 ORTHO05D004226 6.6e-121 438.7 401 55.9
Pp3c15_12230 Physcomitrium patens HOM05D003674 ORTHO05D004226 4.3e-120 436.0 424 52.6
AagrBONN_evm.TU.Sc2ySwM_344.5080 Anthoceros agrestis HOM05D003674 ORTHO05D004226 9.6e-120 434.9 385 54.3
PSO675G3793 Papaver somniferum HOM05D003674 ORTHO05D004226 9.6e-120 434.9 413 55.9
Mapoly0002s0274 Marchantia polymorpha HOM05D003674 ORTHO05D004226 2.0e-117 427.2 429 51.0
Hma1.2p1_1937F.1_g308270 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 3.8e-116 422.9 352 61.9
A09p02830 Brassica napus HOM05D000230 ORTHO05D000176 2.3e-113 413.7 400 54.8
Hund01095 Selenicereus undatus HOM05D003674 ORTHO05D004226 1.4e-110 404.4 408 52.0
Haze_13165 Corylus avellana HOM05D003674 ORTHO05D004226 1.6e-103 380.9 279 66.3
CDE06G1319 Ceratophyllum demersum HOM05D003674 ORTHO05D004226 1.0e-100 371.7 282 64.5
AUR62042592 Chenopodium quinoa HOM05D003674 ORTHO05D004226 1.0e-100 371.7 405 51.4
MSTRG.14342 Avicennia marina HOM05D003674 ORTHO05D004226 4.3e-96 356.3 277 64.3
Peaxi162Scf00132g00117 Petunia axillaris HOM05D003674 ORTHO05D004226 3.7e-87 326.6 281 58.0
Nitab4.5_0000512g0020 Nicotiana tabacum HOM05D003674 ORTHO05D004226 2.9e-84 317.0 249 65.5
SHI10407 Sapria himalayana HOM05D003674 ORTHO05D004226 2.9e-84 317.0 276 57.2
Zm00001eb360320 Zea mays HOM05D003674 ORTHO05D004226 2.9e-84 317.0 251 62.9
Migut.H01178 Erythranthe guttata HOM05D003674 ORTHO05D004226 9.1e-78 295.4 224 68.3
FAN02G2237 Fragaria x ananassa HOM05D003674 ORTHO05D004226 2.9e-76 290.4 423 42.3
Manes.13G146400 Manihot esculenta HOM05D003674 ORTHO05D004226 1.2e-74 285.0 191 73.3
Oeu058850.1 Olea europaea HOM05D003674 ORTHO05D004226 6.7e-73 279.3 183 74.9
CAN.G1472.4 Capsicum annuum HOM05D003674 ORTHO05D004226 5.9e-69 266.2 221 58.4
Ca_01498_v3 Cicer arietinum L. HOM05D003674 ORTHO05D004226 1.3e-68 265.0 182 69.2
Oeu017491.1 Olea europaea HOM05D003674 ORTHO05D004226 3.0e-65 253.8 201 63.2
MSTRG.14334 Avicennia marina HOM05D003674 ORTHO05D004226 2.8e-63 247.3 212 59.0
vmacro12304 Vaccinium macrocarpon HOM05D003674 ORTHO05D004226 5.5e-59 233.0 207 55.6
Nitab4.5_0000638g0270 Nicotiana tabacum HOM05D003674 ORTHO05D004226 1.4e-49 201.8 191 55.5
Pp3c3_16950 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.1e-46 192.2 397 31.5
Pp3c14_20770 Physcomitrium patens HOM05D003674 ORTHO05D004226 2.4e-46 191.0 409 31.1
Pp3c1_28370 Physcomitrium patens HOM05D003674 ORTHO05D004226 3.5e-45 187.2 404 31.4
Pp3c2_10230 Physcomitrium patens HOM05D003674 ORTHO05D004226 2.9e-44 184.1 404 31.4
Migut.H01179 Erythranthe guttata HOM05D003674 ORTHO05D004226 2.5e-43 181.0 155 58.1
Hma1.2p1_1836F.1_g304720 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 2.5e-43 181.0 116 77.6
MSTRG.14339 Avicennia marina HOM05D003674 ORTHO05D004226 8.0e-42 176.0 125 70.4
vmacro12305 Vaccinium macrocarpon HOM05D003674 ORTHO05D004226 2.3e-41 174.5 119 72.3
MSTRG.14344 Avicennia marina HOM05D003674 ORTHO05D004226 2.6e-40 171.0 137 59.9
Lsat_1_v5_gn_4_64281 Lactuca sativa HOM05D003674 ORTHO05D004226 5.8e-40 169.9 202 47.5
CBR_g54426 Chara braunii HOM05D003674 ORTHO05D004226 7.5e-40 169.5 382 30.4
Pp3c18_10190 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.3e-39 168.7 371 29.4
Pp3c19_18680 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.3e-39 168.7 387 29.5
Pp3c21_11410 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.3e-39 168.7 371 30.2
Mapoly0062s0036 Marchantia polymorpha HOM05D003674 ORTHO05D004226 1.4e-38 165.2 370 31.1
SEGI_19203 Sequoiadendron giganteum HOM05D003674 ORTHO05D004226 3.5e-37 160.6 137 59.9
PGSC0003DMG400018342 Solanum tuberosum HOM05D003674 ORTHO05D004226 2.3e-36 157.9 155 49.7
Hma1.2p1_1145F.1_g261410 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 1.5e-35 155.2 121 66.1
Nitab4.5_0000512g0010 Nicotiana tabacum HOM05D003674 ORTHO05D004226 4.0e-33 147.1 131 55.0
Mapoly0050s0061 Marchantia polymorpha HOM05D003674 ORTHO05D004226 2.0e-32 144.8 391 26.3
Peaxi162Scf00132g00118 Petunia axillaris HOM05D003674 ORTHO05D004226 2.9e-31 141.0 111 60.4
MSTRG.14340 Avicennia marina HOM05D003674 ORTHO05D004226 4.9e-31 140.2 107 64.5
Hma1.2p1_1836F.1_g304700 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 2.1e-29 134.8 130 53.8
arahy.Tifrunner.gnm1.ann1.Y3H9JV Arachis hypogaea HOM05D003674 ORTHO05D004226 3.0e-28 131.0 113 47.8
Oeu010989.1 Olea europaea HOM05D003674 ORTHO05D004226 6.2e-26 123.2 140 47.9
SHI10406 Sapria himalayana HOM05D003674 ORTHO05D004226 1.2e-24 119.0 80 76.2
TAR624G0173 Trochodendron aralioides HOM05D003674 ORTHO05D004226 1.9e-22 111.7 65 81.5
Haze_13163 Corylus avellana HOM05D003674 ORTHO05D004226 3.3e-19 100.9 92 55.4
Hma1.2p1_1145F.1_g261420 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 8.1e-18 96.3 62 77.4
arahy.Tifrunner.gnm1.ann1.WCYV83 Arachis hypogaea HOM05D003674 ORTHO05D004226 8.4e-15 86.3 64 53.1
Nn1g06550 Nelumbo nucifera HOM05D003674 ORTHO05D004226 6.6e-12 76.6 45 77.8
MSTRG.14333 Avicennia marina HOM05D003674 ORTHO05D004226 3.3e-11 74.3 53 67.9
SHI10401 Sapria himalayana HOM05D003674 ORTHO05D004226 2.4e-09 68.2 63 52.4


User provided reference genes

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