Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 2.6e-172 608.6 305 100.0
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 2.5e-98 362.8 221 79.6
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 5.6e-98 361.7 265 71.3
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 5.2e-96 355.1 268 67.2
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 6.8e-96 354.8 231 74.9
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 1.1e-93 347.4 231 73.2
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 1.1e-93 347.4 231 73.2
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 2.1e-92 343.2 243 70.8
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 2.1e-92 343.2 233 71.7
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 2.7e-92 342.8 233 71.7
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 6.0e-92 341.7 243 70.8
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 3.9e-91 339.0 275 63.6
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 4.3e-90 335.5 272 65.8
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 7.3e-90 334.7 270 65.6
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 9.5e-90 334.3 221 71.9
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 6.2e-89 331.6 267 65.2
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 1.1e-88 330.9 267 63.7
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 1.4e-88 330.5 267 64.4
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 1.8e-88 330.1 220 72.7
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 2.3e-88 329.7 232 71.6
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 3.1e-88 329.3 229 70.7
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 3.1e-88 329.3 272 62.5
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 4.0e-88 328.9 220 72.7
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 5.2e-88 328.6 269 63.9
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 1.2e-87 327.4 221 71.5
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 1.5e-87 327.0 221 71.5
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 1.5e-87 327.0 271 62.4
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 2.0e-87 326.6 247 66.4
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 4.4e-87 325.5 232 70.7
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 4.4e-87 325.5 237 66.2
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 5.8e-87 325.1 232 68.1
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 5.8e-87 325.1 270 64.1
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 7.6e-87 324.7 220 71.4
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 7.6e-87 324.7 220 71.4
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 7.6e-87 324.7 220 71.4
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 2.9e-86 322.8 267 62.9
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 2.9e-86 322.8 231 69.7
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 8.4e-86 321.2 273 63.4
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 1.9e-85 320.1 269 61.7
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 1.9e-85 320.1 269 61.0
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 4.1e-85 318.9 205 74.6
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 7.1e-85 318.2 223 70.4
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 2.1e-84 316.6 224 68.8
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 3.5e-84 315.8 221 69.2
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 4.6e-84 315.5 238 65.5
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 7.8e-84 314.7 228 65.4
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 1.3e-83 313.9 253 63.2
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 1.3e-83 313.9 270 61.5
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 1.1e-82 310.8 221 69.2
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 1.9e-82 310.1 250 64.0
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 2.5e-82 309.7 202 72.3
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 3.3e-82 309.3 202 72.3
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 3.3e-82 309.3 202 72.3
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 3.3e-82 309.3 221 67.9
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 2.1e-81 306.6 202 72.8
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 2.8e-81 306.2 221 67.9
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 4.7e-81 305.4 265 58.1
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 4.7e-81 305.4 221 68.3
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 6.2e-81 305.1 266 59.8
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 6.2e-81 305.1 273 59.7
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 6.2e-81 305.1 198 74.2
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 6.2e-81 305.1 221 67.0
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 8.1e-81 304.7 269 57.6
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 8.1e-81 304.7 221 69.2
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 1.1e-80 304.3 225 65.8
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 1.4e-80 303.9 225 67.1
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 2.4e-80 303.1 266 59.4
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 2.4e-80 303.1 248 63.3
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 3.1e-80 302.8 248 62.9
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 4.0e-80 302.4 269 59.1
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 4.0e-80 302.4 269 59.1
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 5.2e-80 302.0 269 59.5
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 6.9e-80 301.6 265 57.7
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 8.9e-80 301.2 265 57.7
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 1.2e-79 300.8 216 69.4
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 2.6e-79 299.7 268 57.1
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 9.9e-79 297.7 265 57.4
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 1.7e-78 297.0 266 60.5
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 2.9e-78 296.2 270 57.0
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 2.9e-78 296.2 270 57.0
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 3.8e-78 295.8 270 56.7
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 3.8e-78 295.8 270 56.7
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 6.4e-78 295.0 231 61.5
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 1.1e-77 294.3 270 56.7
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 1.9e-77 293.5 225 64.9
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 2.4e-77 293.1 220 66.8
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 2.4e-77 293.1 249 58.2
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 2.7e-76 289.7 276 55.4
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 1.7e-75 287.0 271 56.5
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 8.7e-75 284.6 217 64.5
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 5.6e-74 282.0 267 58.8
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 3.6e-73 279.3 207 67.6
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 6.9e-72 275.0 244 57.8
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 1.5e-71 273.9 247 57.1
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 2.0e-71 273.5 290 53.4
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 1.3e-70 270.8 288 53.5
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 1.6e-68 263.8 186 69.4
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 6.0e-68 261.9 220 59.5
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 2.5e-66 256.5 296 51.0
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 2.1e-65 253.4 163 75.5
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 3.7e-65 252.7 240 57.9
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 1.1e-64 251.1 211 54.5
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 1.7e-62 243.8 206 53.4
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 1.9e-61 240.4 216 54.6
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 9.3e-61 238.0 171 66.7
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 1.3e-59 234.2 207 53.6
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 1.8e-59 233.8 229 52.0
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 9.6e-58 228.0 263 49.0
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 1.8e-56 223.8 203 53.2
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 6.9e-56 221.9 155 68.4
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 4.6e-52 209.1 232 47.4
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 5.1e-51 205.7 250 42.8
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.8e-49 199.9 139 65.5
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 9.3e-45 184.9 113 78.8
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 2.3e-43 180.3 221 49.3
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 1.9e-42 177.2 212 51.4
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 9.7e-42 174.9 172 54.7
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 4.2e-37 159.5 178 45.5
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 4.4e-34 149.4 131 58.8
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 6.5e-30 135.6 109 60.6
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 1.5e-26 124.4 188 38.3
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 9.7e-26 121.7 131 48.9
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 3.1e-24 116.7 75 72.0
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 2.6e-23 113.6 78 62.8
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 2.6e-23 113.6 78 61.5
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 2.2e-22 110.5 78 61.5
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 2.1e-20 104.0 79 60.8
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 4.0e-19 99.8 167 34.7
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 3.1e-16 90.1 87 55.2
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 1.0e-14 85.1 173 31.8
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 1.4e-11 74.7 53 69.8
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 3.0e-11 73.6 101 44.6
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 3.0e-11 73.6 101 44.6
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 3.0e-11 73.6 66 53.0
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 4.0e-11 73.2 101 44.6
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 5.2e-11 72.8 101 44.6
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 8.8e-11 72.0 54 63.0
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 8.8e-11 72.0 101 43.6
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 1.7e-09 67.8 58 60.3
Cre03.g171100 Chlamydomonas reinhardtii HOM05D005617 ORTHO05D006847 8.3e-09 65.5 223 28.7
MCO09G447 Micromonas commoda HOM05D005617 ORTHO05D006847 8.3e-09 65.5 208 28.4
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 2.4e-08 63.9 104 41.3
Phvul.005G084700 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 8.6e-06 55.5 85 41.2


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