Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 7.5e-289 996.5 509 100.0
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 5.1e-96 355.9 466 44.2
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 1.9e-95 354.0 466 44.4
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 9.3e-90 335.1 444 43.7
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 3.0e-88 330.1 465 44.1
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 8.7e-88 328.6 453 41.7
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 3.3e-87 326.6 456 40.4
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 9.7e-87 325.1 461 41.6
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 1.2e-84 318.2 470 39.6
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 2.6e-84 317.0 454 41.2
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 4.5e-84 316.2 445 41.3
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 7.7e-84 315.5 467 39.4
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 1.7e-83 314.3 468 40.6
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 1.4e-82 311.2 465 41.1
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 7.2e-82 308.9 470 41.5
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 2.7e-81 307.0 481 39.7
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 4.6e-81 306.2 463 40.2
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 1.0e-80 305.1 463 39.3
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 3.0e-80 303.5 450 40.4
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 5.1e-80 302.8 456 41.0
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 5.1e-80 302.8 468 40.4
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 6.7e-80 302.4 450 40.0
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 2.5e-79 300.4 453 40.2
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 4.3e-79 299.7 463 38.9
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.3e-78 298.1 469 40.9
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.7e-78 297.7 469 40.3
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 2.8e-78 297.0 407 41.8
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 3.7e-78 296.6 407 41.8
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 8.2e-78 295.4 467 41.1
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.1e-77 295.0 468 40.0
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 3.1e-77 293.5 453 40.6
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 3.4e-76 290.0 451 38.1
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 4.5e-76 289.7 450 38.4
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 5.5e-74 282.7 439 39.0
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 1.6e-73 281.2 486 37.7
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 2.7e-73 280.4 453 37.5
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 3.6e-73 280.0 456 37.7
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 7.9e-73 278.9 457 38.1
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 3.3e-71 273.5 450 39.3
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 4.4e-71 273.1 455 37.1
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 3.1e-69 266.9 450 37.8
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 5.3e-69 266.2 453 36.6
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 2.0e-68 264.2 455 36.9
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 2.9e-67 260.4 449 35.9
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 6.5e-67 259.2 456 36.8
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 1.9e-66 257.7 455 35.8
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 1.9e-66 257.7 501 33.3
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 8.0e-65 252.3 449 35.9
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 1.5e-63 248.1 453 35.8
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 1.5e-63 248.1 453 35.8
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 9.7e-63 245.4 433 36.3
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 9.7e-63 245.4 449 36.7
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 2.8e-62 243.8 439 35.3
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 3.7e-62 243.4 453 34.4
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 8.2e-62 242.3 453 35.1
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 1.4e-61 241.5 453 35.8
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 1.2e-60 238.4 453 34.4
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 6.5e-59 232.6 354 40.7
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.2e-57 228.4 450 35.3
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 8.0e-57 225.7 442 33.3
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 3.0e-56 223.8 430 34.9
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 5.7e-55 219.5 401 36.7
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 1.1e-53 215.3 463 32.4
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 8.0e-49 199.1 252 44.4
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 4.0e-48 196.8 335 36.4
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 2.4e-45 187.6 270 42.2
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 3.5e-44 183.7 369 33.1
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 1.3e-38 165.2 461 28.9
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 4.5e-36 156.8 393 31.0
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 2.9e-35 154.1 258 37.6
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 2.2e-30 137.9 172 41.9
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 1.4e-29 135.2 276 33.7
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 4.1e-29 133.7 320 32.2
CiPaw.04G189400 Carya illinoinensis HOM05D007808 ORTHO05D009895 1.0e-27 129.0 102 61.8
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 6.8e-24 116.3 298 32.2
AagrBONN_evm.TU.Sc2ySwM_117.2846 Anthoceros agrestis HOM05D007808 ORTHO05D009895 1.1e-18 99.0 427 24.6
FAN27G0174 Fragaria x ananassa HOM05D007808 ORTHO05D009895 3.1e-16 90.9 54 68.5
PGSC0003DMG400003825 Solanum tuberosum HOM05D007808 ORTHO05D009895 1.2e-15 89.0 60 63.3
Pp3c1_42330 Physcomitrium patens HOM05D007808 ORTHO05D009895 2.3e-11 74.7 113 36.3
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 3.3e-10 70.9 432 22.7
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 2.6e-07 61.2 46 54.3
Gohir.D11G218200 Gossypium hirsutum HOM05D007808 ORTHO05D009895 5.8e-07 60.1 173 29.5


User provided reference genes

Program Settings