Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 2.7e-187 658.7 373 100.0
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 5.0e-125 451.8 295 79.7
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 5.0e-125 451.8 298 79.2
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 1.1e-124 450.7 316 75.3
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 1.5e-124 450.3 291 80.4
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 5.5e-124 448.4 281 83.3
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 1.2e-123 447.2 273 84.2
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 1.0e-122 444.1 264 87.1
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 1.8e-122 443.4 320 75.0
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 2.3e-122 443.0 291 80.1
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 4.0e-122 442.2 261 85.8
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 5.2e-122 441.8 263 85.6
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 6.8e-122 441.4 261 86.2
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 8.9e-122 441.0 261 85.4
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 1.5e-121 440.3 300 77.7
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 2.0e-121 439.9 273 82.8
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 2.0e-121 439.9 328 73.2
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 2.0e-121 439.9 311 75.2
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 2.0e-121 439.9 306 77.1
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 2.6e-121 439.5 261 86.2
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 5.7e-121 438.3 281 80.8
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 5.7e-121 438.3 291 79.0
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 7.5e-121 438.0 303 75.9
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 7.5e-121 438.0 291 78.7
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 7.5e-121 438.0 273 82.4
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 7.5e-121 438.0 273 82.4
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 7.5e-121 438.0 305 75.4
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 9.8e-121 437.6 291 79.0
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 9.8e-121 437.6 288 78.5
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 1.7e-120 436.8 308 76.9
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 2.8e-120 436.0 306 75.5
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 2.8e-120 436.0 291 78.4
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 3.7e-120 435.6 281 80.1
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 3.7e-120 435.6 291 78.4
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 3.7e-120 435.6 273 82.1
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 3.7e-120 435.6 274 80.7
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 4.9e-120 435.3 310 75.5
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 4.9e-120 435.3 298 76.5
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 8.3e-120 434.5 261 85.4
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 8.3e-120 434.5 319 73.7
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 1.8e-119 433.3 288 77.8
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 1.8e-119 433.3 273 81.7
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 2.4e-119 433.0 261 85.1
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 3.1e-119 432.6 292 77.7
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 5.4e-119 431.8 316 74.1
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 7.0e-119 431.4 273 81.0
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 1.2e-118 430.6 292 77.1
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 2.0e-118 429.9 262 82.8
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 2.7e-118 429.5 294 76.5
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 3.5e-118 429.1 296 75.7
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 3.5e-118 429.1 336 70.8
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 3.5e-118 429.1 292 76.7
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 5.9e-118 428.3 302 76.5
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 1.0e-117 427.6 300 76.3
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 1.3e-117 427.2 298 76.8
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 2.3e-117 426.4 324 69.8
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 2.9e-117 426.0 295 75.3
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 6.6e-117 424.9 273 79.1
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 6.6e-117 424.9 295 76.9
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 6.6e-117 424.9 300 75.3
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 1.1e-116 424.1 275 79.3
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 1.5e-116 423.7 273 78.4
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.5e-116 423.7 273 79.5
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 1.9e-116 423.3 295 74.9
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 3.3e-116 422.5 296 74.7
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 5.6e-116 421.8 275 77.5
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 7.3e-116 421.4 261 83.1
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 1.2e-115 420.6 273 78.8
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 2.1e-115 419.9 273 78.0
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 2.1e-115 419.9 273 78.0
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 2.1e-115 419.9 273 78.0
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 2.1e-115 419.9 273 78.8
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 6.1e-115 418.3 260 80.4
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 1.0e-114 417.5 296 74.3
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 1.0e-114 417.5 296 74.3
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 2.3e-114 416.4 296 74.0
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 4.0e-114 415.6 264 79.9
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 8.9e-114 414.5 266 77.8
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 3.4e-113 412.5 265 79.2
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 8.3e-112 407.9 317 67.8
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 2.7e-110 402.9 294 72.1
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 3.0e-109 399.4 245 85.3
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 3.9e-109 399.1 295 74.2
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 6.6e-109 398.3 264 78.8
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 1.1e-108 397.5 303 71.3
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 1.1e-108 397.5 295 73.9
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 1.9e-108 396.7 257 79.8
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 3.3e-108 396.0 262 79.0
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 1.2e-107 394.0 273 74.4
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 2.1e-107 393.3 295 71.9
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 3.6e-107 392.5 268 73.1
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 3.6e-107 392.5 239 84.9
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 1.4e-106 390.6 265 76.2
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 6.8e-106 388.3 292 70.5
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 8.9e-106 387.9 262 75.2
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 1.2e-105 387.5 267 76.4
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 3.4e-105 386.0 295 70.5
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 5.8e-105 385.2 295 70.2
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 2.9e-104 382.9 272 74.3
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 3.7e-104 382.5 262 74.8
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 8.3e-104 381.3 290 70.3
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 1.4e-103 380.6 271 72.3
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 1.9e-103 380.2 271 73.1
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 2.7e-102 376.3 268 72.8
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 7.8e-102 374.8 291 70.8
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 3.0e-101 372.9 307 65.8
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 8.6e-101 371.3 318 64.2
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 1.9e-100 370.2 250 76.8
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 1.9e-100 370.2 293 67.9
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 2.5e-100 369.8 271 71.6
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 4.3e-100 369.0 317 65.6
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 7.3e-100 368.2 317 65.3
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 9.5e-100 367.9 317 65.3
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 2.1e-99 366.7 317 65.6
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 1.5e-97 360.5 326 64.1
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 2.5e-92 343.2 238 75.2
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 8.1e-91 338.2 273 66.3
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 1.1e-90 337.8 333 60.4
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 3.1e-90 336.3 268 68.3
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 3.8e-88 329.3 317 61.2
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 6.4e-88 328.6 318 57.5
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 7.1e-87 325.1 252 64.7
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 9.3e-79 298.1 176 89.2
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 2.5e-76 290.0 275 55.6
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 6.9e-74 282.0 193 80.8
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 1.6e-62 244.2 198 67.7
unitig_22.g5460 Utricularia gibba HOM05D005591 ORTHO05D007131 3.5e-62 243.0 184 69.6
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 3.2e-55 219.9 159 73.0
CBR_g4089 Chara braunii HOM05D005591 ORTHO05D007131 9.7e-44 181.8 117 72.6
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 1.7e-40 171.0 102 84.3
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 4.8e-35 152.9 102 77.5
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 4.8e-35 152.9 102 77.5
BraA08t34904Z Brassica rapa HOM05D005591 ORTHO05D011946 7.4e-28 129.0 99 63.6
Ca_28569_v3 Cicer arietinum L. HOM05D005591 ORTHO05D149412 2.6e-20 104.0 211 30.8
Actinidia29179 Actinidia chinensis HOM05D005591 ORTHO05D007131 4.4e-20 103.2 60 90.0
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 6.3e-19 99.4 62 80.6
Cc01_g18470 Coffea canephora HOM05D005591 ORTHO05D007131 1.0e-08 65.5 43 65.1


User provided reference genes

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