Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G232 Amborella trichopoda HOM05D001887 ORTHO05D006549 0.0e+00 1221.5 642 100.0
TAR636G0264 Trochodendron aralioides HOM05D001887 ORTHO05D006549 8.7e-226 787.3 630 69.2
MBI04_g38561_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 1.3e-218 763.5 645 66.4
Cfa012332 Carpinus fangiana HOM05D001887 ORTHO05D006549 3.6e-216 755.4 599 67.3
CSS0023599 Camellia sinensis var. sinensis HOM05D001887 ORTHO05D006549 1.4e-215 753.4 636 67.6
vmacro00747 Vaccinium macrocarpon HOM05D001887 ORTHO05D006549 6.9e-215 751.1 609 67.2
Haze_08360 Corylus avellana HOM05D001887 ORTHO05D006549 2.9e-213 745.7 617 65.3
Os03g0100400 Oryza sativa ssp. japonica HOM05D001887 ORTHO05D006549 2.9e-213 745.7 631 64.8
GSVIVG01002051001 Vitis vinifera HOM05D001887 ORTHO05D006549 2.9e-213 745.7 604 68.0
Actinidia02198 Actinidia chinensis HOM05D001887 ORTHO05D006549 2.4e-212 742.7 631 65.1
Aqoxy7G00853 Aquilegia oxysepala HOM05D001887 ORTHO05D006549 7.1e-212 741.1 614 65.5
QL12p008620 Quercus lobata HOM05D001887 ORTHO05D006549 9.3e-212 740.7 602 66.8
Peaxi162Scf00301g00615 Petunia axillaris HOM05D001887 ORTHO05D006549 3.5e-211 738.8 615 66.7
CiPaw.11G072100 Carya illinoinensis HOM05D001887 ORTHO05D006549 4.6e-211 738.4 615 65.2
Rhsim07G0136100 Rhododendron simsii HOM05D001887 ORTHO05D006549 7.9e-211 737.6 590 69.8
Solyc08g077800.4 Solanum lycopersicum HOM05D001887 ORTHO05D006549 1.8e-210 736.5 613 66.1
Sopen08g026310 Solanum pennellii HOM05D001887 ORTHO05D006549 2.5e-209 732.6 610 66.1
Nitab4.5_0004227g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 7.4e-209 731.1 615 65.5
PSO675G3297 Papaver somniferum HOM05D001887 ORTHO05D006549 1.1e-207 727.2 612 65.5
Zm00001eb208390 Zea mays HOM05D001887 ORTHO05D006549 1.4e-207 726.9 607 64.6
Nitab4.5_0003335g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 1.8e-207 726.5 606 65.5
PGSC0003DMG400026214 Solanum tuberosum HOM05D001887 ORTHO05D006549 1.8e-207 726.5 607 65.1
Thecc.03G239300 Theobroma cacao HOM05D001887 ORTHO05D006549 4.0e-207 725.3 607 66.7
Lj8C277T15 Lonicera japonica HOM05D001887 ORTHO05D006549 6.9e-207 724.5 602 67.8
Prupe.5G054900 Prunus persica HOM05D001887 ORTHO05D006549 6.9e-207 724.5 668 61.8
Ciclev10024418m.g Citrus clementina HOM05D001887 ORTHO05D006549 1.2e-206 723.8 618 64.6
Nn1g00744 Nelumbo nucifera HOM05D001887 ORTHO05D006549 2.0e-206 723.0 662 62.8
Cc08_g11250 Coffea canephora HOM05D001887 ORTHO05D006549 3.4e-206 722.2 595 65.0
CAN.G572.14 Capsicum annuum HOM05D001887 ORTHO05D006549 7.6e-206 721.1 607 64.4
MD06G1046600 Malus domestica HOM05D001887 ORTHO05D006549 1.7e-205 719.9 690 60.1
arahy.Tifrunner.gnm1.ann1.B9CQCD Arachis hypogaea HOM05D001887 ORTHO05D006549 2.2e-205 719.5 605 65.1
arahy.Tifrunner.gnm1.ann1.HW9JRE Arachis hypogaea HOM05D001887 ORTHO05D006549 2.2e-205 719.5 605 65.1
VMungo1215G0420 Vigna mungo HOM05D001887 ORTHO05D006549 3.8e-205 718.8 612 65.4
Glyma.11G038500 Glycine max HOM05D001887 ORTHO05D006549 1.4e-204 716.8 619 64.5
Psat2g175720 Pisum sativum HOM05D001887 ORTHO05D006549 2.5e-204 716.1 628 62.4
PGR042G1059 Punica granatum HOM05D001887 ORTHO05D006549 3.2e-204 715.7 613 64.9
Hund14477 Selenicereus undatus HOM05D001887 ORTHO05D006549 3.2e-204 715.7 621 64.1
AUR62007171 Chenopodium quinoa HOM05D001887 ORTHO05D006549 4.2e-204 715.3 623 62.1
Gorai.004G191700 Gossypium raimondii HOM05D001887 ORTHO05D006549 4.2e-204 715.3 603 66.5
CANSAT21G2194 Cannabis sativa HOM05D001887 ORTHO05D006549 9.3e-204 714.1 606 65.8
Medtr5g013480 Medicago truncatula HOM05D001887 ORTHO05D006549 1.6e-203 713.4 623 62.4
Gohir.D08G182700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 3.5e-203 712.2 603 66.3
FvH4_5g20470 Fragaria vesca HOM05D001887 ORTHO05D006549 1.3e-202 710.3 667 60.0
FAN18G1605 Fragaria x ananassa HOM05D001887 ORTHO05D006549 3.0e-202 709.1 663 60.5
RcHm_v2.0_Chr7g0205791 Rosa chinensis HOM05D001887 ORTHO05D006549 3.0e-202 709.1 673 60.2
TWI81G0509 Tripterygium wilfordii HOM05D001887 ORTHO05D006549 3.9e-202 708.8 632 62.5
Eucgr.E00349 Eucalyptus grandis HOM05D001887 ORTHO05D006549 5.1e-202 708.4 610 63.4
Manes.01G089700 Manihot esculenta HOM05D001887 ORTHO05D006549 1.5e-201 706.8 618 65.0
A04p14190 Brassica napus HOM05D001887 ORTHO05D006549 9.6e-201 704.1 602 62.8
Lj2g0012346 Lotus japonicus HOM05D001887 ORTHO05D006549 9.6e-201 704.1 607 63.9
Sed0013079 Sechium edule HOM05D001887 ORTHO05D006549 9.6e-201 704.1 656 60.7
ClCG09G012670 Citrullus lanatus HOM05D001887 ORTHO05D006549 1.6e-200 703.4 664 59.9
CsaV3_3G049790 Cucumis sativus L. HOM05D001887 ORTHO05D006549 2.1e-200 703.0 659 60.4
Thhalv10027633m.g Eutrema salsugineum HOM05D001887 ORTHO05D006549 2.1e-200 703.0 593 63.1
Ah.07g199260 Amaranthus hybridus HOM05D001887 ORTHO05D006549 2.8e-200 702.6 622 62.5
COL.COLO4_06683 Corchorus olitorius HOM05D001887 ORTHO05D006549 2.8e-200 702.6 600 65.5
BraA04t17079Z Brassica rapa HOM05D001887 ORTHO05D006549 4.8e-200 701.8 602 62.6
Lalb_Chr09g0324141 Lupinus albus HOM05D001887 ORTHO05D006549 1.4e-199 700.3 617 63.4
BcaC02g08980 Brassica carinata HOM05D001887 ORTHO05D006549 2.4e-199 699.5 608 62.7
C04p48230 Brassica napus HOM05D001887 ORTHO05D006549 2.4e-199 699.5 608 62.7
BolC4t26415H Brassica oleracea HOM05D001887 ORTHO05D006549 2.4e-199 699.5 608 62.7
Potri.001G150400 Populus trichocarpa HOM05D001887 ORTHO05D006549 6.9e-199 698.0 616 65.3
AL7G48350 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 2.0e-198 696.4 598 63.4
Sp7g00750 Schrenkiella parvula HOM05D001887 ORTHO05D006549 4.5e-198 695.3 603 62.4
BcaB06g27602 Brassica carinata HOM05D001887 ORTHO05D006549 1.0e-197 694.1 602 62.0
MELO3C003338.2 Cucumis melo HOM05D001887 ORTHO05D006549 1.0e-197 694.1 660 58.9
Carub.0007s3432 Capsella rubella HOM05D001887 ORTHO05D006549 1.3e-197 693.7 600 62.3
FAN13G0006 Fragaria x ananassa HOM05D001887 ORTHO05D006549 1.7e-197 693.3 669 60.7
Ca_24613_v3 Cicer arietinum L. HOM05D001887 ORTHO05D006549 2.2e-197 693.0 679 58.5
SpUn0010_0230 Schrenkiella parvula HOM05D001887 ORTHO05D006549 2.2e-197 693.0 600 62.5
CDE02G0676 Ceratophyllum demersum HOM05D001887 ORTHO05D006549 1.1e-196 690.6 617 62.1
THA.LOC104807928 Tarenaya hassleriana HOM05D001887 ORTHO05D006549 4.2e-196 688.7 618 62.3
Phvul.002G001900 Phaseolus vulgaris HOM05D001887 ORTHO05D006549 1.6e-195 686.8 592 64.4
AL7G48280 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 7.9e-195 684.5 596 62.2
AT5G41150 Arabidopsis thaliana HOM05D001887 ORTHO05D006549 1.0e-194 684.1 595 62.2
CARHR213220 Cardamine hirsuta HOM05D001887 ORTHO05D006549 1.8e-194 683.3 599 62.3
HPP92_001389 Vanilla planifolia HOM05D001887 ORTHO05D006549 3.9e-194 682.2 638 57.5
Migut.E01262 Erythranthe guttata HOM05D001887 ORTHO05D006549 6.7e-194 681.4 611 60.7
Migut.E01632 Erythranthe guttata HOM05D001887 ORTHO05D006549 6.7e-194 681.4 611 60.7
HanXRQChr01g0016001 Helianthus annuus HOM05D001887 ORTHO05D006549 1.1e-193 680.6 613 61.3
EL10Ac5g12260 Beta vulgaris HOM05D001887 ORTHO05D006549 1.4e-191 673.7 690 57.2
DCAR_000656 Daucus carota HOM05D001887 ORTHO05D006549 1.5e-190 670.2 627 58.7
Aa31LG9G15130 Aethionema arabicum HOM05D001887 ORTHO05D006549 2.0e-190 669.8 560 63.8
ECA246G2103 Erigeron canadensis HOM05D001887 ORTHO05D006549 2.0e-190 669.8 609 60.6
SGA_v2.0_scaffold6G03161 Striga asiatica HOM05D001887 ORTHO05D006549 1.7e-189 666.8 619 60.1
unitig_699.g19770 Utricularia gibba HOM05D001887 ORTHO05D006549 3.0e-186 656.0 604 60.3
Lsat_1_v5_gn_3_15381 Lactuca sativa HOM05D001887 ORTHO05D006549 6.7e-186 654.8 645 58.1
SEGI_01687 Sequoiadendron giganteum HOM05D001887 ORTHO05D006549 3.7e-184 649.0 552 65.9
Duzib205G1274 Durio zibethinus HOM05D001887 ORTHO05D006549 1.4e-183 647.1 608 60.9
AUR62018833 Chenopodium quinoa HOM05D001887 ORTHO05D006549 2.9e-181 639.4 620 57.9
Sabra01G0120200 Salix brachista HOM05D001887 ORTHO05D006549 8.2e-176 621.3 544 64.7
Mapoly0007s0092 Marchantia polymorpha HOM05D001887 ORTHO05D006549 2.4e-175 619.8 654 55.0
AagrBONN_evm.TU.Sc2ySwM_344.3532 Anthoceros agrestis HOM05D001887 ORTHO05D006549 1.3e-168 597.4 610 55.7
SMO118G0017 Selaginella moellendorffii HOM05D001887 ORTHO05D006549 1.2e-166 590.9 616 55.8
Gohir.A08G162700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 1.9e-164 583.6 533 63.4
Pp3c18_11670 Physcomitrium patens HOM05D001887 ORTHO05D006549 4.8e-160 568.9 633 53.4
Dinv25138 Davidia involucrata HOM05D001887 ORTHO05D006549 8.3e-144 515.0 488 60.9
Hma1.2p1_3159F.1_g333410 Hydrangea macrophylla HOM05D001887 ORTHO05D006549 3.3e-140 503.1 595 51.3
MSTRG.13777 Avicennia marina HOM05D001887 ORTHO05D006549 1.9e-135 487.3 614 48.7
CBR_g39228 Chara braunii HOM05D001887 ORTHO05D006549 3.5e-134 483.0 360 66.7
Oeu028057.3 Olea europaea HOM05D001887 ORTHO05D006549 1.0e-125 454.9 599 48.7
HPP92_012638 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.5e-124 451.1 305 72.8
Cpa.g.c28699.1 Carica papaya HOM05D001887 ORTHO05D006549 2.7e-118 430.3 258 83.3
TPR.G31432 Trifolium pratense HOM05D001887 ORTHO05D006549 1.3e-112 411.4 273 76.9
SalBow1G0188 Salvia bowleyana HOM05D001887 ORTHO05D006549 2.9e-112 410.2 270 76.3
MBI04_g36289_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 7.8e-110 402.1 582 44.8
Sc01g0007960 Simmondsia chinensis HOM05D001887 ORTHO05D006549 5.1e-85 319.7 399 47.9
MCO16G346 Micromonas commoda HOM05D001887 ORTHO05D006549 6.9e-82 309.3 602 33.1
Cre06.g311400 Chlamydomonas reinhardtii HOM05D001887 ORTHO05D006549 5.0e-80 303.1 432 42.4
SalBow1G4075 Salvia bowleyana HOM05D001887 ORTHO05D006549 1.3e-72 278.5 358 47.8
GSVIVG01002647001 Vitis vinifera HOM05D001887 ORTHO05D006549 6.5e-64 249.6 141 88.7
Cfa026920 Carpinus fangiana HOM05D001887 ORTHO05D006549 1.1e-63 248.8 599 31.2
PRCOL_00000830 Prasinoderma coloniale HOM05D001887 ORTHO05D006549 3.3e-60 237.3 381 38.8
HPP92_000025 Vanilla planifolia HOM05D001887 ORTHO05D006549 3.8e-56 223.8 140 77.1
Atru.chr9.1202 Acer truncatum HOM05D001887 ORTHO05D006549 5.2e-53 213.4 144 77.8
HPP92_028027 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.8e-50 204.9 130 76.2
HPP92_002782 Vanilla planifolia HOM05D001887 ORTHO05D006549 8.5e-48 196.1 130 73.1
Glyma.01G204533 Glycine max HOM05D001887 ORTHO05D006549 1.2e-46 192.2 105 89.5
HPP92_028028 Vanilla planifolia HOM05D001887 ORTHO05D006549 5.7e-44 183.3 131 70.2
Sed0025805 Sechium edule HOM05D001887 ORTHO05D006549 2.7e-41 174.5 210 51.0
Atru.chr9.1203 Acer truncatum HOM05D001887 ORTHO05D006549 6.6e-40 169.9 96 87.5
Atru.chr9.1201 Acer truncatum HOM05D001887 ORTHO05D006549 4.2e-39 167.2 180 52.2
MD04G1054800 Malus domestica HOM05D001887 ORTHO05D006549 2.6e-36 157.9 122 67.2
HPP92_013056 Vanilla planifolia HOM05D001887 ORTHO05D006549 2.8e-30 137.9 142 47.2
AagrBONN_evm.TU.Sc2ySwM_362.220 Anthoceros agrestis HOM05D001887 ORTHO05D006549 8.9e-29 132.9 86 69.8
TPR.G31429 Trifolium pratense HOM05D001887 ORTHO05D006549 1.2e-17 95.9 226 35.0
AagrBONN_evm.TU.Sc2ySwM_362.221 Anthoceros agrestis HOM05D001887 ORTHO05D070959 5.6e-07 60.5 59 50.8


User provided reference genes

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