Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G545 Amborella trichopoda HOM05D008810 ORTHO05D010971 5.3e-136 489.6 904 100.0
Nn1g08193 Nelumbo nucifera HOM05D008810 ORTHO05D010971 3.6e-44 184.5 255 47.5
vmacro02795 Vaccinium macrocarpon HOM05D008810 ORTHO05D010971 1.6e-39 169.1 226 42.5
Lj2P1121T65 Lonicera japonica HOM05D008810 ORTHO05D010971 2.7e-39 168.3 224 41.1
MD10G1157300 Malus domestica HOM05D008810 ORTHO05D010971 4.6e-39 167.5 231 43.7
Ciclev10018778m.g Citrus clementina HOM05D008810 ORTHO05D010971 6.0e-39 167.2 241 39.8
Cpa.g.sc8.119 Carica papaya HOM05D008810 ORTHO05D010971 1.3e-38 166.0 223 43.0
Prupe.8G196100 Prunus persica HOM05D008810 ORTHO05D010971 1.3e-38 166.0 226 43.4
TWI75G1111 Tripterygium wilfordii HOM05D008810 ORTHO05D010971 1.7e-38 165.6 228 40.8
Thecc.01G216300 Theobroma cacao HOM05D008810 ORTHO05D010971 7.3e-37 160.2 221 42.1
GSVIVG01005921001 Vitis vinifera HOM05D008810 ORTHO05D010971 7.3e-37 160.2 220 40.9
Gohir.D07G165100 Gossypium hirsutum HOM05D008810 ORTHO05D010971 1.6e-36 159.1 236 39.0
MBI11_g07406_MAGBIO Magnolia biondii HOM05D008810 ORTHO05D010971 4.0e-35 154.5 166 49.4
Gorai.001G188700 Gossypium raimondii HOM05D008810 ORTHO05D010971 6.8e-35 153.7 236 37.7
Rhsim13G0050100 Rhododendron simsii HOM05D008810 ORTHO05D010971 8.9e-35 153.3 227 51.5
Lsat_1_v5_gn_9_17361 Lactuca sativa HOM05D008810 ORTHO05D010971 1.5e-34 152.5 220 40.0
Duzib138G0800 Durio zibethinus HOM05D008810 ORTHO05D010971 2.0e-34 152.1 221 40.7
Migut.N00641 Erythranthe guttata HOM05D008810 ORTHO05D010971 1.3e-33 149.4 233 39.5
AL3G18590 Arabidopsis lyrata HOM05D008810 ORTHO05D010971 3.8e-33 147.9 226 39.4
THA.LOC104802656 Tarenaya hassleriana HOM05D008810 ORTHO05D010971 8.4e-33 146.7 233 38.2
CARHR081940 Cardamine hirsuta HOM05D008810 ORTHO05D010971 1.9e-32 145.6 226 39.8
Sp3g06240 Schrenkiella parvula HOM05D008810 ORTHO05D010971 3.2e-32 144.8 226 38.9
AT3G07290 Arabidopsis thaliana HOM05D008810 ORTHO05D010971 9.2e-32 143.3 226 38.9
Aqoxy2G03931 Aquilegia oxysepala HOM05D008810 ORTHO05D010971 1.2e-31 142.9 264 43.2
BolC1t05560H Brassica oleracea HOM05D008810 ORTHO05D010971 6.0e-31 140.6 223 38.6
BraA01t04388Z Brassica rapa HOM05D008810 ORTHO05D010971 3.0e-30 138.3 226 38.5
BNapus_Darmor_BZH_scaffold_109p00140 Brassica napus HOM05D008810 ORTHO05D010971 8.7e-30 136.7 226 38.1
Aa31LG5G17860 Aethionema arabicum HOM05D008810 ORTHO05D010971 7.3e-29 133.7 236 35.6
BcaB04g21297 Brassica carinata HOM05D008810 ORTHO05D010971 2.1e-28 132.1 220 36.4
HanXRQChr08g0232341 Helianthus annuus HOM05D008810 ORTHO05D010971 6.2e-28 130.6 232 39.7
SGA_v2.0_scaffold77G25274 Striga asiatica HOM05D008810 ORTHO05D010971 9.9e-26 123.2 223 35.9
Carub.0003s0683 Capsella rubella HOM05D008810 ORTHO05D010971 5.6e-21 107.5 158 38.6
SEGI_11288 Sequoiadendron giganteum HOM05D003210 ORTHO05D000001 2.1e-20 105.5 160 38.8
MSTRG.12764 Avicennia marina HOM05D008810 ORTHO05D010971 2.8e-20 105.1 141 42.6
Lalb_Chr19g0125341 Lupinus albus HOM05D003210 ORTHO05D000001 3.1e-19 101.7 272 28.3
ClCG02G002730 Citrullus lanatus HOM05D003210 ORTHO05D000001 4.0e-19 101.3 223 29.1
Nn1g03235 Nelumbo nucifera HOM05D003210 ORTHO05D000001 1.1e-16 93.2 156 33.3
TAR381G0732 Trochodendron aralioides HOM05D003210 ORTHO05D000001 1.4e-16 92.8 166 33.1
ATR0712G112 Amborella trichopoda HOM05D003210 ORTHO05D000001 5.4e-16 90.9 211 28.9
ATR0665G178 Amborella trichopoda HOM05D003210 ORTHO05D000001 4.6e-15 87.8 155 36.1
TAR625G1193 Trochodendron aralioides HOM05D003210 ORTHO05D000001 7.9e-15 87.0 218 29.4
TAR629G0622 Trochodendron aralioides HOM05D003210 ORTHO05D000001 1.0e-14 86.7 154 33.8
ClCG08G009320 Citrullus lanatus HOM05D003210 ORTHO05D000001 1.5e-13 82.8 200 27.0
MBI16_g31256_MAGBIO Magnolia biondii HOM05D003210 ORTHO05D000001 2.5e-13 82.0 199 29.1
PSO541G3269 Papaver somniferum HOM05D003210 ORTHO05D000001 4.3e-13 81.3 169 29.6
Hma1.2p1_1825F.1_g304380 Hydrangea macrophylla HOM05D003210 ORTHO05D000001 9.6e-13 80.1 156 34.0
PSO675G6229 Papaver somniferum HOM05D003210 ORTHO05D000001 9.6e-13 80.1 169 30.2
CsaV3_6G031450 Cucumis sativus L. HOM05D003210 ORTHO05D000001 1.3e-12 79.7 200 26.0
Hma1.2p1_0133F.1_g061410 Hydrangea macrophylla HOM05D003210 ORTHO05D000001 1.3e-12 79.7 156 34.0
PGR102G2337 Punica granatum HOM05D003210 ORTHO05D000001 2.8e-12 78.6 162 29.0
Eucgr.H02438 Eucalyptus grandis HOM05D003210 ORTHO05D000001 8.1e-12 77.0 157 30.6
GSVIVG01030055001 Vitis vinifera HOM05D003210 ORTHO05D000001 8.1e-12 77.0 191 29.8
CiPaw.12G072400 Carya illinoinensis HOM05D003210 ORTHO05D000001 1.4e-11 76.3 184 26.6
Oeu040467.2 Olea europaea HOM05D003210 ORTHO05D000001 1.4e-11 76.3 189 27.5
CANSAT01G1059 Cannabis sativa HOM05D003210 ORTHO05D000001 1.8e-11 75.9 197 27.4
MD09G1122300 Malus domestica HOM05D003210 ORTHO05D000001 2.4e-11 75.5 151 27.8
PSO541G2059 Papaver somniferum HOM05D003210 ORTHO05D000001 3.1e-11 75.1 190 33.2
HPP92_009567 Vanilla planifolia HOM05D003210 ORTHO05D000001 3.1e-11 75.1 161 28.0
CDE02G4398 Ceratophyllum demersum HOM05D003210 ORTHO05D000001 4.0e-11 74.7 199 26.6
MD08G1245900 Malus domestica HOM05D003210 ORTHO05D000001 4.0e-11 74.7 172 27.9
MD15G1441200 Malus domestica HOM05D003210 ORTHO05D000001 5.3e-11 74.3 166 28.3
Prupe.1G583300 Prunus persica HOM05D003210 ORTHO05D000001 5.3e-11 74.3 163 28.2
Prupe.3G201200 Prunus persica HOM05D003210 ORTHO05D000001 5.3e-11 74.3 151 29.1
Peaxi162Scf00776g00227 Petunia axillaris HOM05D003210 ORTHO05D000001 6.9e-11 73.9 146 29.5
FAN14G2019 Fragaria x ananassa HOM05D003210 ORTHO05D000001 9.0e-11 73.6 156 25.6
GSVIVG01038280001 Vitis vinifera HOM05D003210 ORTHO05D000001 9.0e-11 73.6 167 24.6
Nitab4.5_0011940g0010 Nicotiana tabacum HOM05D003210 ORTHO05D000001 1.2e-10 73.2 146 29.5
Phvul.008G101600 Phaseolus vulgaris HOM05D003210 ORTHO05D000001 2.0e-10 72.4 165 27.9
Solyc07g047820.3 Solanum lycopersicum HOM05D003210 ORTHO05D000001 2.0e-10 72.4 193 26.9
AL8G43160 Arabidopsis lyrata HOM05D003210 ORTHO05D000001 2.6e-10 72.0 168 28.6
MBI19_g25583_MAGBIO Magnolia biondii HOM05D003210 ORTHO05D000001 2.6e-10 72.0 164 28.7
Aqoxy6G00832 Aquilegia oxysepala HOM05D003210 ORTHO05D000001 4.5e-10 71.2 213 26.8
AT5G65560 Arabidopsis thaliana HOM05D003210 ORTHO05D000001 4.5e-10 71.2 166 28.9
Haze_07989 Corylus avellana HOM05D003210 ORTHO05D000001 4.5e-10 71.2 141 28.4
FvH4_6g41080 Fragaria vesca HOM05D003210 ORTHO05D000001 4.5e-10 71.2 156 25.0
Atru.chr4.1465 Acer truncatum HOM05D003210 ORTHO05D000001 5.8e-10 70.9 167 30.5
Cfa012658 Carpinus fangiana HOM05D003210 ORTHO05D000001 5.8e-10 70.9 145 27.6
RcHm_v2.0_Chr2g0156641 Rosa chinensis HOM05D003210 ORTHO05D000001 5.8e-10 70.9 154 25.3
Sopen07g024250 Solanum pennellii HOM05D003210 ORTHO05D000001 9.9e-10 70.1 190 26.8
CiPaw.08G142200 Carya illinoinensis HOM05D003210 ORTHO05D000001 1.3e-09 69.7 215 27.4
CAN.G1397.6 Capsicum annuum HOM05D003210 ORTHO05D000001 1.7e-09 69.3 190 26.3
VMungo1383G3073 Vigna mungo HOM05D003210 ORTHO05D000001 1.7e-09 69.3 165 27.3
Thecc.01G191200 Theobroma cacao HOM05D003210 ORTHO05D000001 2.2e-09 68.9 161 27.3
TWI74G0121 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 3.8e-09 68.2 205 24.4
CSS0019582 Camellia sinensis var. sinensis HOM05D003210 ORTHO05D000001 4.9e-09 67.8 134 31.3
FAN09G1124 Fragaria x ananassa HOM05D003210 ORTHO05D000001 6.4e-09 67.4 176 26.1
Rhsim06G0174500 Rhododendron simsii HOM05D003210 ORTHO05D000001 6.4e-09 67.4 154 33.8
SGA_v2.0_scaffold181G39678 Striga asiatica HOM05D003210 ORTHO05D000001 6.4e-09 67.4 145 29.7
RcHm_v2.0_Chr2g0092171 Rosa chinensis HOM05D003210 ORTHO05D000001 8.4e-09 67.0 162 28.4
Sc06g0009870 Simmondsia chinensis HOM05D003210 ORTHO05D000001 8.4e-09 67.0 170 28.8
vmacro12101 Vaccinium macrocarpon HOM05D003210 ORTHO05D000001 8.4e-09 67.0 159 32.7
Carub.0002s2422 Capsella rubella HOM05D003210 ORTHO05D000001 1.1e-08 66.6 162 26.5
Sopen10g032390 Solanum pennellii HOM05D003210 ORTHO05D000001 1.1e-08 66.6 163 29.4
Ciclev10018770m.g Citrus clementina HOM05D003210 ORTHO05D000001 1.4e-08 66.2 166 27.7
Migut.H02282 Erythranthe guttata HOM05D003210 ORTHO05D000001 2.4e-08 65.5 167 29.9
PGSC0003DMG400023572 Solanum tuberosum HOM05D003210 ORTHO05D000001 2.4e-08 65.5 164 28.7
MSTRG.6643 Avicennia marina HOM05D003210 ORTHO05D000001 3.2e-08 65.1 147 27.9
Sed0013166 Sechium edule HOM05D003210 ORTHO05D000001 3.2e-08 65.1 151 25.8
Carub.0008s2641 Capsella rubella HOM05D003210 ORTHO05D000001 4.2e-08 64.7 168 26.2
Lj3C22T6 Lonicera japonica HOM05D003210 ORTHO05D000001 5.5e-08 64.3 161 26.7
SEGI_31076 Sequoiadendron giganteum HOM05D003210 ORTHO05D000001 5.5e-08 64.3 157 30.6
Solyc10g081880.3 Solanum lycopersicum HOM05D003210 ORTHO05D000001 5.5e-08 64.3 215 27.9
CSS0039883 Camellia sinensis var. sinensis HOM05D003210 ORTHO05D000001 7.1e-08 63.9 131 30.5
HanXRQChr03g0075201 Helianthus annuus HOM05D003210 ORTHO05D000001 9.3e-08 63.5 158 24.1
THA.LOC104819041 Tarenaya hassleriana HOM05D003210 ORTHO05D000001 9.3e-08 63.5 181 26.0
Ciclev10014182m.g Citrus clementina HOM05D003210 ORTHO05D000001 1.6e-07 62.8 160 25.0
VMungo1215G2034 Vigna mungo HOM05D003210 ORTHO05D000001 2.1e-07 62.4 238 22.3
HanXRQChr06g0169331 Helianthus annuus HOM05D003210 ORTHO05D000001 2.7e-07 62.0 199 22.6
SalBow7G0399 Salvia bowleyana HOM05D003210 ORTHO05D000001 3.5e-07 61.6 147 27.9
PGSC0003DMG401028232 Solanum tuberosum HOM05D003210 ORTHO05D000001 3.5e-07 61.6 154 28.6
SGA_v2.0_scaffold181G39736 Striga asiatica HOM05D003210 ORTHO05D000001 3.5e-07 61.6 198 26.8
Lsat_1_v5_gn_7_6901 Lactuca sativa HOM05D003210 ORTHO05D000001 4.6e-07 61.2 162 25.9
MD03G1170600 Malus domestica HOM05D003210 ORTHO05D000001 6.0e-07 60.8 166 25.9
Sc16g0000610 Simmondsia chinensis HOM05D003210 ORTHO05D000001 6.0e-07 60.8 187 25.7
Oeu017113.2 Olea europaea HOM05D000258 ORTHO05D000001 7.9e-07 60.5 157 27.4
FAN19G0968 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.0e-06 60.1 150 26.7
TWI53G0425 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 1.0e-06 60.1 200 23.0
FvH4_1g06430 Fragaria vesca HOM05D003210 ORTHO05D000001 1.3e-06 59.7 150 26.7
Manes.12G061200 Manihot esculenta HOM05D003210 ORTHO05D000001 1.8e-06 59.3 166 21.7
PGR142G4479 Punica granatum HOM05D003210 ORTHO05D000001 1.8e-06 59.3 192 21.9
FvH4_2g11090 Fragaria vesca HOM05D003210 ORTHO05D000001 2.3e-06 58.9 169 24.3
Dinv19149 Davidia involucrata HOM05D008810 ORTHO05D010971 5.1e-06 57.8 58 51.7
Dinv28839 Davidia involucrata HOM05D008810 ORTHO05D010971 5.1e-06 57.8 58 51.7
FAN24G1052 Fragaria x ananassa HOM05D003210 ORTHO05D000001 5.1e-06 57.8 169 23.7
SHI21874 Sapria himalayana HOM05D003210 ORTHO05D000001 5.1e-06 57.8 168 25.6
Sp2g28660 Schrenkiella parvula HOM05D003210 ORTHO05D000001 5.1e-06 57.8 160 25.6
CARHR279540 Cardamine hirsuta HOM05D003210 ORTHO05D000001 6.7e-06 57.4 173 23.7
FvH4_7g04271 Fragaria vesca HOM05D003210 ORTHO05D000001 6.7e-06 57.4 167 26.3
Potri.006G124900 Populus trichocarpa HOM05D003210 ORTHO05D000001 8.7e-06 57.0 163 28.2
HPP92_001177 Vanilla planifolia HOM05D003210 ORTHO05D000001 8.7e-06 57.0 160 24.4


User provided reference genes

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