Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0661G117 Amborella trichopoda HOM05D005963 ORTHO05D006869 2.4e-278 961.4 460 100.0
Nn6g34339 Nelumbo nucifera HOM05D005963 ORTHO05D006869 4.7e-157 558.5 466 58.4
GSVIVG01018456001 Vitis vinifera HOM05D005963 ORTHO05D006869 8.0e-157 557.8 466 57.3
CiPaw.03G099400 Carya illinoinensis HOM05D005963 ORTHO05D006869 4.0e-156 555.4 466 57.9
Dinv28513 Davidia involucrata HOM05D005963 ORTHO05D006869 4.0e-156 555.4 455 58.5
Cc02_g03640 Coffea canephora HOM05D005963 ORTHO05D006869 5.2e-156 555.1 467 56.5
Haze_13797 Corylus avellana HOM05D005963 ORTHO05D006869 8.8e-156 554.3 463 57.7
CSS0028871 Camellia sinensis var. sinensis HOM05D005963 ORTHO05D006869 4.4e-155 552.0 462 56.9
Oeu030146.1 Olea europaea HOM05D005963 ORTHO05D006869 1.3e-154 550.4 464 56.2
TAR374G1343 Trochodendron aralioides HOM05D005963 ORTHO05D006869 1.3e-154 550.4 462 57.1
CDE08G0260 Ceratophyllum demersum HOM05D005963 ORTHO05D006869 2.2e-154 549.7 454 55.3
Oeu030148.1 Olea europaea HOM05D005963 ORTHO05D006869 4.9e-154 548.5 464 56.2
Dinv35132 Davidia involucrata HOM05D005963 ORTHO05D006869 1.1e-153 547.4 463 57.0
Manes.06G140900 Manihot esculenta HOM05D005963 ORTHO05D006869 1.2e-152 543.9 467 56.5
CiPaw.04G064800 Carya illinoinensis HOM05D005963 ORTHO05D006869 3.5e-152 542.3 466 57.5
Hma1.2p1_0488F.1_g163860 Hydrangea macrophylla HOM05D005963 ORTHO05D006869 3.5e-152 542.3 463 56.4
Potri.012G132300 Populus trichocarpa HOM05D005963 ORTHO05D006869 5.9e-152 541.6 469 56.9
Ciclev10004233m.g Citrus clementina HOM05D005963 ORTHO05D006869 7.7e-152 541.2 480 55.2
Sabra12G0099600 Salix brachista HOM05D005963 ORTHO05D006869 6.6e-151 538.1 467 57.6
CAN.G1257.1 Capsicum annuum HOM05D005963 ORTHO05D006869 1.5e-150 537.0 468 56.0
PSO478G0110 Papaver somniferum HOM05D005963 ORTHO05D006869 1.5e-150 537.0 462 55.6
QL12p038851 Quercus lobata HOM05D005963 ORTHO05D006869 4.3e-150 535.4 480 54.8
PGSC0003DMG400007557 Solanum tuberosum HOM05D005963 ORTHO05D006869 4.3e-150 535.4 467 55.7
PSO782G2761 Papaver somniferum HOM05D005963 ORTHO05D006869 5.6e-150 535.0 462 55.4
Duzib205G1443 Durio zibethinus HOM05D005963 ORTHO05D006869 2.8e-149 532.7 469 55.9
Peaxi162Scf00192g00613 Petunia axillaris HOM05D005963 ORTHO05D006869 2.8e-149 532.7 468 56.0
PGR142G0011 Punica granatum HOM05D005963 ORTHO05D006869 2.8e-149 532.7 464 55.6
Actinidia13537 Actinidia chinensis HOM05D005963 ORTHO05D006869 6.1e-149 531.6 463 56.4
Solyc03g006900.2 Solanum lycopersicum HOM05D005963 ORTHO05D006869 6.1e-149 531.6 468 56.0
SHI13839 Sapria himalayana HOM05D005963 ORTHO05D006869 1.0e-148 530.8 464 54.7
SEGI_31852 Sequoiadendron giganteum HOM05D005963 ORTHO05D006869 1.0e-148 530.8 450 54.9
Thecc.03G166100 Theobroma cacao HOM05D005963 ORTHO05D006869 1.0e-148 530.8 470 55.3
vmacro22547 Vaccinium macrocarpon HOM05D005963 ORTHO05D006869 1.0e-148 530.8 467 54.4
Cpa.g.sc4.183 Carica papaya HOM05D005963 ORTHO05D006869 1.4e-148 530.4 468 56.2
COL.COLO4_14220 Corchorus olitorius HOM05D005963 ORTHO05D006869 1.4e-148 530.4 469 55.2
Rhsim03G0174100 Rhododendron simsii HOM05D005963 ORTHO05D006869 1.8e-148 530.0 461 55.7
Aqoxy7G00515 Aquilegia oxysepala HOM05D005963 ORTHO05D006869 2.3e-148 529.6 458 54.6
Nitab4.5_0000124g0020 Nicotiana tabacum HOM05D005963 ORTHO05D006869 2.3e-148 529.6 469 55.0
Sopen03g002900 Solanum pennellii HOM05D005963 ORTHO05D006869 6.8e-148 528.1 466 55.8
TWI14G0479 Tripterygium wilfordii HOM05D005963 ORTHO05D006869 6.8e-148 528.1 467 54.6
DCAR_018136 Daucus carota HOM05D005963 ORTHO05D006869 1.2e-147 527.3 463 54.6
Actinidia25056 Actinidia chinensis HOM05D005963 ORTHO05D006869 3.4e-147 525.8 460 56.7
Eucgr.K00183 Eucalyptus grandis HOM05D005963 ORTHO05D006869 1.7e-146 523.5 480 54.4
Gohir.A07G040200 Gossypium hirsutum HOM05D005963 ORTHO05D006869 2.2e-146 523.1 469 55.0
Gorai.001G047400 Gossypium raimondii HOM05D005963 ORTHO05D006869 3.7e-146 522.3 469 55.0
Nitab4.5_0000371g0030 Nicotiana tabacum HOM05D005963 ORTHO05D006869 4.9e-146 521.9 469 54.2
Lsat_1_v5_gn_9_53261 Lactuca sativa HOM05D005963 ORTHO05D006869 8.3e-146 521.2 474 53.8
ECA232G0907 Erigeron canadensis HOM05D005963 ORTHO05D006869 2.4e-145 519.6 474 54.0
Duzib068G1175 Durio zibethinus HOM05D005963 ORTHO05D006869 4.6e-144 515.4 468 53.8
Gohir.D07G044301 Gossypium hirsutum HOM05D005963 ORTHO05D006869 7.8e-144 514.6 463 54.9
MD01G1192000 Malus domestica HOM05D005963 ORTHO05D006869 7.8e-144 514.6 473 54.3
Gorai.008G282200 Gossypium raimondii HOM05D005963 ORTHO05D006869 1.3e-143 513.8 467 53.5
Gohir.A12G262600 Gossypium hirsutum HOM05D005963 ORTHO05D006869 3.0e-143 512.7 467 53.3
Gohir.D12G263300 Gossypium hirsutum HOM05D005963 ORTHO05D006869 3.9e-143 512.3 467 53.5
Prupe.2G286400 Prunus persica HOM05D005963 ORTHO05D006869 4.3e-142 508.8 470 53.4
MD00G1003400 Malus domestica HOM05D005963 ORTHO05D006869 1.2e-141 507.3 473 53.3
HanXRQChr15g0486261 Helianthus annuus HOM05D005963 ORTHO05D006869 3.6e-141 505.8 477 52.4
VMungo0464G1720 Vigna mungo HOM05D005963 ORTHO05D006869 1.7e-138 496.9 469 52.7
HanXRQChr14g0433491 Helianthus annuus HOM05D005963 ORTHO05D006869 3.7e-138 495.7 466 52.4
Phvul.004G124000 Phaseolus vulgaris HOM05D005963 ORTHO05D006869 1.4e-137 493.8 467 52.7
Glyma.09G149700 Glycine max HOM05D005963 ORTHO05D006869 3.2e-137 492.7 468 53.4
MELO3C006856.2 Cucumis melo HOM05D005963 ORTHO05D006869 5.4e-137 491.9 478 50.8
arahy.Tifrunner.gnm1.ann1.R4K09I Arachis hypogaea HOM05D005963 ORTHO05D006869 5.0e-135 485.3 479 51.6
arahy.Tifrunner.gnm1.ann1.G2RQNR Arachis hypogaea HOM05D005963 ORTHO05D006869 1.9e-134 483.4 476 51.5
FAN06G4856 Fragaria x ananassa HOM05D005963 ORTHO05D006869 7.3e-134 481.5 478 50.8
FAN06G2356 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.2e-133 480.7 478 50.8
THA.LOC104825083 Tarenaya hassleriana HOM05D005963 ORTHO05D006869 2.1e-133 479.9 473 50.3
FAN01G2646 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.8e-133 479.6 478 50.8
RcHm_v2.0_Chr1g0376121 Rosa chinensis HOM05D005963 ORTHO05D006869 3.6e-133 479.2 476 50.8
Sed0018627 Sechium edule HOM05D005963 ORTHO05D006869 6.2e-133 478.4 471 50.7
AUR62016071 Chenopodium quinoa HOM05D005963 ORTHO05D006869 1.4e-132 477.2 475 50.3
FvH4_7g28640 Fragaria vesca HOM05D005963 ORTHO05D006869 3.1e-132 476.1 478 50.4
Lj2g0022710 Lotus japonicus HOM05D005963 ORTHO05D006869 3.1e-132 476.1 483 49.7
AUR62021279 Chenopodium quinoa HOM05D005963 ORTHO05D006869 2.0e-131 473.4 480 51.5
FAN03G0518 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.6e-131 473.0 478 49.6
Hund04676 Selenicereus undatus HOM05D005963 ORTHO05D006869 2.4e-129 466.5 485 50.5
ClCG05G007670 Citrullus lanatus HOM05D005963 ORTHO05D006869 5.4e-129 465.3 478 50.0
CsaV3_3G016590 Cucumis sativus L. HOM05D005963 ORTHO05D006869 2.3e-127 459.9 479 48.4
Lj8C34G2 Lonicera japonica HOM05D005963 ORTHO05D006869 4.3e-126 455.7 421 53.4
EL10Ac3g05753 Beta vulgaris HOM05D005963 ORTHO05D006869 1.2e-125 454.1 486 48.6
Thhalv10015853m.g Eutrema salsugineum HOM05D005963 ORTHO05D006869 4.7e-125 452.2 475 49.1
CARHR264680 Cardamine hirsuta HOM05D005963 ORTHO05D006869 1.4e-124 450.7 480 48.1
AL8G26090 Arabidopsis lyrata HOM05D005963 ORTHO05D006869 3.1e-124 449.5 473 48.0
Ah.13g067680 Amaranthus hybridus HOM05D005963 ORTHO05D006869 4.0e-124 449.1 497 49.1
Medtr0007s0220 Medicago truncatula HOM05D005963 ORTHO05D006869 4.0e-124 449.1 475 48.8
TPR.G26590 Trifolium pratense HOM05D005963 ORTHO05D006869 6.8e-124 448.4 471 48.4
BolC2t08150H Brassica oleracea HOM05D005963 ORTHO05D006869 1.5e-123 447.2 481 47.6
A10p09630 Brassica napus HOM05D005963 ORTHO05D006869 2.6e-123 446.4 472 48.3
BraA10t43044Z Brassica rapa HOM05D005963 ORTHO05D006869 2.6e-123 446.4 472 48.3
A02p12120 Brassica napus HOM05D005963 ORTHO05D006869 5.8e-123 445.3 481 47.4
BraA02t06276Z Brassica rapa HOM05D005963 ORTHO05D006869 5.8e-123 445.3 481 47.4
Lalb_Chr19g0131211 Lupinus albus HOM05D005963 ORTHO05D006869 9.9e-123 444.5 462 48.9
Psat1g106960 Pisum sativum HOM05D005963 ORTHO05D006869 9.9e-123 444.5 477 48.0
BolC9t56999H Brassica oleracea HOM05D005963 ORTHO05D006869 1.3e-122 444.1 472 47.9
AT5G51800 Arabidopsis thaliana HOM05D005963 ORTHO05D006869 1.7e-122 443.7 483 47.6
Carub.0008s1182 Capsella rubella HOM05D005963 ORTHO05D006869 2.2e-122 443.4 483 47.0
C02p20220 Brassica napus HOM05D005963 ORTHO05D006869 1.9e-121 440.3 481 47.2
Sp6g14050 Schrenkiella parvula HOM05D005963 ORTHO05D006869 3.2e-121 439.5 482 47.5
EL10Ac7g16401 Beta vulgaris HOM05D005963 ORTHO05D006869 3.5e-120 436.0 482 48.1
BcaB08g35527 Brassica carinata HOM05D005963 ORTHO05D006869 1.9e-118 430.3 472 47.0
Sc25g0000220 Simmondsia chinensis HOM05D005963 ORTHO05D006869 9.6e-118 427.9 491 45.8
FAN10G3242 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.2e-117 427.6 478 47.3
BcaC04g20635 Brassica carinata HOM05D005963 ORTHO05D006869 1.5e-115 420.6 470 46.2
BcaC03g14575 Brassica carinata HOM05D005963 ORTHO05D006869 1.7e-111 407.1 480 44.8
FAN03G0902 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.9e-105 387.1 398 48.5
Aa31LG3G8240 Aethionema arabicum HOM05D005963 ORTHO05D006869 4.2e-105 386.0 392 50.5
Atru.chr1.580 Acer truncatum HOM05D005963 ORTHO05D006869 3.8e-98 362.8 323 52.9
PGSC0003DMG400007558 Solanum tuberosum HOM05D005963 ORTHO05D006869 1.6e-51 208.0 291 39.2
MBI05_g12587_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 1.1e-44 185.3 150 58.7
Pp3c18_1570 Physcomitrium patens HOM05D005963 ORTHO05D006869 2.0e-43 181.0 375 32.8
Pp3c2_90 Physcomitrium patens HOM05D005963 ORTHO05D006869 2.0e-43 181.0 373 32.4
Pp3c26_6160 Physcomitrium patens HOM05D005963 ORTHO05D006869 3.5e-43 180.3 375 32.5
Pp3c26_6250 Physcomitrium patens HOM05D005963 ORTHO05D006869 3.5e-43 180.3 375 32.5
MBI05_g12586_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 3.4e-38 163.7 181 48.1
SMO174G0009 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 1.6e-35 154.8 391 27.1
C09p41240 Brassica napus HOM05D005963 ORTHO05D006869 2.3e-34 151.0 173 43.9
SMO358G0565 Selaginella moellendorffii HOM05D001046 ORTHO05D007174 1.4e-31 141.7 407 29.2
SMO276G0013 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 7.5e-30 136.0 311 29.6
Ca_05417_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 3.0e-26 124.0 146 47.3
SMO116G0123 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 6.6e-26 122.9 484 26.2
SMO195G0003 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 8.0e-24 115.9 448 25.9
Ca_30119_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 3.9e-18 97.1 118 46.6
SMO268G0015 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 2.5e-17 94.4 428 22.9
Cre01.g041800 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 6.4e-13 79.7 333 23.7
Cre08.g380452 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 2.7e-11 74.3 331 23.3
Cre02.g095117 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 3.6e-08 63.9 298 23.8


User provided reference genes

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