Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G269 Amborella trichopoda HOM05D005281 ORTHO05D013988 1.6e-107 392.9 222 100.0
Lj1C137G10 Lonicera japonica HOM05D005281 ORTHO05D006351 2.7e-09 66.6 194 29.9
AUR62001645 Chenopodium quinoa HOM05D005281 ORTHO05D006351 3.5e-09 66.2 195 31.3
Nn2g11502 Nelumbo nucifera HOM05D005281 ORTHO05D006351 4.6e-09 65.9 181 30.4
Os01g0225100 Oryza sativa ssp. japonica HOM05D013050 ORTHO05D013988 1.0e-08 64.7 179 31.3
Migut.N00784 Erythranthe guttata HOM05D005281 ORTHO05D006351 2.3e-08 63.5 191 30.9
Aa31LG11G480 Aethionema arabicum HOM05D005281 ORTHO05D006351 3.0e-08 63.2 191 29.8
Sc21g0006330 Simmondsia chinensis HOM05D005281 ORTHO05D006351 3.0e-08 63.2 199 31.2
TAR633G1154 Trochodendron aralioides HOM05D005281 ORTHO05D006351 3.0e-08 63.2 201 27.9
Actinidia23889 Actinidia chinensis HOM05D005281 ORTHO05D006351 3.9e-08 62.8 196 29.1
EL10Ac7g16168 Beta vulgaris HOM05D005281 ORTHO05D006351 6.7e-08 62.0 194 29.4
Rhsim01G0236400 Rhododendron simsii HOM05D005281 ORTHO05D006351 1.9e-07 60.5 190 29.5
BcaC03g14078 Brassica carinata HOM05D005281 ORTHO05D006351 2.5e-07 60.1 197 27.4
A02p07560 Brassica napus HOM05D005281 ORTHO05D006351 3.3e-07 59.7 197 27.9
BraA02t05834Z Brassica rapa HOM05D005281 ORTHO05D006351 3.3e-07 59.7 197 27.9
AUR62020131 Chenopodium quinoa HOM05D005281 ORTHO05D006351 3.3e-07 59.7 185 30.3
MD11G1074600 Malus domestica HOM05D005281 ORTHO05D006351 4.3e-07 59.3 183 33.9
Hund04860 Selenicereus undatus HOM05D005281 ORTHO05D006351 4.3e-07 59.3 185 31.4
Zm00001eb119510 Zea mays HOM05D005281 ORTHO05D006351 5.6e-07 58.9 179 30.7
QL01p038286 Quercus lobata HOM05D005281 ORTHO05D006351 7.4e-07 58.5 203 27.1
COL.COLO4_19159 Corchorus olitorius HOM05D005281 ORTHO05D006351 1.3e-06 57.8 193 29.5
AL8G35000 Arabidopsis lyrata HOM05D005281 ORTHO05D006351 1.6e-06 57.4 200 29.0
Gohir.A07G104200 Gossypium hirsutum HOM05D005281 ORTHO05D006351 1.6e-06 57.4 202 29.2
CANSAT54G2372 Cannabis sativa HOM05D005281 ORTHO05D006351 2.8e-06 56.6 193 29.0
CARHR272630 Cardamine hirsuta HOM05D005281 ORTHO05D006351 2.8e-06 56.6 198 26.3
MD03G1070600 Malus domestica HOM05D005281 ORTHO05D006351 2.8e-06 56.6 203 27.1
Carub.0008s1934 Capsella rubella HOM05D005281 ORTHO05D006351 3.6e-06 56.2 195 26.2
CiPaw.14G059500 Carya illinoinensis HOM05D005281 ORTHO05D006351 4.8e-06 55.8 185 31.4
Dinv14436 Davidia involucrata HOM05D005281 ORTHO05D006351 6.2e-06 55.5 181 33.1
Thhalv10013268m.g Eutrema salsugineum HOM05D005281 ORTHO05D006351 6.2e-06 55.5 199 25.1
AT5G58720 Arabidopsis thaliana HOM05D005281 ORTHO05D006351 8.1e-06 55.1 189 30.2
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 8.1e-06 55.1 202 30.2
Prupe.6G057400 Prunus persica HOM05D005281 ORTHO05D006351 8.1e-06 55.1 185 34.6


User provided reference genes

Program Settings