Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G038 Amborella trichopoda HOM05D007735 ORTHO05D009638 9.7e-59 229.9 117 100.0
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 1.7e-10 69.7 107 49.5
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.1e-09 67.0 88 51.1
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 7.1e-09 64.3 96 51.0
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 7.1e-09 64.3 112 46.4
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 7.1e-09 64.3 116 40.5
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 9.2e-09 63.9 108 42.6
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 1.2e-08 63.5 106 44.3
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 1.2e-08 63.5 98 46.9
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 1.6e-08 63.2 109 39.4
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 2.1e-08 62.8 108 44.4
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 2.7e-08 62.4 110 42.7
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 2.7e-08 62.4 93 51.6
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 3.5e-08 62.0 95 50.5
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 4.6e-08 61.6 108 40.7
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 1.0e-07 60.5 109 42.2
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 1.0e-07 60.5 96 49.0
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.0e-07 60.5 96 49.0
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 1.0e-07 60.5 111 39.6
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 1.3e-07 60.1 98 44.9
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 1.7e-07 59.7 97 46.4
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.7e-07 59.7 121 43.0
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 2.3e-07 59.3 110 44.5
CiPaw.07G000500 Carya illinoinensis HOM05D007735 ORTHO05D009638 2.3e-07 59.3 79 50.6
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 2.3e-07 59.3 96 44.8
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 3.0e-07 58.9 108 44.4
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 3.0e-07 58.9 108 43.5
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 3.9e-07 58.5 108 43.5
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 5.1e-07 58.2 108 41.7
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 5.1e-07 58.2 103 41.7
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 6.6e-07 57.8 110 40.0
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 6.6e-07 57.8 105 40.0
ClCG10G000110 Citrullus lanatus HOM05D007735 ORTHO05D009638 1.1e-06 57.0 94 44.7
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 1.5e-06 56.6 110 40.9
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 1.9e-06 56.2 108 41.7
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 3.3e-06 55.5 111 41.4
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 3.3e-06 55.5 108 39.8
HPP92_018900 Vanilla planifolia HOM05D026889 ORTHO05D009638 3.3e-06 55.5 94 45.7
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 4.3e-06 55.1 105 41.9
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 5.6e-06 54.7 104 39.4
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 7.3e-06 54.3 92 46.7
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 7.3e-06 54.3 99 42.4
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 7.3e-06 54.3 95 42.1
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 7.3e-06 54.3 111 43.2
HPP92_018844 Vanilla planifolia HOM05D026889 ORTHO05D009638 7.3e-06 54.3 94 45.7
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 9.5e-06 53.9 35 77.1
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 9.5e-06 53.9 104 41.3
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 9.5e-06 53.9 95 40.0


User provided reference genes

Program Settings