Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0602G161 Amborella trichopoda HOM05D005115 ORTHO05D005703 3.3e-167 591.7 301 100.0
SalBow6G1704 Salvia bowleyana HOM05D005115 ORTHO05D005703 2.2e-22 110.5 279 37.6
SalBow8G0540 Salvia bowleyana HOM05D005115 ORTHO05D005703 2.2e-22 110.5 279 37.6
MBI07_g07104_MAGBIO Magnolia biondii HOM05D005115 ORTHO05D005703 9.3e-21 105.1 145 49.7
MBI06_g08472_MAGBIO Magnolia biondii HOM05D005115 ORTHO05D005703 1.2e-20 104.8 271 35.8
vmacro11350 Vaccinium macrocarpon HOM05D005115 ORTHO05D005703 3.9e-19 99.8 257 38.1
Os08g0374200 Oryza sativa ssp. japonica HOM05D005115 ORTHO05D005703 5.1e-19 99.4 117 55.6
Sc22g0004980 Simmondsia chinensis HOM05D005115 ORTHO05D005703 5.1e-19 99.4 262 35.1
Glyma.11G017800 Glycine max HOM05D005115 ORTHO05D005703 6.7e-19 99.0 268 36.2
TAR375G0477 Trochodendron aralioides HOM05D005115 ORTHO05D005703 8.7e-19 98.6 294 34.0
HPP92_002918 Vanilla planifolia HOM05D005115 ORTHO05D005703 1.1e-18 98.2 122 50.8
VMungo1215G1874 Vigna mungo HOM05D005115 ORTHO05D005703 1.5e-18 97.8 268 36.2
CDE04G3646 Ceratophyllum demersum HOM05D005115 ORTHO05D005703 2.5e-18 97.1 260 33.5
Haze_09072 Corylus avellana HOM05D005115 ORTHO05D005703 4.3e-18 96.3 278 35.3
CSS0002161 Camellia sinensis var. sinensis HOM05D005115 ORTHO05D005703 5.6e-18 95.9 128 50.0
Glyma.01G225300 Glycine max HOM05D005115 ORTHO05D005703 5.6e-18 95.9 268 36.6
CSS0007380 Camellia sinensis var. sinensis HOM05D005115 ORTHO05D005703 7.4e-18 95.5 125 51.2
TAR636G3146 Trochodendron aralioides HOM05D005115 ORTHO05D005703 7.4e-18 95.5 140 45.0
Hma1.2p1_0440F.1_g153350 Hydrangea macrophylla HOM05D005115 ORTHO05D005703 9.6e-18 95.1 248 33.9
TAR375G0257 Trochodendron aralioides HOM05D005115 ORTHO05D005703 9.6e-18 95.1 274 34.3
CsaV3_4G006640 Cucumis sativus L. HOM05D005115 ORTHO05D005703 1.6e-17 94.4 124 50.8
Dinv37526 Davidia involucrata HOM05D005115 ORTHO05D005703 2.1e-17 94.0 264 34.5
ClCG07G011580 Citrullus lanatus HOM05D005115 ORTHO05D005703 2.8e-17 93.6 121 52.1
EL10Ac5g12921 Beta vulgaris HOM05D005115 ORTHO05D005703 3.7e-17 93.2 272 35.3
Phvul.002G164100 Phaseolus vulgaris HOM05D005115 ORTHO05D005703 3.7e-17 93.2 268 35.1
Solyc08g008350.3 Solanum lycopersicum HOM05D005115 ORTHO05D005703 3.7e-17 93.2 255 33.7
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 6.2e-17 92.4 274 33.9
Duzib084G1297 Durio zibethinus HOM05D005115 ORTHO05D005703 6.2e-17 92.4 275 34.9
Nn3g19002 Nelumbo nucifera HOM05D005115 ORTHO05D005703 6.2e-17 92.4 293 33.1
GSVIVG01019540001 Vitis vinifera HOM05D005115 ORTHO05D005703 8.1e-17 92.0 119 50.4
Medtr8g099425 Medicago truncatula HOM05D005115 ORTHO05D005703 1.4e-16 91.3 134 44.8
PGR042G1877 Punica granatum HOM05D005115 ORTHO05D005703 1.8e-16 90.9 121 54.5
Thecc.03G298900 Theobroma cacao HOM05D005115 ORTHO05D005703 4.0e-16 89.7 269 34.6
Duzib068G0330 Durio zibethinus HOM05D005115 ORTHO05D005703 6.9e-16 89.0 264 35.2
Sed0016945 Sechium edule HOM05D005115 ORTHO05D005703 6.9e-16 89.0 272 34.6
Zm00001eb178470 Zea mays HOM05D005115 ORTHO05D005703 6.9e-16 89.0 110 50.9
Aqoxy7G00093 Aquilegia oxysepala HOM05D005115 ORTHO05D005703 9.0e-16 88.6 129 49.6
arahy.Tifrunner.gnm1.ann1.M14U5A Arachis hypogaea HOM05D005115 ORTHO05D005703 9.0e-16 88.6 268 35.1
Peaxi162Scf00102g01844 Petunia axillaris HOM05D005115 ORTHO05D005703 9.0e-16 88.6 129 47.3
Zm00001eb042700 Zea mays HOM05D005115 ORTHO05D005703 9.0e-16 88.6 110 49.1
arahy.Tifrunner.gnm1.ann1.V4I9JE Arachis hypogaea HOM05D005115 ORTHO05D005703 1.2e-15 88.2 256 35.2
Gohir.A09G190300 Gossypium hirsutum HOM05D005115 ORTHO05D005703 4.5e-15 86.3 264 33.0
Cc08_g16140 Coffea canephora HOM05D005115 ORTHO05D005703 5.8e-15 85.9 261 33.7
Hund11387 Selenicereus undatus HOM05D005115 ORTHO05D005703 7.6e-15 85.5 288 32.3
Aa31LG9G11140 Aethionema arabicum HOM05D005115 ORTHO05D005703 9.9e-15 85.1 283 31.1
CiPaw.11G120600 Carya illinoinensis HOM05D005115 ORTHO05D005703 1.3e-14 84.7 123 48.8
Gohir.D09G185000 Gossypium hirsutum HOM05D005115 ORTHO05D005703 1.3e-14 84.7 264 33.0
Prupe.5G120800 Prunus persica HOM05D005115 ORTHO05D005703 1.7e-14 84.3 108 50.9
AUR62010847 Chenopodium quinoa HOM05D000034 ORTHO05D005703 2.2e-14 84.0 260 34.2
Oeu055028.2 Olea europaea HOM05D005115 ORTHO05D005703 2.2e-14 84.0 263 34.2
Rhsim02G0244500 Rhododendron simsii HOM05D005115 ORTHO05D005703 2.9e-14 83.6 282 34.4
TWI81G0084 Tripterygium wilfordii HOM05D005115 ORTHO05D005703 2.9e-14 83.6 108 51.9
MSTRG.25681 Avicennia marina HOM05D005115 ORTHO05D005703 3.8e-14 83.2 108 52.8
AUR62019846 Chenopodium quinoa HOM05D005115 ORTHO05D005703 4.9e-14 82.8 119 46.2
Psat7g026000 Pisum sativum HOM05D005115 ORTHO05D005703 6.4e-14 82.4 120 48.3
TWI15G1136 Tripterygium wilfordii HOM05D005115 ORTHO05D005703 6.4e-14 82.4 264 34.1
Atru.chr9.1972 Acer truncatum HOM05D005115 ORTHO05D005703 8.4e-14 82.0 245 33.5
Atru.chr9.1986 Acer truncatum HOM05D005115 ORTHO05D005703 8.4e-14 82.0 245 33.5
Sopen08g004230 Solanum pennellii HOM05D005115 ORTHO05D005703 8.4e-14 82.0 115 46.1
PGSC0003DMG400005793 Solanum tuberosum HOM05D005115 ORTHO05D005703 8.4e-14 82.0 115 47.0
CANSAT21G0870 Cannabis sativa HOM05D005115 ORTHO05D005703 1.1e-13 81.6 111 47.7
Cfa011998 Carpinus fangiana HOM05D005115 ORTHO05D005703 1.1e-13 81.6 122 47.5
Ca_17482_v3 Cicer arietinum L. HOM05D005115 ORTHO05D005703 1.1e-13 81.6 265 31.7
Ca_17506_v3 Cicer arietinum L. HOM05D005115 ORTHO05D005703 1.1e-13 81.6 265 31.7
Gorai.006G207500 Gossypium raimondii HOM05D005115 ORTHO05D005703 1.1e-13 81.6 277 31.0
Duzib205G0660 Durio zibethinus HOM05D005115 ORTHO05D005703 1.4e-13 81.3 273 32.6
Cpa.g.sc79.29 Carica papaya HOM05D005115 ORTHO05D005703 1.9e-13 80.9 271 32.8
unitig_0.g2839 Utricularia gibba HOM05D005115 ORTHO05D005703 1.9e-13 80.9 140 40.7
CAN.G792.37 Capsicum annuum HOM05D005115 ORTHO05D005703 2.5e-13 80.5 124 44.4
Migut.A00633 Erythranthe guttata HOM05D005115 ORTHO05D005703 2.5e-13 80.5 111 48.6
SEGI_32593 Sequoiadendron giganteum HOM05D005115 ORTHO05D005703 3.2e-13 80.1 258 34.9
LjContig00312_ERROPOS870357g0004531 Lotus japonicus HOM05D005115 ORTHO05D005703 5.5e-13 79.3 275 33.1
TPR.G3414 Trifolium pratense HOM05D005115 ORTHO05D005703 5.5e-13 79.3 267 32.2
CiPaw.12G082200 Carya illinoinensis HOM05D005115 ORTHO05D005703 7.1e-13 79.0 121 44.6
FvH4_5g04680 Fragaria vesca HOM05D005115 ORTHO05D005703 9.3e-13 78.6 107 47.7
Nitab4.5_0002231g0060 Nicotiana tabacum HOM05D005115 ORTHO05D005703 9.3e-13 78.6 288 30.6
PGR031G1480 Punica granatum HOM05D005115 ORTHO05D005703 2.1e-12 77.4 107 54.2
Hund14216 Selenicereus undatus HOM05D005115 ORTHO05D005703 2.1e-12 77.4 272 31.6
COL.COLO4_10710 Corchorus olitorius HOM05D005115 ORTHO05D005703 2.7e-12 77.0 108 47.2
FAN13G0546 Fragaria x ananassa HOM05D005115 ORTHO05D005703 2.7e-12 77.0 107 47.7
FAN13G3196 Fragaria x ananassa HOM05D005115 ORTHO05D005703 2.7e-12 77.0 107 47.7
Gohir.D11G024900 Gossypium hirsutum HOM05D005115 ORTHO05D005703 2.7e-12 77.0 261 33.3
FAN18G1353 Fragaria x ananassa HOM05D005115 ORTHO05D005703 3.5e-12 76.6 264 33.0
Gohir.A11G025300 Gossypium hirsutum HOM05D005115 ORTHO05D005703 3.5e-12 76.6 261 33.3
Nitab4.5_0007367g0090 Nicotiana tabacum HOM05D005115 ORTHO05D005703 3.5e-12 76.6 287 30.3
HanXRQChr13g0415351 Helianthus annuus HOM05D005115 ORTHO05D005703 4.6e-12 76.3 100 51.0
ECA240G1127 Erigeron canadensis HOM05D005115 ORTHO05D005703 6.0e-12 75.9 264 29.9
Gorai.007G026700 Gossypium raimondii HOM05D005115 ORTHO05D005703 7.9e-12 75.5 261 33.3
Potri.003G140700 Populus trichocarpa HOM05D005115 ORTHO05D005703 7.9e-12 75.5 260 34.6
Sed0001802 Sechium edule HOM05D005115 ORTHO05D005703 7.9e-12 75.5 107 48.6
Eucgr.D01748 Eucalyptus grandis HOM05D005115 ORTHO05D005703 1.8e-11 74.3 243 34.6
ECA240G3401 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.3e-11 73.9 263 31.9
Lsat_1_v5_gn_6_83921 Lactuca sativa HOM05D005115 ORTHO05D005703 2.3e-11 73.9 274 32.8
Sabra03G0101600 Salix brachista HOM05D000906 ORTHO05D000713 3.9e-11 73.2 288 31.2
MELO3C016298.2 Cucumis melo HOM05D005115 ORTHO05D005703 5.1e-11 72.8 270 31.1
PSO135G0387 Papaver somniferum HOM05D005115 ORTHO05D005703 1.5e-10 71.2 292 33.6
PSO384G2123 Papaver somniferum HOM05D005115 ORTHO05D005703 1.5e-10 71.2 293 32.8
Sabra01G0067300 Salix brachista HOM05D005115 ORTHO05D005703 1.9e-10 70.9 264 32.6
Manes.02G009400 Manihot esculenta HOM05D005115 ORTHO05D005703 3.3e-10 70.1 120 44.2
Actinidia22166 Actinidia chinensis HOM05D005115 ORTHO05D005703 4.3e-10 69.7 90 50.0
CDE03G0211 Ceratophyllum demersum HOM05D005115 ORTHO05D005703 4.3e-10 69.7 225 32.0
HanXRQChr03g0083441 Helianthus annuus HOM05D005115 ORTHO05D005703 4.3e-10 69.7 258 30.2
THA.LOC104815118 Tarenaya hassleriana HOM05D005115 ORTHO05D005703 9.6e-10 68.6 282 30.9
BcaB01g02726 Brassica carinata HOM05D005115 ORTHO05D005703 4.8e-09 66.2 127 43.3
AT4G10970 Arabidopsis thaliana HOM05D005115 ORTHO05D005703 8.2e-09 65.5 125 40.8
Thhalv10028955m.g Eutrema salsugineum HOM05D005115 ORTHO05D005703 8.2e-09 65.5 294 29.9
CARHR255630 Cardamine hirsuta HOM05D005115 ORTHO05D005703 1.4e-08 64.7 290 29.0
Potri.001G090900 Populus trichocarpa HOM05D005115 ORTHO05D005703 3.1e-08 63.5 261 30.3
C03p35310 Brassica napus HOM05D005115 ORTHO05D005703 1.2e-07 61.6 126 39.7
AagrBONN_evm.TU.Sc2ySwM_344.5012 Anthoceros agrestis HOM05D028980 ORTHO05D026613 2.0e-07 60.8 101 41.6
Carub.0006s2972 Capsella rubella HOM05D005115 ORTHO05D005703 2.0e-07 60.8 287 27.5
Sp6g06500 Schrenkiella parvula HOM05D005115 ORTHO05D005703 2.6e-07 60.5 102 42.2
BcaC01g04648 Brassica carinata HOM05D005115 ORTHO05D005703 3.4e-07 60.1 290 29.0
MD06G1108200 Malus domestica HOM05D005115 ORTHO05D005703 3.4e-07 60.1 89 44.9
SHI06967 Sapria himalayana HOM05D005115 ORTHO05D005703 3.4e-07 60.1 109 43.1
RcHm_v2.0_Chr7g0194701 Rosa chinensis HOM05D005115 ORTHO05D005703 4.5e-07 59.7 89 44.9
BolC3t15841H Brassica oleracea HOM05D005115 ORTHO05D005703 7.6e-07 58.9 118 39.8
Sp7g21880 Schrenkiella parvula HOM05D005115 ORTHO05D005703 1.3e-06 58.2 107 38.3
AL6G45070 Arabidopsis lyrata HOM05D005115 ORTHO05D005703 1.7e-06 57.8 128 39.8
SGA_v2.0_scaffold144G35858 Striga asiatica HOM05D005474 ORTHO05D006551 1.7e-06 57.8 103 38.8
BcaNung01098 Brassica carinata HOM05D005115 ORTHO05D005703 8.4e-06 55.5 111 36.0
BraA01t01460Z Brassica rapa HOM05D005115 ORTHO05D005703 8.4e-06 55.5 108 36.1
Thhalv10026287m.g Eutrema salsugineum HOM05D005115 ORTHO05D005703 8.4e-06 55.5 106 41.5


User provided reference genes

Program Settings