Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0585G019 Amborella trichopoda HOM05D006512 ORTHO05D008027 0.0e+00 1625.1 1015 100.0
TAR626G0449 Trochodendron aralioides HOM05D006512 ORTHO05D008027 1.7e-130 471.5 710 44.5
MBI07_g09094_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 3.0e-124 450.7 771 43.1
Nn1g07218 Nelumbo nucifera HOM05D006512 ORTHO05D008027 2.8e-122 444.1 714 44.1
Haze_09710 Corylus avellana HOM05D006512 ORTHO05D008027 2.3e-119 434.5 723 42.9
CSS0043474 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 3.3e-118 430.6 659 44.0
CiPaw.12G131800 Carya illinoinensis HOM05D006512 ORTHO05D008027 1.3e-114 418.7 637 45.7
vmacro02216 Vaccinium macrocarpon HOM05D006512 ORTHO05D008027 1.7e-114 418.3 664 43.5
Ciclev10007420m.g Citrus clementina HOM05D006512 ORTHO05D008027 4.9e-114 416.8 639 44.0
Prupe.4G218000 Prunus persica HOM05D006512 ORTHO05D008027 7.0e-113 412.9 729 42.2
PSO541G1419 Papaver somniferum HOM05D006512 ORTHO05D008027 3.5e-112 410.6 645 44.0
Glyma.02G293200 Glycine max HOM05D006512 ORTHO05D008027 7.8e-112 409.5 692 42.5
Sabra16G0234800 Salix brachista HOM05D006512 ORTHO05D008027 7.8e-112 409.5 638 45.8
VMungo0647G0540 Vigna mungo HOM05D006512 ORTHO05D008027 1.0e-111 409.1 695 43.7
TPR.G1164 Trifolium pratense HOM05D006512 ORTHO05D008027 3.0e-111 407.5 693 42.6
Lj1C877G6 Lonicera japonica HOM05D006512 ORTHO05D008027 8.6e-111 406.0 726 41.3
Aqoxy1G03389_Aqoxy1G03390 Aquilegia oxysepala HOM05D006512 ORTHO05D008027 1.5e-110 405.2 659 43.1
Medtr5g093560 Medicago truncatula HOM05D006512 ORTHO05D008027 1.5e-110 405.2 688 42.2
TWI39G1152 Tripterygium wilfordii HOM05D006512 ORTHO05D008027 1.5e-110 405.2 726 41.9
Ah.06g182620 Amaranthus hybridus HOM05D006512 ORTHO05D008027 2.5e-110 404.4 725 39.4
Duzib213G0172 Durio zibethinus HOM05D006512 ORTHO05D008027 2.5e-110 404.4 643 43.5
Glyma.14G021200 Glycine max HOM05D006512 ORTHO05D008027 2.5e-110 404.4 690 41.7
Gohir.D05G372700 Gossypium hirsutum HOM05D006512 ORTHO05D008027 4.3e-110 403.7 640 44.2
CAN.G492.3 Capsicum annuum HOM05D006512 ORTHO05D008027 5.6e-110 403.3 643 43.7
arahy.Tifrunner.gnm1.ann1.WH2E03 Arachis hypogaea HOM05D006512 ORTHO05D008027 2.8e-109 401.0 637 44.4
arahy.Tifrunner.gnm1.ann1.DSL29X Arachis hypogaea HOM05D006512 ORTHO05D008027 4.7e-109 400.2 643 44.2
Atru.chr2.3489 Acer truncatum HOM05D006512 ORTHO05D008027 1.8e-108 398.3 655 43.5
FAN11G0896 Fragaria x ananassa HOM05D006512 ORTHO05D008027 2.3e-108 397.9 635 44.6
Nitab4.5_0001393g0060 Nicotiana tabacum HOM05D006512 ORTHO05D008027 1.2e-107 395.6 683 43.2
Sopen10g002210 Solanum pennellii HOM05D006512 ORTHO05D008027 4.4e-107 393.7 722 40.6
PGSC0003DMG400014387 Solanum tuberosum HOM05D006512 ORTHO05D008027 2.4e-105 387.9 719 40.5
FAN21G3399 Fragaria x ananassa HOM05D006512 ORTHO05D008027 4.6e-104 383.6 658 43.3
Nitab4.5_0004829g0090 Nicotiana tabacum HOM05D006512 ORTHO05D008027 6.0e-104 383.3 704 41.9
Peaxi162Scf01615g00010 Petunia axillaris HOM05D006512 ORTHO05D008027 7.8e-104 382.9 639 44.0
SEGI_25925 Sequoiadendron giganteum HOM05D006512 ORTHO05D008027 2.5e-102 377.9 734 38.7
Thecc.07G032200 Theobroma cacao HOM05D006512 ORTHO05D008027 2.5e-102 377.9 640 42.0
Hund23227 Selenicereus undatus HOM05D006512 ORTHO05D008027 1.2e-101 375.6 742 38.3
ECA236G0056 Erigeron canadensis HOM05D006512 ORTHO05D008027 5.8e-99 366.7 660 39.2
RcHm_v2.0_Chr5g0040811 Rosa chinensis HOM05D006512 ORTHO05D008027 9.8e-99 365.9 746 38.7
EL10Ac4g07766 Beta vulgaris HOM05D006512 ORTHO05D008027 2.2e-98 364.8 649 40.8
FAN16G2871 Fragaria x ananassa HOM05D006512 ORTHO05D008027 2.9e-98 364.4 631 42.0
PGR083G0988 Punica granatum HOM05D006512 ORTHO05D008027 6.4e-98 363.2 558 43.4
AUR62020400 Chenopodium quinoa HOM05D006512 ORTHO05D008027 8.3e-98 362.8 634 41.2
Oeu024915.1 Olea europaea HOM05D006512 ORTHO05D008027 1.9e-97 361.7 713 38.0
HPP92_009832 Vanilla planifolia HOM05D006512 ORTHO05D008027 3.2e-97 360.9 685 40.3
Cpa.g.sc12.276 Carica papaya HOM05D006512 ORTHO05D008027 4.6e-96 357.1 600 43.8
FAN25G1139 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.7e-95 355.1 661 41.1
FAN25G2516 Fragaria x ananassa HOM05D006512 ORTHO05D008027 6.6e-95 353.2 664 41.1
AUR62015819 Chenopodium quinoa HOM05D006512 ORTHO05D008027 8.6e-95 352.8 722 37.3
THA.LOC104811621 Tarenaya hassleriana HOM05D006512 ORTHO05D008027 3.3e-94 350.9 621 41.5
Actinidia32260 Actinidia chinensis HOM05D006512 ORTHO05D008027 5.6e-94 350.1 641 40.7
Lsat_1_v5_gn_7_111120 Lactuca sativa HOM05D006512 ORTHO05D008027 2.8e-93 347.8 622 39.4
Phvul.008G270300 Phaseolus vulgaris HOM05D006512 ORTHO05D008027 8.9e-92 342.8 561 43.7
Migut.H01809 Erythranthe guttata HOM05D006512 ORTHO05D008027 1.5e-91 342.0 658 39.7
Os01g0698100 Oryza sativa ssp. japonica HOM05D006512 ORTHO05D008027 4.4e-91 340.5 778 35.5
A02p09890 Brassica napus HOM05D006512 ORTHO05D008027 1.2e-88 332.4 681 39.1
C02p16450 Brassica napus HOM05D006512 ORTHO05D008027 7.8e-88 329.7 677 39.1
COL.COLO4_09692 Corchorus olitorius HOM05D006512 ORTHO05D008027 1.0e-87 329.3 606 39.8
CANSAT11G0281 Cannabis sativa HOM05D006512 ORTHO05D008027 3.0e-87 327.8 579 41.8
BcaC03g14267 Brassica carinata HOM05D006512 ORTHO05D008027 5.1e-87 327.0 677 38.8
BolC2t07744H Brassica oleracea HOM05D006512 ORTHO05D008027 1.9e-86 325.1 679 38.7
Potri.001G356800 Populus trichocarpa HOM05D006512 ORTHO05D008027 2.5e-86 324.7 578 43.3
PSO675G4144 Papaver somniferum HOM05D006512 ORTHO05D008027 9.6e-86 322.8 504 45.2
Aa31LG5G12080 Aethionema arabicum HOM05D006512 ORTHO05D008027 8.9e-84 316.2 669 38.0
Carub.0008s1539 Capsella rubella HOM05D006512 ORTHO05D008027 8.9e-84 316.2 709 37.7
BcaB05g22180 Brassica carinata HOM05D006512 ORTHO05D008027 9.9e-83 312.8 643 38.3
SGA_v2.0_scaffold172G39010 Striga asiatica HOM05D006512 ORTHO05D008027 4.9e-82 310.5 739 35.3
AL8G30600 Arabidopsis lyrata HOM05D006512 ORTHO05D008027 6.4e-82 310.1 680 38.2
LjContig00272g0012578 Lotus japonicus HOM05D006512 ORTHO05D008027 1.9e-81 308.5 495 44.0
Manes.03G133700 Manihot esculenta HOM05D006512 ORTHO05D008027 2.4e-81 308.1 475 45.5
Thhalv10015403m.g Eutrema salsugineum HOM05D006512 ORTHO05D008027 9.3e-81 306.2 709 37.5
DCAR_022584 Daucus carota HOM05D006512 ORTHO05D008027 1.2e-80 305.8 718 35.2
QL08p009135 Quercus lobata HOM05D006512 ORTHO05D008027 1.6e-80 305.4 544 41.2
BraA02t06053Z Brassica rapa HOM05D006512 ORTHO05D008027 7.8e-80 303.1 708 36.9
Solyc10g006260.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 3.0e-79 301.2 577 39.3
FvH4_3g23160 Fragaria vesca HOM05D006512 ORTHO05D008027 6.6e-79 300.1 486 45.1
Ca_06341_v3 Cicer arietinum L. HOM05D006512 ORTHO05D008027 1.5e-78 298.9 514 44.2
Gorai.009G441100 Gossypium raimondii HOM05D006512 ORTHO05D008027 1.9e-78 298.5 485 42.5
Gohir.A04G013500 Gossypium hirsutum HOM05D006512 ORTHO05D008027 1.3e-77 295.8 482 43.4
Oeu041836.1 Olea europaea HOM05D006512 ORTHO05D008027 2.6e-75 288.1 515 41.2
CSS0048002 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 4.5e-75 287.3 500 41.0
CDE04G1000 Ceratophyllum demersum HOM05D006512 ORTHO05D008027 6.4e-74 283.5 633 37.0
unitig_899.g15285 Utricularia gibba HOM05D006512 ORTHO05D008027 2.7e-72 278.1 695 34.5
Duzib170G0430 Durio zibethinus HOM05D006512 ORTHO05D008027 1.8e-71 275.4 474 41.8
Sc03g0008470 Simmondsia chinensis HOM05D006512 ORTHO05D008027 5.1e-71 273.9 496 41.9
Eucgr.F00738 Eucalyptus grandis HOM05D006512 ORTHO05D008027 1.4e-68 265.8 524 40.5
HanXRQChr11g0335931 Helianthus annuus HOM05D006512 ORTHO05D008027 1.0e-63 249.6 484 37.8
Actinidia05076 Actinidia chinensis HOM05D006512 ORTHO05D008027 1.8e-63 248.8 359 44.8
SHI26585 Sapria himalayana HOM05D006512 ORTHO05D008027 2.3e-63 248.4 771 30.6
Actinidia26683 Actinidia chinensis HOM05D006512 ORTHO05D008027 1.9e-62 245.4 346 45.7
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 1.1e-60 239.6 784 31.8
MD11G1213200 Malus domestica HOM05D006512 ORTHO05D008027 2.6e-59 235.0 486 39.3
Rhsim06G0220200 Rhododendron simsii HOM05D006512 ORTHO05D008027 3.5e-56 224.6 356 43.0
Sp6g17030 Schrenkiella parvula HOM05D006512 ORTHO05D008027 1.0e-55 223.0 525 37.1
Lalb_Chr17g0348651 Lupinus albus HOM05D006512 ORTHO05D008027 2.1e-53 215.3 472 38.8
MBI07_g37843_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 1.8e-52 212.2 424 35.8
Psat2g014000 Pisum sativum HOM05D006512 ORTHO05D008027 2.4e-52 211.8 500 37.6
GSVIVG01037687001 Vitis vinifera HOM05D006512 ORTHO05D008027 1.2e-51 209.5 327 44.3
Dinv40780 Davidia involucrata HOM05D006512 ORTHO05D008027 8.5e-50 203.4 281 48.0
AT5G55100 Arabidopsis thaliana HOM05D006512 ORTHO05D008027 8.2e-37 160.2 444 35.8
Zm00001eb360910 Zea mays HOM05D006512 ORTHO05D008027 1.1e-33 149.8 476 29.6
Cc05_g14000 Coffea canephora HOM05D006512 ORTHO05D008027 3.2e-33 148.3 287 37.6
GSVIVG01037689001 Vitis vinifera HOM05D006512 ORTHO05D008027 1.5e-22 112.8 147 48.3
Cc05_g14010 Coffea canephora HOM05D006512 ORTHO05D008027 9.7e-22 110.2 146 45.2
QL08p009130 Quercus lobata HOM05D006512 ORTHO05D008027 4.8e-21 107.8 148 44.6
CARHR268440 Cardamine hirsuta HOM05D006512 ORTHO05D008027 6.3e-21 107.5 150 44.7
HanXRQChr11g0335921 Helianthus annuus HOM05D006512 ORTHO05D008027 6.3e-21 107.5 147 44.2
Eucgr.F00737 Eucalyptus grandis HOM05D006512 ORTHO05D008027 5.0e-18 97.8 151 43.7
Lalb_Chr17g0348641 Lupinus albus HOM05D006512 ORTHO05D008027 8.5e-18 97.1 154 42.2
MD11G1213100 Malus domestica HOM05D006512 ORTHO05D008027 8.5e-18 97.1 153 43.1
Solyc10g006250.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 1.9e-17 95.9 146 45.9
CANSAT56G4300 Cannabis sativa HOM05D006512 ORTHO05D008027 1.3e-13 83.2 141 42.6
CBR_g49368 Chara braunii HOM05D000019 ORTHO05D000048 2.2e-13 82.4 151 41.1
Cre11.g481700 Chlamydomonas reinhardtii HOM05D006512 ORTHO05D008027 1.3e-10 73.2 116 37.1
PRCOL_00002654 Prasinoderma coloniale HOM05D002594 ORTHO05D003499 9.8e-06 57.0 55 40.0


User provided reference genes

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