Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 1.6e-71 272.7 141 100.0
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.6e-28 129.8 122 64.8
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 1.2e-26 123.6 141 58.2
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 2.0e-26 122.9 141 57.4
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 3.8e-25 118.6 146 54.8
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 8.5e-25 117.5 122 57.4
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 1.4e-24 116.7 122 60.7
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 4.2e-24 115.2 131 60.3
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 5.5e-24 114.8 130 62.3
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.6e-23 113.2 132 57.6
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 2.7e-23 112.5 116 60.3
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 4.6e-23 111.7 141 53.9
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 6.1e-23 111.3 117 63.2
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 6.1e-23 111.3 130 57.7
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 7.9e-23 110.9 141 53.9
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.0e-22 110.5 146 56.2
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 1.8e-22 109.8 107 64.5
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 1.8e-22 109.8 128 56.2
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 1.8e-22 109.8 131 56.5
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 1.8e-22 109.8 120 59.2
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 5.1e-22 108.2 131 57.3
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 6.7e-22 107.8 91 69.2
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 8.8e-22 107.5 122 54.9
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 8.8e-22 107.5 106 63.2
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 8.8e-22 107.5 107 64.5
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 1.1e-21 107.1 118 56.8
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 1.5e-21 106.7 94 69.1
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 2.0e-21 106.3 124 57.3
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 2.6e-21 105.9 98 61.2
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 2.6e-21 105.9 100 64.0
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 2.6e-21 105.9 122 60.7
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 2.6e-21 105.9 117 59.8
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 4.4e-21 105.1 144 53.5
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 5.7e-21 104.8 134 54.5
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 5.7e-21 104.8 122 58.2
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 9.7e-21 104.0 144 53.5
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 9.7e-21 104.0 98 70.4
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 9.7e-21 104.0 88 69.3
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 1.3e-20 103.6 117 61.5
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 1.3e-20 103.6 125 55.2
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 1.7e-20 103.2 101 63.4
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 2.2e-20 102.8 91 67.0
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 2.8e-20 102.4 120 60.8
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 2.8e-20 102.4 92 68.5
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 3.7e-20 102.1 111 52.3
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 4.8e-20 101.7 90 66.7
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.8e-20 101.7 108 62.0
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.8e-20 101.7 108 62.0
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 4.8e-20 101.7 108 63.9
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 6.3e-20 101.3 108 62.0
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 8.2e-20 100.9 108 61.1
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 8.2e-20 100.9 83 68.7
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 8.2e-20 100.9 87 69.0
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 1.1e-19 100.5 124 53.2
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 1.4e-19 100.1 90 65.6
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 1.8e-19 99.8 123 53.7
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 1.8e-19 99.8 108 61.1
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 1.8e-19 99.8 108 61.1
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.8e-19 99.8 118 59.3
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 2.4e-19 99.4 93 65.6
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 3.1e-19 99.0 103 58.3
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.1e-19 99.0 149 51.0
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 4.1e-19 98.6 108 60.2
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 4.1e-19 98.6 108 60.2
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 4.1e-19 98.6 78 71.8
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 4.1e-19 98.6 117 60.7
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 5.3e-19 98.2 71 76.1
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 5.3e-19 98.2 110 59.1
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 6.9e-19 97.8 85 70.6
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 6.9e-19 97.8 145 51.0
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 6.9e-19 97.8 89 64.0
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 6.9e-19 97.8 107 60.7
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 9.1e-19 97.4 144 52.1
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 9.1e-19 97.4 110 57.3
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 9.1e-19 97.4 148 52.0
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 9.1e-19 97.4 91 65.9
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.2e-18 97.1 91 64.8
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.2e-18 97.1 109 62.4
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.2e-18 97.1 91 63.7
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 2.0e-18 96.3 128 57.8
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 2.0e-18 96.3 117 58.1
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 2.6e-18 95.9 127 52.8
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 3.4e-18 95.5 130 51.5
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 3.4e-18 95.5 130 51.5
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 3.4e-18 95.5 145 51.0
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 3.4e-18 95.5 125 56.8
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 4.5e-18 95.1 85 68.2
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 5.9e-18 94.7 85 67.1
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 7.7e-18 94.4 130 51.5
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 1.0e-17 94.0 91 63.7
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.0e-17 94.0 90 58.9
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 1.0e-17 94.0 58 86.2
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 1.7e-17 93.2 85 64.7
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 2.2e-17 92.8 147 49.0
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 2.2e-17 92.8 92 58.7
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 2.2e-17 92.8 89 59.6
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 2.2e-17 92.8 58 84.5
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 2.2e-17 92.8 92 58.7
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 5.0e-17 91.7 56 83.9
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 5.0e-17 91.7 155 47.1
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 6.5e-17 91.3 111 55.9
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 8.5e-17 90.9 109 54.1
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 8.5e-17 90.9 109 54.1
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 8.5e-17 90.9 92 57.6
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 1.1e-16 90.5 92 57.6
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 1.4e-16 90.1 111 58.6
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 2.5e-16 89.4 58 77.6
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 7.2e-16 87.8 95 49.5
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 7.2e-16 87.8 99 52.5
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.1e-15 86.3 121 51.2
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 2.3e-14 82.8 53 81.1
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 7.4e-13 77.8 97 56.7
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 3.7e-12 75.5 101 51.5
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 3.7e-12 75.5 63 73.0
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 3.7e-12 75.5 63 73.0
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 6.3e-12 74.7 102 49.0
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 1.8e-11 73.2 62 61.3
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 1.3e-09 67.0 46 73.9
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 5.0e-09 65.1 67 56.7
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 1.9e-08 63.2 48 77.1
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 9.4e-08 60.8 69 55.1
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 2.1e-07 59.7 144 41.0
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.4e-06 57.0 138 37.7
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 2.3e-06 56.2 60 50.0
Cfa020782 Carpinus fangiana HOM05D006256 ORTHO05D007833 3.0e-06 55.8 95 42.1


User provided reference genes

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