Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0326G034 Amborella trichopoda HOM05D005681 ORTHO05D068436 6.3e-60 233.8 109 100.0
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 4.1e-19 98.2 55 78.2
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 3.5e-10 68.6 126 39.7
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 3.9e-09 65.1 51 56.9
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 8.6e-09 63.9 52 53.8
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 1.1e-08 63.5 53 56.6
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 1.5e-08 63.2 59 52.5
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 1.5e-08 63.2 52 53.8
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 1.5e-08 63.2 52 55.8
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.5e-08 63.2 57 49.1
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 4.3e-08 61.6 66 48.5
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 4.3e-08 61.6 51 54.9
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 4.3e-08 61.6 64 51.6
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 4.3e-08 61.6 53 52.8
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 4.3e-08 61.6 70 50.0
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 4.3e-08 61.6 59 50.8
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 4.3e-08 61.6 77 39.0
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 4.3e-08 61.6 65 50.8
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 5.6e-08 61.2 52 50.0
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 5.6e-08 61.2 52 55.8
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 5.6e-08 61.2 59 52.5
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 7.3e-08 60.8 52 51.9
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 7.3e-08 60.8 54 53.7
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 7.3e-08 60.8 55 54.5
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 7.3e-08 60.8 55 50.9
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 9.5e-08 60.5 53 49.1
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 9.5e-08 60.5 55 54.5
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 9.5e-08 60.5 55 54.5
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 9.5e-08 60.5 57 49.1
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 9.5e-08 60.5 60 50.0
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 9.5e-08 60.5 55 50.9
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.2e-07 60.1 60 41.7
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.2e-07 60.1 66 48.5
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.2e-07 60.1 55 49.1
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 2.1e-07 59.3 67 47.8
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 2.8e-07 58.9 61 45.9
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 2.8e-07 58.9 54 51.9
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 2.8e-07 58.9 53 50.9
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 3.6e-07 58.5 51 52.9
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 3.6e-07 58.5 56 46.4
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 4.7e-07 58.2 59 44.1
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 4.7e-07 58.2 54 48.1
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 4.7e-07 58.2 54 51.9
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 4.7e-07 58.2 53 45.3
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 6.2e-07 57.8 65 47.7
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 6.2e-07 57.8 65 47.7
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 6.2e-07 57.8 59 44.1
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 6.2e-07 57.8 64 50.0
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 6.2e-07 57.8 64 50.0
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 6.2e-07 57.8 64 50.0
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 6.2e-07 57.8 55 49.1
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 6.2e-07 57.8 53 49.1
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 8.0e-07 57.4 59 44.1
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 8.0e-07 57.4 65 47.7
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 1.1e-06 57.0 64 50.0
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 1.1e-06 57.0 64 50.0
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 1.1e-06 57.0 60 51.7
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 1.1e-06 57.0 53 50.9
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.4e-06 56.6 50 52.0
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 1.8e-06 56.2 60 45.0
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 2.3e-06 55.8 54 50.0
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 3.1e-06 55.5 62 45.2
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 3.1e-06 55.5 60 48.3
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 4.0e-06 55.1 67 44.8
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 5.2e-06 54.7 65 47.7
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 5.2e-06 54.7 54 50.0
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 6.8e-06 54.3 53 50.9
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 6.8e-06 54.3 56 44.6
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 8.9e-06 53.9 51 47.1


User provided reference genes

Program Settings