Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0026G021 Amborella trichopoda HOM05D004528 ORTHO05D005815 7.1e-72 273.9 141 100.0
Nn6g35452 Nelumbo nucifera HOM05D004528 ORTHO05D005815 1.3e-60 236.5 131 90.8
MBI01_g09956_MAGBIO Magnolia biondii HOM05D004528 ORTHO05D005815 1.6e-60 236.1 129 90.7
CiPaw.03G217000 Carya illinoinensis HOM05D004528 ORTHO05D005815 2.1e-60 235.7 139 85.6
GSVIVG01015212001 Vitis vinifera HOM05D004528 ORTHO05D005815 2.1e-60 235.7 131 88.5
VMungo1215G0680 Vigna mungo HOM05D004528 ORTHO05D005815 3.6e-60 235.0 140 85.0
Thecc.09G090300 Theobroma cacao HOM05D004528 ORTHO05D005815 4.8e-60 234.6 131 88.5
Migut.J00603 Erythranthe guttata HOM05D004528 ORTHO05D005815 6.2e-60 234.2 139 84.9
Dinv36760 Davidia involucrata HOM05D004528 ORTHO05D005815 8.1e-60 233.8 140 84.3
Hma1.2p1_0800F.1_g220090 Hydrangea macrophylla HOM05D004528 ORTHO05D005815 8.1e-60 233.8 138 84.1
Hma1.2p1_0800F.1_g220100 Hydrangea macrophylla HOM05D004528 ORTHO05D005815 8.1e-60 233.8 138 84.1
Rhsim05G0022000 Rhododendron simsii HOM05D004528 ORTHO05D005815 8.1e-60 233.8 141 82.3
FAN28G2769 Fragaria x ananassa HOM05D004528 ORTHO05D005815 1.1e-59 233.4 131 88.5
QL02p062827 Quercus lobata HOM05D004528 ORTHO05D005815 1.1e-59 233.4 130 89.2
RcHm_v2.0_Chr2g0093221 Rosa chinensis HOM05D004528 ORTHO05D005815 1.1e-59 233.4 139 84.2
SalBow6G2464 Salvia bowleyana HOM05D004528 ORTHO05D005815 1.1e-59 233.4 140 83.6
vmacro17227 Vaccinium macrocarpon HOM05D004528 ORTHO05D005815 1.1e-59 233.4 141 81.6
Ciclev10008462m.g Citrus clementina HOM05D004528 ORTHO05D005815 1.4e-59 233.0 131 87.0
Haze_25904 Corylus avellana HOM05D004528 ORTHO05D005815 1.8e-59 232.6 131 88.5
MSTRG.17774 Avicennia marina HOM05D004528 ORTHO05D005815 3.1e-59 231.9 139 83.5
TAR626G1836 Trochodendron aralioides HOM05D004528 ORTHO05D005815 3.1e-59 231.9 131 88.5
FAN23G0078 Fragaria x ananassa HOM05D004528 ORTHO05D005815 4.0e-59 231.5 131 87.8
arahy.Tifrunner.gnm1.ann1.A138U3 Arachis hypogaea HOM05D004528 ORTHO05D005815 5.3e-59 231.1 131 87.8
arahy.Tifrunner.gnm1.ann1.PT0GJ5 Arachis hypogaea HOM05D004528 ORTHO05D005815 5.3e-59 231.1 131 87.8
Cc06_g11330 Coffea canephora HOM05D004528 ORTHO05D005815 5.3e-59 231.1 131 86.3
DCAR_011978 Daucus carota HOM05D004528 ORTHO05D005815 5.3e-59 231.1 131 89.3
FvH4_1g07290 Fragaria vesca HOM05D004528 ORTHO05D005815 5.3e-59 231.1 139 83.5
FAN19G1322 Fragaria x ananassa HOM05D004528 ORTHO05D005815 5.3e-59 231.1 139 83.5
Oeu018425.1 Olea europaea HOM05D004528 ORTHO05D005815 5.3e-59 231.1 131 87.0
Phvul.003G137300 Phaseolus vulgaris HOM05D004528 ORTHO05D005815 5.3e-59 231.1 140 84.3
SEGI_06455 Sequoiadendron giganteum HOM05D004528 ORTHO05D005815 5.3e-59 231.1 139 82.0
CSS0033534 Camellia sinensis var. sinensis HOM05D004528 ORTHO05D005815 6.9e-59 230.7 140 82.1
COL.COLO4_18209 Corchorus olitorius HOM05D004528 ORTHO05D005815 6.9e-59 230.7 139 82.7
Glyma.13G103500 Glycine max HOM05D004528 ORTHO05D005815 6.9e-59 230.7 140 83.6
Lalb_Chr13g0299741 Lupinus albus HOM05D004528 ORTHO05D005815 6.9e-59 230.7 131 87.8
Duzib150G1454 Durio zibethinus HOM05D004528 ORTHO05D005815 9.0e-59 230.3 131 86.3
Manes.16G102700 Manihot esculenta HOM05D004528 ORTHO05D005815 9.0e-59 230.3 131 86.3
SGA_v2.0_scaffold62G21604 Striga asiatica HOM05D004528 ORTHO05D005815 9.0e-59 230.3 141 81.6
Aqoxy7G01232 Aquilegia oxysepala HOM05D004528 ORTHO05D005815 1.2e-58 229.9 131 88.5
Prupe.7G211100 Prunus persica HOM05D004528 ORTHO05D005815 1.5e-58 229.6 131 87.0
FAN26G1375 Fragaria x ananassa HOM05D004528 ORTHO05D005815 2.6e-58 228.8 131 87.0
FAN26G2732 Fragaria x ananassa HOM05D004528 ORTHO05D005815 2.6e-58 228.8 131 87.0
Gorai.010G082500 Gossypium raimondii HOM05D004528 ORTHO05D005815 4.5e-58 228.0 131 86.3
Eucgr.C00900 Eucalyptus grandis HOM05D004528 ORTHO05D005815 5.8e-58 227.6 131 84.7
ClCG11G001780 Citrullus lanatus HOM05D004528 ORTHO05D005815 7.6e-58 227.3 131 84.7
Glyma.17G055500 Glycine max HOM05D004528 ORTHO05D005815 7.6e-58 227.3 140 82.1
Potri.006G221700 Populus trichocarpa HOM05D004528 ORTHO05D005815 7.6e-58 227.3 131 85.5
Cpa.g.sc283.9 Carica papaya HOM05D004528 ORTHO05D005815 1.3e-57 226.5 129 86.8
Lj4g0008156 Lotus japonicus HOM05D004528 ORTHO05D005815 1.3e-57 226.5 131 88.5
ECA240G0155 Erigeron canadensis HOM05D004528 ORTHO05D005815 1.7e-57 226.1 131 83.2
MD02G1077700 Malus domestica HOM05D004528 ORTHO05D005815 2.9e-57 225.3 131 85.5
Sed0012435 Sechium edule HOM05D004528 ORTHO05D005815 2.9e-57 225.3 131 85.5
TWI34G0432 Tripterygium wilfordii HOM05D004528 ORTHO05D005815 2.9e-57 225.3 131 85.5
CsaV3_2G001490 Cucumis sativus L. HOM05D004528 ORTHO05D005815 3.8e-57 224.9 131 84.0
Lsat_1_v5_gn_7_37341 Lactuca sativa HOM05D004528 ORTHO05D005815 3.8e-57 224.9 131 82.4
Sabra06G0171200 Salix brachista HOM05D004528 ORTHO05D005815 3.8e-57 224.9 131 84.7
Lj7A674G30 Lonicera japonica HOM05D004528 ORTHO05D005815 4.9e-57 224.6 140 82.1
MD15G1206300 Malus domestica HOM05D004528 ORTHO05D005815 6.4e-57 224.2 131 85.5
CARHR109990 Cardamine hirsuta HOM05D004528 ORTHO05D005815 8.4e-57 223.8 131 84.0
MELO3C004622.2 Cucumis melo HOM05D004528 ORTHO05D005815 1.1e-56 223.4 135 82.2
Carub.0003s3385 Capsella rubella HOM05D004528 ORTHO05D005815 2.4e-56 222.2 139 79.9
BcaB08g34873 Brassica carinata HOM05D004528 ORTHO05D005815 3.2e-56 221.9 139 79.9
BcaC05g26001 Brassica carinata HOM05D004528 ORTHO05D005815 3.2e-56 221.9 139 80.6
BcaC06g36598 Brassica carinata HOM05D004528 ORTHO05D005815 3.2e-56 221.9 139 80.6
A07p01220 Brassica napus HOM05D004528 ORTHO05D005815 3.2e-56 221.9 139 80.6
C05p19590 Brassica napus HOM05D004528 ORTHO05D005815 3.2e-56 221.9 139 80.6
C07p02330 Brassica napus HOM05D004528 ORTHO05D005815 3.2e-56 221.9 139 80.6
BolC5t30662H Brassica oleracea HOM05D004528 ORTHO05D005815 3.2e-56 221.9 139 80.6
BolC7t40641H Brassica oleracea HOM05D004528 ORTHO05D005815 3.2e-56 221.9 139 80.6
BraA07t27910Z Brassica rapa HOM05D004528 ORTHO05D005815 3.2e-56 221.9 139 80.6
CANSAT56G0596 Cannabis sativa HOM05D004528 ORTHO05D005815 3.2e-56 221.9 131 83.2
CANSAT56G1313 Cannabis sativa HOM05D004528 ORTHO05D005815 3.2e-56 221.9 131 83.2
Medtr7g091650 Medicago truncatula HOM05D004528 ORTHO05D005815 3.2e-56 221.9 131 84.7
Thhalv10022707m.g Eutrema salsugineum HOM05D004528 ORTHO05D005815 4.2e-56 221.5 139 79.9
TPR.G3725 Trifolium pratense HOM05D004528 ORTHO05D005815 7.1e-56 220.7 131 84.0
CAN.G1208.1 Capsicum annuum HOM05D004528 ORTHO05D005815 1.6e-55 219.5 138 79.0
Solyc07g039210.4 Solanum lycopersicum HOM05D004528 ORTHO05D005815 1.6e-55 219.5 140 77.9
Sopen07g017560 Solanum pennellii HOM05D004528 ORTHO05D005815 1.6e-55 219.5 140 77.9
Nitab4.5_0011030g0010 Nicotiana tabacum HOM05D004528 ORTHO05D005815 3.5e-55 218.4 140 78.6
Psat3g072560 Pisum sativum HOM05D004528 ORTHO05D005815 3.5e-55 218.4 131 82.4
Sp3g32930 Schrenkiella parvula HOM05D004528 ORTHO05D005815 3.5e-55 218.4 139 78.4
AL3G48690 Arabidopsis lyrata HOM05D004528 ORTHO05D005815 4.6e-55 218.0 131 81.7
PGSC0003DMG400013151 Solanum tuberosum HOM05D004528 ORTHO05D005815 4.6e-55 218.0 140 78.6
unitig_748.g7306 Utricularia gibba HOM05D004528 ORTHO05D005815 3.0e-54 215.3 160 70.0
THA.LOC104820025 Tarenaya hassleriana HOM05D004528 ORTHO05D005815 3.9e-54 214.9 131 81.7
BcaB04g16932 Brassica carinata HOM05D004528 ORTHO05D005815 6.7e-54 214.2 131 82.4
HPP92_010493 Vanilla planifolia HOM05D004528 ORTHO05D005815 6.7e-54 214.2 141 75.2
AUR62027494 Chenopodium quinoa HOM05D004528 ORTHO05D005815 1.1e-53 213.4 125 85.6
AUR62033986 Chenopodium quinoa HOM05D004528 ORTHO05D005815 1.1e-53 213.4 136 79.4
Nitab4.5_0005634g0070 Nicotiana tabacum HOM05D004528 ORTHO05D005815 1.1e-53 213.4 146 76.0
Os09g0386400 Oryza sativa ssp. japonica HOM05D004528 ORTHO05D005815 1.1e-53 213.4 128 81.2
Aa31LG8G16570 Aethionema arabicum HOM05D004528 ORTHO05D005815 1.5e-53 213.0 132 79.5
PSO063G0639 Papaver somniferum HOM05D004528 ORTHO05D005815 1.5e-53 213.0 126 84.1
Zm00001eb311810 Zea mays HOM05D004528 ORTHO05D005815 1.9e-53 212.6 128 81.2
PGR142G0229 Punica granatum HOM05D004528 ORTHO05D005815 2.5e-53 212.2 138 77.5
AT2G19560 Arabidopsis thaliana HOM05D004528 ORTHO05D005815 3.3e-53 211.8 139 76.3
PSO832G3660 Papaver somniferum HOM05D004528 ORTHO05D005815 9.6e-53 210.3 126 82.5
Ca_08460_v3 Cicer arietinum L. HOM05D004528 ORTHO05D005815 2.1e-52 209.1 123 85.4
Ca_30052_v3 Cicer arietinum L. HOM05D004528 ORTHO05D005815 2.1e-52 209.1 123 85.4
Peaxi162Scf00709g00003 Petunia axillaris HOM05D004528 ORTHO05D005815 4.8e-52 208.0 146 74.0
BcaB03g16744 Brassica carinata HOM05D004528 ORTHO05D005815 6.2e-52 207.6 136 79.4
Mapoly0005s0151 Marchantia polymorpha HOM05D004528 ORTHO05D005815 2.4e-51 205.7 135 73.3
EL10Ac8g19227 Beta vulgaris HOM05D004528 ORTHO05D005815 3.4e-50 201.8 155 69.0
AagrBONN_evm.TU.Sc2ySwM_344.906 Anthoceros agrestis HOM05D004528 ORTHO05D005815 7.6e-50 200.7 131 73.3
SHI24590 Sapria himalayana HOM05D004528 ORTHO05D005815 3.5e-47 191.8 123 79.7
SMO117G0048 Selaginella moellendorffii HOM05D004528 ORTHO05D005815 8.7e-46 187.2 135 68.1
Pp3c17_12810 Physcomitrium patens HOM05D004528 ORTHO05D005815 1.9e-45 186.0 123 72.4
CARHR051760 Cardamine hirsuta HOM05D004528 ORTHO05D005815 2.8e-44 182.2 135 67.4
CARHR052830 Cardamine hirsuta HOM05D004528 ORTHO05D005815 2.8e-44 182.2 126 72.2
Actinidia25256 Actinidia chinensis HOM05D004528 ORTHO05D005815 2.4e-43 179.1 137 66.4
CDE02G2136 Ceratophyllum demersum HOM05D004528 ORTHO05D005815 7.1e-40 167.5 102 82.4
BcaB04g16933 Brassica carinata HOM05D004528 ORTHO05D005815 6.0e-39 164.5 133 65.4
CBR_g78884 Chara braunii HOM05D004528 ORTHO05D005815 1.4e-35 153.3 131 58.0
Gohir.D06G070800 Gossypium hirsutum HOM05D004528 ORTHO05D005815 2.0e-34 149.4 88 85.2
Gohir.A06G072200 Gossypium hirsutum HOM05D004528 ORTHO05D005815 1.3e-33 146.7 92 79.3
Sc18g0002070 Simmondsia chinensis HOM05D004528 ORTHO05D005815 5.5e-32 141.4 88 81.8
Ah.14g085220 Amaranthus hybridus HOM05D004528 ORTHO05D005815 1.2e-31 140.2 79 84.8
RcHm_v2.0_Chr7g0206721 Rosa chinensis HOM05D004528 ORTHO05D005815 7.4e-29 131.0 115 63.5
A07p01200 Brassica napus HOM05D004528 ORTHO05D005815 2.0e-26 122.9 83 77.1
PGSC0003DMG400022053 Solanum tuberosum HOM05D004528 ORTHO05D005815 7.2e-24 114.4 84 71.4
MCO16G315 Micromonas commoda HOM05D004528 ORTHO05D005815 1.0e-22 110.5 124 43.5
PRCOL_00001383 Prasinoderma coloniale HOM05D004528 ORTHO05D005815 8.8e-22 107.5 123 39.0
RcHm_v2.0_Chr7g0207111 Rosa chinensis HOM05D004528 ORTHO05D005815 7.4e-21 104.4 99 60.6
Cre02.g110400 Chlamydomonas reinhardtii HOM05D004528 ORTHO05D005815 4.8e-20 101.7 124 42.7
FAN23G1719 Fragaria x ananassa HOM05D004528 ORTHO05D005815 1.3e-17 93.6 51 84.3
CARHR054270 Cardamine hirsuta HOM05D004528 ORTHO05D005815 5.0e-17 91.7 65 73.8
RcHm_v2.0_Chr7g0207281 Rosa chinensis HOM05D004528 ORTHO05D005815 1.1e-13 80.5 54 79.6
CARHR054260 Cardamine hirsuta HOM05D004528 ORTHO05D005815 4.4e-13 78.6 54 68.5
CARHR122310 Cardamine hirsuta HOM05D004528 ORTHO05D005815 4.1e-11 72.0 42 81.0
RcHm_v2.0_Chr7g0230831 Rosa chinensis HOM05D004528 ORTHO05D005815 6.5e-09 64.7 38 81.6
BcaB03g16690 Brassica carinata HOM05D004528 ORTHO05D005815 6.7e-06 54.7 40 62.5
BcaC03g15601 Brassica carinata HOM05D004528 ORTHO05D032255 8.8e-06 54.3 102 42.2


User provided reference genes

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